CRAN Package Check Results for Package DOBAD

Last updated on 2016-02-10 08:47:07.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 1.0.4 1.58 135.32 136.90 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.4 267.99 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.4 262.85 NOTE
r-devel-osx-x86_64-clang 1.0.4 280.00 NOTE
r-devel-windows-ix86+x86_64 1.0.4 7.00 38.00 45.00 NOTE --no-vignettes
r-patched-linux-x86_64 1.0.4 1.51 232.45 233.96 NOTE
r-patched-solaris-sparc 1.0.4 275.60 NOTE --no-vignettes
r-patched-solaris-x86 1.0.4 454.30 NOTE
r-release-linux-x86_64 1.0.4 1.48 230.46 231.93 NOTE
r-release-osx-x86_64-mavericks 1.0.4 NOTE
r-release-windows-ix86+x86_64 1.0.4 9.00 36.00 45.00 NOTE --no-vignettes
r-oldrel-windows-ix86+x86_64 1.0.4 10.00 56.00 66.00 OK --no-vignettes

Check Details

Version: 1.0.4
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks

Version: 1.0.4
Check: R code for possible problems
Result: NOTE
    BD.MCMC.SC.CTMC_PO_1: no visible global function definition for
     ‘rgamma’
    BD.MCMC.SC.CTMC_PO_many: no visible global function definition for
     ‘rgamma’
    BD.MCMC.SC.list: no visible global function definition for ‘rgamma’
    CTMC.simulate: no visible global function definition for ‘rexp’
    CTMC.simulate: no visible global function definition for ‘rmultinom’
    EM.BD.1.CTMC_PO_1: no visible global function definition for ‘qnorm’
    EM.BD.1.CTMC_PO_many: no visible global function definition for ‘qnorm’
    birth.death.simulant: no visible global function definition for ‘rexp’
    getBDsummaryProdExpecs: no visible binding for global variable ‘sd’
    getDataSummary.CTMC_PO_many: no visible global function definition for
     ‘sd’
    getNewParams.CTMC_PO_1: no visible global function definition for
     ‘qnorm’
    getNewParams.CTMC_PO_1: no visible global function definition for ‘var’
    getNewParams.CTMC_PO_many: no visible global function definition for
     ‘qnorm’
    getNewParams.CTMC_PO_many: no visible global function definition for
     ‘var’
    graph.CTMC: no visible binding for global variable ‘postscript’
    graph.CTMC: no visible global function definition for ‘dev.off’
    graph.CTMC: no visible binding for global variable ‘pdf’
    graph.CTMC.PO: no visible binding for global variable ‘postscript’
    graph.CTMC.PO: no visible global function definition for ‘dev.off’
    p.i: no visible global function definition for ‘integrate’
    power.coef.many: no visible global function definition for ‘fft’
    sampleJumpTime2: no visible global function definition for ‘runif’
    sampleJumpTime2: no visible global function definition for ‘integrate’
    sampleJumpTime2 : myF.i: no visible global function definition for
     ‘integrate’
    sim.condBD.1: no visible global function definition for ‘rbinom’
    sim.condBD.1: no visible global function definition for ‘runif’
    solveNuHat: no visible global function definition for ‘nlm’
    Undefined global functions or variables:
     dev.off fft integrate nlm pdf postscript qnorm rbinom rexp rgamma
     rmultinom runif sd var
    Consider adding
     importFrom("grDevices", "dev.off", "pdf", "postscript")
     importFrom("stats", "fft", "integrate", "nlm", "qnorm", "rbinom",
     "rexp", "rgamma", "rmultinom", "runif", "sd", "var")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang

Version: 1.0.4
Flags: --no-vignettes
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-windows-ix86+x86_64, r-patched-solaris-sparc, r-release-windows-ix86+x86_64

Version: 1.0.4
Flags: --no-vignettes
Check: R code for possible problems
Result: NOTE
    BD.MCMC.SC.CTMC_PO_1: no visible global function definition for
     'rgamma'
    BD.MCMC.SC.CTMC_PO_many: no visible global function definition for
     'rgamma'
    BD.MCMC.SC.list: no visible global function definition for 'rgamma'
    CTMC.simulate: no visible global function definition for 'rexp'
    CTMC.simulate: no visible global function definition for 'rmultinom'
    EM.BD.1.CTMC_PO_1: no visible global function definition for 'qnorm'
    EM.BD.1.CTMC_PO_many: no visible global function definition for 'qnorm'
    birth.death.simulant: no visible global function definition for 'rexp'
    getBDsummaryProdExpecs: no visible binding for global variable 'sd'
    getDataSummary.CTMC_PO_many: no visible global function definition for
     'sd'
    getNewParams.CTMC_PO_1: no visible global function definition for
     'qnorm'
    getNewParams.CTMC_PO_1: no visible global function definition for 'var'
    getNewParams.CTMC_PO_many: no visible global function definition for
     'qnorm'
    getNewParams.CTMC_PO_many: no visible global function definition for
     'var'
    graph.CTMC: no visible binding for global variable 'postscript'
    graph.CTMC: no visible global function definition for 'dev.off'
    graph.CTMC: no visible binding for global variable 'pdf'
    graph.CTMC.PO: no visible binding for global variable 'postscript'
    graph.CTMC.PO: no visible global function definition for 'dev.off'
    p.i: no visible global function definition for 'integrate'
    power.coef.many: no visible global function definition for 'fft'
    sampleJumpTime2: no visible global function definition for 'runif'
    sampleJumpTime2: no visible global function definition for 'integrate'
    sampleJumpTime2 : myF.i: no visible global function definition for
     'integrate'
    sim.condBD.1: no visible global function definition for 'rbinom'
    sim.condBD.1: no visible global function definition for 'runif'
    solveNuHat: no visible global function definition for 'nlm'
    Undefined global functions or variables:
     dev.off fft integrate nlm pdf postscript qnorm rbinom rexp rgamma
     rmultinom runif sd var
    Consider adding
     importFrom("grDevices", "dev.off", "pdf", "postscript")
     importFrom("stats", "fft", "integrate", "nlm", "qnorm", "rbinom",
     "rexp", "rgamma", "rmultinom", "runif", "sd", "var")
    to your NAMESPACE file.
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0.4
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: numDeriv
    make: Fatal error: Don't know how to make target `BD_EM.pdf'
    Current working directory /home/ripley/R/packages/tests32/DOBAD.Rcheck/vign_test/DOBAD/vignettes
    Error in buildVignettes(dir = "/home/ripley/R/packages/tests32/DOBAD.Rcheck/vign_test/DOBAD") :
     running 'make' failed
    Execution halted
Flavor: r-patched-solaris-x86