CRAN Package Check Results for Package ExomeDepth

Last updated on 2017-03-27 06:48:07.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.10 14.69 132.49 147.19 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.10 14.99 130.18 145.17 NOTE
r-devel-linux-x86_64-fedora-clang 1.1.10 313.57 NOTE --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 1.1.10 322.19 NOTE --no-stop-on-test-error
r-devel-macos-x86_64-clang 1.1.10 231.11 NOTE --no-stop-on-test-error
r-patched-linux-x86_64 1.1.10 16.07 128.82 144.89 NOTE
r-patched-solaris-sparc 1.1.10 2030.40 NOTE
r-patched-solaris-x86 1.1.10 425.50 NOTE
r-release-linux-x86_64 1.1.10 14.08 117.63 131.71 NOTE
r-release-osx-x86_64-mavericks 1.1.10 OK
r-release-windows-ix86+x86_64 1.1.10 69.00 319.00 388.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1.8 49.00 209.00 258.00 OK

Check Details

Version: 1.1.10
Check: R code for possible problems
Result: NOTE
    countBamInGRanges.exomeDepth: no visible global function definition for
     ‘as’
    Undefined global functions or variables:
     as
    Consider adding
     importFrom("methods", "as")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.1.10
Check: compiled code
Result: NOTE
    File ‘ExomeDepth/libs/ExomeDepth.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64

Version: 1.1.10
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    countBamInGRanges.exomeDepth: no visible global function definition for
     ‘as’
    Undefined global functions or variables:
     as
    Consider adding
     importFrom("methods", "as")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 1.1.10
Flags: --no-stop-on-test-error
Check: compiled code
Result: NOTE
    File ‘ExomeDepth/libs/ExomeDepth.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang