CRAN Package Check Results for Package DatABEL

Last updated on 2014-04-23 07:54:57.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9-4 8.10 17.23 25.34 OK
r-devel-linux-x86_64-debian-gcc 0.9-4 13.71 20.22 33.94 OK
r-devel-linux-x86_64-fedora-clang 0.9-4 63.84 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9-4 59.92 NOTE
r-devel-osx-x86_64-clang 0.9-4 60.79 OK
r-devel-osx-x86_64-gcc 0.9-4 NOTE
r-devel-windows-ix86+x86_64 0.9-4 49.00 44.00 93.00 OK
r-patched-linux-x86_64 0.9-4 13.97 21.59 35.56 OK
r-patched-solaris-sparc 0.9-4 327.70 OK
r-patched-solaris-x86 0.9-4 97.10 OK
r-release-linux-ix86 0.9-4 24.00 39.00 63.00 OK
r-release-linux-x86_64 0.9-4 13.76 18.28 32.04 OK
r-release-osx-x86_64-mavericks 0.9-4 WARN
r-release-windows-ix86+x86_64 0.9-4 44.00 43.00 87.00 OK
r-oldrel-windows-ix86+x86_64 0.9-4 46.00 48.00 94.00 OK

Check Details

Version: 0.9-4
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘CHANGES.LOG’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.9-4
Check: Rd line widths
Result: NOTE
    Rd file 'apply2dfo.Rd':
     \examples lines wider than 100 characters:
     tD <- apply2dfo(trait~SNP*sex,dfodata=b,anFUN="lm",transpose=FALSE,outclass="databel",outfile="tmpD")
    
    Rd file 'text2databel.Rd':
     \examples lines wider than 100 characters:
     colnames="test_matrix.colnames",rownames="test_matrix.rownames")
     colnames="test_matrix.colnames",rownames="test_matrix.rownames",transpose=TRUE)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.9-4
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘GenABEL’
Flavor: r-devel-osx-x86_64-gcc

Version: 0.9-4
Check: PDF version of manual
Result: WARNING
    LaTeX errors when creating PDF version.
    This typically indicates Rd problems.
    LaTeX errors found:
    ! LaTeX Error: File `upquote.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    e1b847/Rd2.tex:8: ==> Fatal error occurred, no output PDF file produced!
Flavor: r-release-osx-x86_64-mavericks