CRAN Package Check Results for Package CpGassoc

Last updated on 2014-11-28 19:51:15.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.11 1.14 50.38 51.52 NOTE
r-devel-linux-x86_64-debian-gcc 2.11 1.02 50.70 51.72 NOTE
r-devel-linux-x86_64-fedora-clang 2.11 101.38 NOTE
r-devel-linux-x86_64-fedora-gcc 2.11 103.12 NOTE
r-devel-osx-x86_64-clang 2.11 82.30 NOTE
r-devel-windows-ix86+x86_64 2.11 3.00 70.00 73.00 NOTE
r-patched-linux-x86_64 2.11 1.07 50.06 51.13 NOTE
r-patched-solaris-sparc 2.11 456.20 NOTE
r-patched-solaris-x86 2.11 128.50 NOTE
r-release-linux-ix86 2.11 1.66 53.52 55.18 NOTE
r-release-linux-x86_64 2.11 1.22 50.01 51.22 NOTE
r-release-osx-x86_64-mavericks 2.11 NOTE
r-release-osx-x86_64-snowleopard 2.11 NOTE
r-release-windows-ix86+x86_64 2.11 4.00 74.00 78.00 NOTE
r-oldrel-windows-ix86+x86_64 2.11 4.00 60.00 64.00 NOTE

Check Details

Version: 2.11
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘nlme’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.11
Check: R code for possible problems
Result: NOTE
    cpg.GC: no visible global function definition for ‘qvalue’
    cpg.combine: no visible global function definition for ‘qvalue’
    cpg.everything.matrix : ranmixed: no visible global function definition
     for ‘lme’
    cpg.perm: no visible global function definition for ‘qvalue’
    cpg.work: no visible global function definition for ‘qvalue’
    plot.cpg: no visible global function definition for ‘qvalue’
    plot.cpg.perm: no visible global function definition for ‘qvalue’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 2.11
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘qvalue’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 2.11
Check: R code for possible problems
Result: NOTE
    cpg.GC: no visible global function definition for ‘qvalue’
    cpg.combine: no visible global function definition for ‘qvalue’
    cpg.perm: no visible global function definition for ‘qvalue’
    cpg.work: no visible global function definition for ‘qvalue’
    plot.cpg: no visible global function definition for ‘qvalue’
    plot.cpg.perm: no visible global function definition for ‘qvalue’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard