CRAN Package Check Results for Package Epi

Last updated on 2017-10-24 10:47:47.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.19 4.94 145.93 150.87 OK
r-devel-linux-x86_64-debian-gcc 2.19 4.78 149.65 154.43 OK
r-devel-linux-x86_64-fedora-clang 2.19 307.87 OK
r-devel-linux-x86_64-fedora-gcc 2.19 298.39 OK
r-devel-windows-ix86+x86_64 2.19 16.00 267.00 283.00 OK
r-patched-linux-x86_64 2.19 4.82 141.75 146.57 OK
r-patched-solaris-x86 2.19 376.60 OK
r-release-linux-x86_64 2.19 4.74 142.36 147.10 OK
r-release-windows-ix86+x86_64 2.19 27.00 269.00 296.00 OK
r-release-osx-x86_64 2.19 ERROR
r-oldrel-windows-ix86+x86_64 2.19 17.00 259.00 276.00 OK
r-oldrel-osx-x86_64 2.19 ERROR

Check Details

Version: 2.19
Check: running R code from vignettes
Result: ERROR
    Errors in running code in vignettes:
    when running code in ‘simLexis.rnw’
     ...
    
    > box(lwd = 3)
    
    > source("../R/simLexis.R", keep.source = TRUE)
    Warning in file(filename, "r", encoding = encoding) :
     cannot open file '../R/simLexis.R': No such file or directory
    
     When sourcing ‘simLexis.R’:
    Error: cannot open the connection
    Execution halted
    when running code in ‘yll.rnw’
     ...
    
    > plyll("Sus")
    
    > source("../R/erl.R", keep.source = TRUE)
    Warning in file(filename, "r", encoding = encoding) :
     cannot open file '../R/erl.R': No such file or directory
    
     When sourcing ‘yll.R’:
    Error: cannot open the connection
    Execution halted
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 2.19
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    The following object is masked from ‘package:base’:
    
     merge.data.frame
    
    Warning in Lexis(entry = list(Per = dodm, Age = dodm - dobth, DMdur = 0), :
     Dropping 4 rows with duration of follow up < tol
    
    Warning in coxph(Surv(DMdur, DMdur + lex.dur, lex.Xst %in% c("Dead(Ins)", :
     a variable appears on both the left and right sides of the formula
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'simLexis.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `nth.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    ! Emergency stop.
    <read *>
    
    l.34 \usepackage
     {makeidx,Sweave,floatflt,amsmath,amsfonts,amsbsy,enumitem,dc...
    ! ==> Fatal error occurred, no output PDF file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64