CRAN Package Check Results for Package ExomeDepth

Last updated on 2017-02-22 07:48:12.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.10 14.66 131.59 146.25 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.10 15.53 130.21 145.73 NOTE
r-devel-linux-x86_64-fedora-clang 1.1.10 309.15 NOTE --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 1.1.10 316.00 NOTE --no-stop-on-test-error
r-devel-macos-x86_64-clang 1.1.10 233.68 NOTE --no-stop-on-test-error
r-devel-windows-ix86+x86_64 1.1.10 67.00 334.00 401.00 NOTE
r-patched-linux-x86_64 1.1.10 14.79 117.53 132.31 NOTE
r-patched-solaris-sparc 1.1.10 1548.80 NOTE
r-patched-solaris-x86 1.1.10 357.60 NOTE
r-release-linux-x86_64 1.1.10 14.67 114.16 128.83 NOTE
r-release-osx-x86_64-mavericks 1.1.10 OK
r-release-windows-ix86+x86_64 1.1.10 97.00 266.00 363.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1.8 49.00 209.00 258.00 OK

Check Details

Version: 1.1.10
Check: R code for possible problems
Result: NOTE
    countBamInGRanges.exomeDepth: no visible global function definition for
     ‘as’
    Undefined global functions or variables:
     as
    Consider adding
     importFrom("methods", "as")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.1.10
Check: compiled code
Result: NOTE
    File ‘ExomeDepth/libs/ExomeDepth.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.1.10
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    countBamInGRanges.exomeDepth: no visible global function definition for
     ‘as’
    Undefined global functions or variables:
     as
    Consider adding
     importFrom("methods", "as")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang

Version: 1.1.10
Flags: --no-stop-on-test-error
Check: compiled code
Result: NOTE
    File ‘ExomeDepth/libs/ExomeDepth.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-x86_64-clang