CRAN Package Check Results for Package FAiR

Last updated on 2017-11-25 11:55:14 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4-15 7.65 225.64 233.28 ERROR
r-devel-linux-x86_64-debian-gcc 0.4-15 7.69 193.97 201.66 ERROR
r-devel-linux-x86_64-fedora-clang 0.4-15 205.55 ERROR
r-devel-linux-x86_64-fedora-gcc 0.4-15 204.98 ERROR
r-devel-windows-ix86+x86_64 0.4-15 27.00 6.00 33.00 ERROR
r-patched-linux-x86_64 0.4-15 8.04 240.97 249.01 ERROR
r-patched-solaris-x86 0.4-15 303.20 ERROR
r-release-linux-x86_64 0.4-15 8.97 241.51 250.49 ERROR
r-release-windows-ix86+x86_64 0.4-15 26.00 4.00 30.00 ERROR
r-release-osx-x86_64 0.4-15 ERROR
r-oldrel-windows-ix86+x86_64 0.4-15 28.00 5.00 33.00 ERROR
r-oldrel-osx-x86_64 0.4-15 ERROR

Check Details

Version: 0.4-15
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘Rgraphviz’ ‘corpcor’ ‘energy’ ‘mvnmle’ ‘mvnormtest’ ‘nFactors’
     ‘polycor’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.4-15
Check: foreign function calls
Result: NOTE
    Calls with DUP:
     .C(FAiR_QD_sum, sum = numeric(1), x = x, middle = middle, length = length(x),
     DUP = FALSE, NAOK = TRUE)
     .C(FAiR_QD_grad, grad = numeric(length_x), x = x, middle = middle,
     length = length_x, holder = numeric(length_x), DUP = FALSE,
     NAOK = TRUE)
     .C("exhaustive_mve", number = as.integer(0), combos = combos,
     lengthcombos = length(combos), Xdata = as.double(X), Xrow = nrow(X),
     Xcol = ncol(X), DUP = FALSE, PACKAGE = "FAiR")
    DUP is no longer supported and will be ignored.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.4-15
Check: R code for possible problems
Result: NOTE
    .onAttach: no visible global function definition for
     ‘packageDescription’
    .onAttach: no visible global function definition for ‘flush.console’
    FA2draws: no visible global function definition for ‘runif’
    FAiR_ADF: no visible global function definition for ‘Matrix’
    FAiR_ADF_robust: no visible global function definition for ‘CovMcd’
    FAiR_ADF_unbiased: no visible global function definition for ‘CovMcd’
    FAiR_ADF_unbiased: no visible global function definition for ‘cov.wt’
    FAiR_ADF_unbiased: no visible global function definition for ‘huberM’
    FAiR_DAG: no visible global function definition for ‘nodes’
    FAiR_DAG: no visible global function definition for ‘addEdge’
    FAiR_DAG: no visible global function definition for ‘subGraph’
    FAiR_HK: no visible global function definition for ‘median’
    FAiR_Mcd: no visible global function definition for ‘CovMcd’
    FAiR_Mcd: no visible global function definition for ‘cov2cor’
    FAiR_PACE : temp.fun: no visible global function definition for
     ‘complete.cases’
    FAiR_PACE: no visible global function definition for ‘combn’
    FAiR_RMSEA : foo: no visible global function definition for ‘pchisq’
    FAiR_RMSEA: no visible global function definition for ‘uniroot’
    FAiR_RMSEA: no visible global function definition for ‘pchisq’
    FAiR_Steiger : foo: no visible global function definition for ‘pchisq’
    FAiR_Steiger: no visible global function definition for ‘uniroot’
    FAiR_blockanator: no visible global function definition for ‘gmessage’
    FAiR_bootstrap2dppMatrix: no visible global function definition for
     ‘Matrix’
    FAiR_bounds_coef: no visible global function definition for ‘gmessage’
    FAiR_bounds_cormat: no visible global function definition for
     ‘gmessage’
    FAiR_constraints_1st : FAiR_criterion_evRF_1st: no visible global
     function definition for ‘cov2cor’
    FAiR_constraints_1st : FAiR_criterion_dist_cols_1st: no visible global
     function definition for ‘dist’
    FAiR_constraints_2nd : FAiR_criterion_dist_cols_2nd: no visible global
     function definition for ‘dist’
    FAiR_constraints_2nd : FAiR_criterion_evRF_2nd: no visible global
     function definition for ‘cov2cor’
    FAiR_cor.rank: no visible global function definition for ‘cor’
    FAiR_cor.rank: no visible global function definition for ‘Diagonal’
    FAiR_cov.shrink: no visible global function definition for ‘cov.shrink’
    FAiR_cov.shrink: no visible global function definition for ‘Diagonal’
    FAiR_cov.shrink: no visible binding for global variable ‘weighted.mean’
    FAiR_cov.shrink: no visible global function definition for ‘cov2cor’
    FAiR_deriv_matrix: no visible global function definition for
     ‘numericDeriv’
    FAiR_draws2CI: no visible binding for global variable ‘quantile’
    FAiR_edit: no visible global function definition for ‘ggroup’
    FAiR_edit: no visible global function definition for ‘glabel’
    FAiR_edit: no visible global function definition for ‘flush.console’
    FAiR_edit: no visible global function definition for ‘gdf’
    FAiR_edit: no visible global function definition for ‘gbasicdialog’
    FAiR_edit: no visible global function definition for ‘guiToolkit’
    FAiR_equality_restrictions: no visible global function definition for
     ‘gmessage’
    FAiR_get_answer: no visible global function definition for ‘ggroup’
    FAiR_get_answer: no visible global function definition for ‘glabel’
    FAiR_get_answer: no visible global function definition for ‘gseparator’
    FAiR_get_answer: no visible global function definition for ‘gradio’
    FAiR_get_answer: no visible global function definition for ‘gslider’
    FAiR_get_answer: no visible global function definition for
     ‘gcheckboxgroup’
    FAiR_get_answer: no visible global function definition for
     ‘flush.console’
    FAiR_get_answer: no visible global function definition for
     ‘gbasicdialog’
    FAiR_get_answer: no visible global function definition for ‘guiToolkit’
    FAiR_get_mapping_rule_args: no visible global function definition for
     ‘gmessage’
    FAiR_hetcor: no visible global function definition for ‘hetcor’
    FAiR_hetcor: no visible global function definition for ‘cor’
    FAiR_hetcor: no visible global function definition for ‘Diagonal’
    FAiR_indicators_FC: no visible global function definition for
     ‘gmessage’
    FAiR_make_manifest.data_numeric: no visible global function definition
     for ‘cov.wt’
    FAiR_make_manifest.data_numeric: no visible binding for global variable
     ‘weighted.mean’
    FAiR_make_manifest.data_numeric: no visible global function definition
     for ‘cov2cor’
    FAiR_make_manifest_list: no visible global function definition for
     ‘Diagonal’
    FAiR_make_manifest_list: no visible global function definition for
     ‘cov2cor’
    FAiR_make_starts_for_Rotate: no visible global function definition for
     ‘combn’
    FAiR_make_target: no visible global function definition for ‘gmessage’
    FAiR_mlest: no visible global function definition for ‘mlest’
    FAiR_mlest: no visible global function definition for ‘cov2cor’
    FAiR_nearPD: no visible global function definition for ‘cov2cor’
    FAiR_numeric_gradient: no visible global function definition for
     ‘numericDeriv’
    FAiR_order_FC: no visible global function definition for ‘gmessage’
    FAiR_paired: no visible global function definition for ‘pchisq’
    FAiR_parallel_4th: no visible global function definition for ‘rnorm’
    FAiR_parallel_4th: no visible global function definition for ‘cov.wt’
    FAiR_parallel_4th: no visible global function definition for ‘cov2cor’
    FAiR_parallel_4th : SEcentile: no visible global function definition
     for ‘dnorm’
    FAiR_parallel_4th : SEcentile: no visible global function definition
     for ‘qnorm’
    FAiR_parallel_4th: no visible binding for global variable ‘sd’
    FAiR_parallel_4th : quant: no visible global function definition for
     ‘quantile’
    FAiR_parse_formula: no visible global function definition for ‘terms’
    FAiR_peg_coefficients: no visible global function definition for
     ‘gmessage’
    FAiR_profile: no visible global function definition for ‘par’
    FAiR_profile: no visible global function definition for ‘abline’
    FAiR_quick_Rotate: no visible global function definition for ‘targetT’
    FAiR_quick_Rotate: no visible global function definition for ‘GPForth’
    FAiR_quick_Rotate: no visible global function definition for ‘targetQ’
    FAiR_quick_Rotate: no visible global function definition for ‘GPFoblq’
    FAiR_quick_Rotate: no visible global function definition for ‘optim’
    FAiR_show_manifest: no visible global function definition for ‘pchisq’
    FAiR_show_manifest: no visible global function definition for ‘cov2cor’
    FAiR_shrink: no visible global function definition for ‘cov2cor’
    FAiR_stress_test: no visible global function definition for ‘dev.off’
    FAiR_stress_test: no visible global function definition for ‘BIC’
    FAiR_test_Browne84: no visible global function definition for ‘pchisq’
    FAiR_test_SB94: no visible global function definition for ‘pchisq’
    FAiR_test_T2: no visible global function definition for ‘pf’
    FAiR_test_YB98: no visible global function definition for ‘pchisq’
    FAiR_test_exact_fit: no visible global function definition for ‘pchisq’
    FAiR_uniquify: no visible global function definition for ‘runif’
    Factanal: no visible global function definition for ‘factanal’
    Factanal: no visible global function definition for ‘flush.console’
    Factanal: no visible global function definition for ‘optim’
    Rotate: no visible global function definition for ‘optim’
    write.CEFA: no visible global function definition for ‘write.table’
    write.cefa: no visible global function definition for ‘write.table’
    create_FAobject,restrictions.independent-manifest.basic: no visible
     binding for global variable ‘factors’
    create_start,restrictions-manifest.basic : <anonymous>: no visible
     global function definition for ‘runif’
    create_start,restrictions.1storder-manifest.basic : <anonymous>: no
     visible global function definition for ‘runif’
    create_start,restrictions.1storder-manifest.basic: no visible global
     function definition for ‘GPForth’
    create_start,restrictions.1storder-manifest.basic: no visible global
     function definition for ‘runif’
    create_start,restrictions.1storder-manifest.basic: no visible global
     function definition for ‘rnorm’
    create_start,restrictions.2ndorder-manifest.basic : <anonymous>: no
     visible global function definition for ‘runif’
    create_start,restrictions.2ndorder-manifest.basic: no visible global
     function definition for ‘GPForth’
    create_start,restrictions.2ndorder-manifest.basic: no visible global
     function definition for ‘runif’
    create_start,restrictions.2ndorder-manifest.basic: no visible global
     function definition for ‘rnorm’
    create_start,restrictions.factanal-manifest.basic : <anonymous>: no
     visible global function definition for ‘runif’
    create_start,restrictions.general-manifest.basic : <anonymous>: no
     visible global function definition for ‘runif’
    create_start,restrictions.general-manifest.basic: no visible global
     function definition for ‘GPForth’
    create_start,restrictions.general-manifest.basic: no visible global
     function definition for ‘runif’
    create_start,restrictions.general-manifest.basic: no visible global
     function definition for ‘rnorm’
    create_start,restrictions.orthonormal-manifest.basic : beta_fun: no
     visible global function definition for ‘runif’
    create_start,restrictions.orthonormal-manifest.basic: no visible global
     function definition for ‘rnorm’
    make_manifest,formula-data.frame-missing: no visible global function
     definition for ‘get_all_vars’
    make_manifest,formula-data.frame-missing: no visible binding for global
     variable ‘Z’
    make_manifest,missing-missing-CovMcd: no visible global function
     definition for ‘cov2cor’
    make_restrictions,manifest.basic-parameter.scale-missing-missing-missing-missing:
     no visible binding for global variable ‘manfiest’
    make_restrictions,manifest.basic-parameter.scale-missing-missing-missing-missing:
     no visible binding for global variable ‘criteria’
    pairs,FA: no visible global function definition for ‘par’
    pairs,FA : <anonymous>: no visible global function definition for
     ‘palette’
    pairs,FA : UP: no visible global function definition for ‘abline’
    pairs,FA : UP: no visible global function definition for ‘points’
    pairs,FA : LP: no visible global function definition for ‘abline’
    pairs,FA : LP: no visible global function definition for ‘segments’
    pairs,FA : TP: no visible global function definition for ‘text’
    pairs,FA: no visible global function definition for ‘pairs.default’
    plot,FA-missing: no visible global function definition for ‘addEdge’
    plot,FA-missing: no visible binding for global variable ‘toDot’
    plot,FA.2ndorder-missing: no visible global function definition for
     ‘addEdge’
    plot,FA.2ndorder-missing: no visible global function definition for
     ‘join’
    plot,FA.2ndorder-missing: no visible binding for global variable
     ‘toDot’
    plot,FA.general-missing: no visible global function definition for
     ‘join’
    plot,FA.general-missing: no visible binding for global variable ‘toDot’
    plot,manifest.basic-missing: no visible global function definition for
     ‘heatmap’
    plot,manifest.data.mcd-missing: no visible global function definition
     for ‘heatmap’
    plot,summary.FA-ANY: no visible global function definition for
     ‘heatmap’
    profile,FA.2ndorder: no visible global function definition for ‘par’
    profile,FA.2ndorder: no visible global function definition for ‘abline’
    profile,FA.general: no visible global function definition for ‘par’
    profile,FA.general: no visible binding for global variable ‘p’
    profile,FA.general: no visible global function definition for ‘abline’
    restrictions2draws,restrictions.1storder-manifest.basic: no visible
     global function definition for ‘rnorm’
    restrictions2draws,restrictions.1storder.EFA-manifest.basic: no visible
     global function definition for ‘rnorm’
    restrictions2draws,restrictions.2ndorder-manifest.basic: no visible
     global function definition for ‘rnorm’
    restrictions2draws,restrictions.general-manifest.basic: no visible
     global function definition for ‘rnorm’
    restrictions2draws,restrictions.orthonormal-manifest.basic: no visible
     global function definition for ‘rnorm’
    screeplot,FA: no visible global function definition for ‘parallel’
    screeplot,FA: no visible global function definition for ‘nScree’
    screeplot,FA: no visible global function definition for ‘plotnScree’
    screeplot,manifest.basic: no visible global function definition for
     ‘parallel’
    screeplot,manifest.basic: no visible global function definition for
     ‘nScree’
    screeplot,manifest.basic: no visible global function definition for
     ‘plotnScree’
    screeplot,manifest.data: no visible global function definition for
     ‘parallel’
    screeplot,manifest.data: no visible global function definition for
     ‘nScree’
    screeplot,manifest.data: no visible global function definition for
     ‘plotnScree’
    screeplot,manifest.data: no visible global function definition for
     ‘cov2cor’
    show,manifest.data: no visible global function definition for
     ‘mshapiro.test’
    show,manifest.data: no visible global function definition for
     ‘mvnorm.etest’
    show,restrictions: no visible global function definition for ‘str’
    show,summary.FA: no visible binding for global variable ‘sd’
    simulate,FA: no visible global function definition for ‘runif’
    uniquenesses,restrictions: no visible binding for global variable
     ‘restrictions’
    Undefined global functions or variables:
     BIC CovMcd Diagonal GPFoblq GPForth Matrix Z abline addEdge combn
     complete.cases cor cov.shrink cov.wt cov2cor criteria dev.off dist
     dnorm factanal factors flush.console gbasicdialog gcheckboxgroup gdf
     get_all_vars ggroup glabel gmessage gradio gseparator gslider
     guiToolkit heatmap hetcor huberM join manfiest median mlest
     mshapiro.test mvnorm.etest nScree nodes numericDeriv optim p
     packageDescription pairs.default palette par parallel pchisq pf
     plotnScree points qnorm quantile restrictions rnorm runif sd segments
     str subGraph targetQ targetT terms text toDot uniroot weighted.mean
     write.table
    Consider adding
     importFrom("grDevices", "dev.off", "palette")
     importFrom("graphics", "abline", "pairs.default", "par", "points",
     "segments", "text")
     importFrom("stats", "BIC", "complete.cases", "cor", "cov.wt",
     "cov2cor", "dist", "dnorm", "factanal", "get_all_vars",
     "heatmap", "median", "numericDeriv", "optim", "pchisq",
     "pf", "qnorm", "quantile", "rnorm", "runif", "sd", "terms",
     "uniroot", "weighted.mean")
     importFrom("utils", "combn", "flush.console", "packageDescription",
     "str", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.4-15
Check: compiled code
Result: NOTE
    File ‘FAiR/libs/FAiR.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.4-15
Check: tests
Result: ERROR
     Running ‘testsCFA.R’ [0s/1s]
     Running ‘testsEFA.R’ [0s/1s]
     Running ‘testsMANIFEST.R’ [8s/11s]
     Running ‘testsMICRO.R’ [3s/5s]
    Running the tests in ‘tests/testsMICRO.R’ failed.
    Complete output:
     > notests <- FALSE
     > if(notests) q(save = "no")
     > stopifnot(require(FAiR))
     Loading required package: FAiR
     Loading required package: rgenoud
     ## rgenoud (Version 5.8-1.0, Build Date: 2017-10-10)
     ## See http://sekhon.berkeley.edu/rgenoud for additional documentation.
     ## Please cite software as:
     ## Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011.
     ## ``Genetic Optimization Using Derivatives: The rgenoud package for R.''
     ## Journal of Statistical Software, 42(11): 1-26.
     ##
    
     Loading required package: gWidgetsRGtk2
     Loading required package: RGtk2
     Loading required package: gWidgets
     Loading required package: cairoDevice
     Loading required package: stats4
     Loading required package: rrcov
     Loading required package: robustbase
     Scalable Robust Estimators with High Breakdown Point (version 1.4-3)
    
     Loading required package: Matrix
     ## FAiR Version 0.4-15 Build Date: 2014-02-08
     ## See http://wiki.r-project.org/rwiki/doku.php?id=packages:cran:fair for more info
     FAiR Copyright (C) 2008 -- 2012 Benjamin King Goodrich
     This program comes with ABSOLUTELY NO WARRANTY.
     This is free software, and you are welcome to redistribute it
     under certain conditions, namely those specified in the LICENSE file
     in the root directory of the source code.
     >
     > ## FAiR_PACE_by_RGENOUD
     > Sigma <- diag(5)
     > Sigma[1,] <- Sigma[,1] <- c(1,.49, .14, .48, .22)
     > Sigma[2,] <- Sigma[,2] <- c(.49, 1, .07, .42, .14)
     > Sigma[3,] <- Sigma[,3] <- c(.14, .07, 1, .48, .58)
     > Sigma[4,] <- Sigma[,4] <- c(.48, .42, .48, 1, .60)
     > Sigma[5,] <- Sigma[,5] <- c(.22, .14, .58, .60, 1)
     >
     > rownames(Sigma) <- colnames(Sigma) <- paste("Y", 1:5, sep = ".")
     > test_PASS <- FAiR:::FAiR_PACE_by_RGENOUD(Sigma, 2)
     Error in genoud(fn = opt.fun, nvars = 2 * factors, max = TRUE, Domains = cbind(rep(1, :
     (list) object cannot be coerced to type 'double'
     Calls: <Anonymous> -> genoud
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.4-15
Check: tests
Result: ERROR
     Running ‘testsCFA.R’ [0s/1s]
     Running ‘testsEFA.R’ [0s/1s]
     Running ‘testsMANIFEST.R’ [6s/8s]
     Running ‘testsMICRO.R’ [3s/5s]
    Running the tests in ‘tests/testsMICRO.R’ failed.
    Complete output:
     > notests <- FALSE
     > if(notests) q(save = "no")
     > stopifnot(require(FAiR))
     Loading required package: FAiR
     Loading required package: rgenoud
     ## rgenoud (Version 5.8-1.0, Build Date: 2017-10-10)
     ## See http://sekhon.berkeley.edu/rgenoud for additional documentation.
     ## Please cite software as:
     ## Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011.
     ## ``Genetic Optimization Using Derivatives: The rgenoud package for R.''
     ## Journal of Statistical Software, 42(11): 1-26.
     ##
    
     Loading required package: gWidgetsRGtk2
     Loading required package: RGtk2
     Loading required package: gWidgets
     Loading required package: cairoDevice
     Loading required package: stats4
     Loading required package: rrcov
     Loading required package: robustbase
     Scalable Robust Estimators with High Breakdown Point (version 1.4-3)
    
     Loading required package: Matrix
     ## FAiR Version 0.4-15 Build Date: 2014-02-08
     ## See http://wiki.r-project.org/rwiki/doku.php?id=packages:cran:fair for more info
     FAiR Copyright (C) 2008 -- 2012 Benjamin King Goodrich
     This program comes with ABSOLUTELY NO WARRANTY.
     This is free software, and you are welcome to redistribute it
     under certain conditions, namely those specified in the LICENSE file
     in the root directory of the source code.
     >
     > ## FAiR_PACE_by_RGENOUD
     > Sigma <- diag(5)
     > Sigma[1,] <- Sigma[,1] <- c(1,.49, .14, .48, .22)
     > Sigma[2,] <- Sigma[,2] <- c(.49, 1, .07, .42, .14)
     > Sigma[3,] <- Sigma[,3] <- c(.14, .07, 1, .48, .58)
     > Sigma[4,] <- Sigma[,4] <- c(.48, .42, .48, 1, .60)
     > Sigma[5,] <- Sigma[,5] <- c(.22, .14, .58, .60, 1)
     >
     > rownames(Sigma) <- colnames(Sigma) <- paste("Y", 1:5, sep = ".")
     > test_PASS <- FAiR:::FAiR_PACE_by_RGENOUD(Sigma, 2)
     Error in genoud(fn = opt.fun, nvars = 2 * factors, max = TRUE, Domains = cbind(rep(1, :
     (list) object cannot be coerced to type 'double'
     Calls: <Anonymous> -> genoud
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.4-15
Check: tests
Result: ERROR
     Running ‘testsCFA.R’
     Running ‘testsEFA.R’
     Running ‘testsMANIFEST.R’ [9s/11s]
     Running ‘testsMICRO.R’
     Running ‘testsRESTRICTIONS.R’ [8s/10s]
     Running ‘testsSEFA.R’
    Running the tests in ‘tests/testsMICRO.R’ failed.
    Complete output:
     > notests <- FALSE
     > if(notests) q(save = "no")
     > stopifnot(require(FAiR))
     Loading required package: FAiR
     Loading required package: rgenoud
     ## rgenoud (Version 5.8-1.0, Build Date: 2017-10-10)
     ## See http://sekhon.berkeley.edu/rgenoud for additional documentation.
     ## Please cite software as:
     ## Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011.
     ## ``Genetic Optimization Using Derivatives: The rgenoud package for R.''
     ## Journal of Statistical Software, 42(11): 1-26.
     ##
    
     Loading required package: gWidgetsRGtk2
     Loading required package: RGtk2
     Loading required package: gWidgets
     Loading required package: cairoDevice
     Loading required package: stats4
     Loading required package: rrcov
     Loading required package: robustbase
     Scalable Robust Estimators with High Breakdown Point (version 1.4-3)
    
     Loading required package: Matrix
     ## FAiR Version 0.4-15 Build Date: 2014-02-08
     ## See http://wiki.r-project.org/rwiki/doku.php?id=packages:cran:fair for more info
     FAiR Copyright (C) 2008 -- 2012 Benjamin King Goodrich
     This program comes with ABSOLUTELY NO WARRANTY.
     This is free software, and you are welcome to redistribute it
     under certain conditions, namely those specified in the LICENSE file
     in the root directory of the source code.
     >
     > ## FAiR_PACE_by_RGENOUD
     > Sigma <- diag(5)
     > Sigma[1,] <- Sigma[,1] <- c(1,.49, .14, .48, .22)
     > Sigma[2,] <- Sigma[,2] <- c(.49, 1, .07, .42, .14)
     > Sigma[3,] <- Sigma[,3] <- c(.14, .07, 1, .48, .58)
     > Sigma[4,] <- Sigma[,4] <- c(.48, .42, .48, 1, .60)
     > Sigma[5,] <- Sigma[,5] <- c(.22, .14, .58, .60, 1)
     >
     > rownames(Sigma) <- colnames(Sigma) <- paste("Y", 1:5, sep = ".")
     > test_PASS <- FAiR:::FAiR_PACE_by_RGENOUD(Sigma, 2)
     Error in genoud(fn = opt.fun, nvars = 2 * factors, max = TRUE, Domains = cbind(rep(1, :
     (list) object cannot be coerced to type 'double'
     Calls: <Anonymous> -> genoud
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.4-15
Check: tests
Result: ERROR
     Running ‘testsCFA.R’
     Running ‘testsEFA.R’
     Running ‘testsMANIFEST.R’ [9s/13s]
     Running ‘testsMICRO.R’
     Running ‘testsRESTRICTIONS.R’ [8s/12s]
     Running ‘testsSEFA.R’
    Running the tests in ‘tests/testsMICRO.R’ failed.
    Complete output:
     > notests <- FALSE
     > if(notests) q(save = "no")
     > stopifnot(require(FAiR))
     Loading required package: FAiR
     Loading required package: rgenoud
     ## rgenoud (Version 5.8-1.0, Build Date: 2017-10-10)
     ## See http://sekhon.berkeley.edu/rgenoud for additional documentation.
     ## Please cite software as:
     ## Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011.
     ## ``Genetic Optimization Using Derivatives: The rgenoud package for R.''
     ## Journal of Statistical Software, 42(11): 1-26.
     ##
    
     Loading required package: gWidgetsRGtk2
     Loading required package: RGtk2
     Loading required package: gWidgets
     Loading required package: cairoDevice
     Loading required package: stats4
     Loading required package: rrcov
     Loading required package: robustbase
     Scalable Robust Estimators with High Breakdown Point (version 1.4-3)
    
     Loading required package: Matrix
     ## FAiR Version 0.4-15 Build Date: 2014-02-08
     ## See http://wiki.r-project.org/rwiki/doku.php?id=packages:cran:fair for more info
     FAiR Copyright (C) 2008 -- 2012 Benjamin King Goodrich
     This program comes with ABSOLUTELY NO WARRANTY.
     This is free software, and you are welcome to redistribute it
     under certain conditions, namely those specified in the LICENSE file
     in the root directory of the source code.
     >
     > ## FAiR_PACE_by_RGENOUD
     > Sigma <- diag(5)
     > Sigma[1,] <- Sigma[,1] <- c(1,.49, .14, .48, .22)
     > Sigma[2,] <- Sigma[,2] <- c(.49, 1, .07, .42, .14)
     > Sigma[3,] <- Sigma[,3] <- c(.14, .07, 1, .48, .58)
     > Sigma[4,] <- Sigma[,4] <- c(.48, .42, .48, 1, .60)
     > Sigma[5,] <- Sigma[,5] <- c(.22, .14, .58, .60, 1)
     >
     > rownames(Sigma) <- colnames(Sigma) <- paste("Y", 1:5, sep = ".")
     > test_PASS <- FAiR:::FAiR_PACE_by_RGENOUD(Sigma, 2)
     Error in genoud(fn = opt.fun, nvars = 2 * factors, max = TRUE, Domains = cbind(rep(1, :
     (list) object cannot be coerced to type 'double'
     Calls: <Anonymous> -> genoud
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.4-15
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.4-15
Check: tests
Result: ERROR
     Running ‘testsCFA.R’ [0s/1s]
     Running ‘testsEFA.R’ [0s/1s]
     Running ‘testsMANIFEST.R’ [8s/12s]
     Running ‘testsMICRO.R’ [4s/5s]
    Running the tests in ‘tests/testsMICRO.R’ failed.
    Complete output:
     > notests <- FALSE
     > if(notests) q(save = "no")
     > stopifnot(require(FAiR))
     Loading required package: FAiR
     Loading required package: rgenoud
     ## rgenoud (Version 5.8-1.0, Build Date: 2017-10-10)
     ## See http://sekhon.berkeley.edu/rgenoud for additional documentation.
     ## Please cite software as:
     ## Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011.
     ## ``Genetic Optimization Using Derivatives: The rgenoud package for R.''
     ## Journal of Statistical Software, 42(11): 1-26.
     ##
    
     Loading required package: gWidgetsRGtk2
     Loading required package: RGtk2
     Loading required package: gWidgets
     Loading required package: cairoDevice
     Loading required package: stats4
     Loading required package: rrcov
     Loading required package: robustbase
     Scalable Robust Estimators with High Breakdown Point (version 1.4-3)
    
     Loading required package: Matrix
     ## FAiR Version 0.4-15 Build Date: 2014-02-08
     ## See http://wiki.r-project.org/rwiki/doku.php?id=packages:cran:fair for more info
     FAiR Copyright (C) 2008 -- 2012 Benjamin King Goodrich
     This program comes with ABSOLUTELY NO WARRANTY.
     This is free software, and you are welcome to redistribute it
     under certain conditions, namely those specified in the LICENSE file
     in the root directory of the source code.
     >
     > ## FAiR_PACE_by_RGENOUD
     > Sigma <- diag(5)
     > Sigma[1,] <- Sigma[,1] <- c(1,.49, .14, .48, .22)
     > Sigma[2,] <- Sigma[,2] <- c(.49, 1, .07, .42, .14)
     > Sigma[3,] <- Sigma[,3] <- c(.14, .07, 1, .48, .58)
     > Sigma[4,] <- Sigma[,4] <- c(.48, .42, .48, 1, .60)
     > Sigma[5,] <- Sigma[,5] <- c(.22, .14, .58, .60, 1)
     >
     > rownames(Sigma) <- colnames(Sigma) <- paste("Y", 1:5, sep = ".")
     > test_PASS <- FAiR:::FAiR_PACE_by_RGENOUD(Sigma, 2)
     Error in genoud(fn = opt.fun, nvars = 2 * factors, max = TRUE, Domains = cbind(rep(1, :
     (list) object cannot be coerced to type 'double'
     Calls: <Anonymous> -> genoud
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 0.4-15
Check: tests
Result: ERROR
     Running ‘testsCFA.R’
     Running ‘testsEFA.R’
     Running ‘testsMANIFEST.R’ [13s/15s]
     Running ‘testsMICRO.R’ [8s/12s]
     Running ‘testsRESTRICTIONS.R’ [11s/14s]
     Running ‘testsSEFA.R’
    Running the tests in ‘tests/testsMICRO.R’ failed.
    Complete output:
     > notests <- FALSE
     > if(notests) q(save = "no")
     > stopifnot(require(FAiR))
     Loading required package: FAiR
     Loading required package: rgenoud
     ## rgenoud (Version 5.8-1.0, Build Date: 2017-10-10)
     ## See http://sekhon.berkeley.edu/rgenoud for additional documentation.
     ## Please cite software as:
     ## Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011.
     ## ``Genetic Optimization Using Derivatives: The rgenoud package for R.''
     ## Journal of Statistical Software, 42(11): 1-26.
     ##
    
     Loading required package: gWidgetsRGtk2
     Loading required package: RGtk2
     Loading required package: gWidgets
     Loading required package: cairoDevice
     Loading required package: stats4
     Loading required package: rrcov
     Loading required package: robustbase
     Scalable Robust Estimators with High Breakdown Point (version 1.4-3)
    
     Loading required package: Matrix
     ## FAiR Version 0.4-15 Build Date: 2014-02-08
     ## See http://wiki.r-project.org/rwiki/doku.php?id=packages:cran:fair for more info
     FAiR Copyright (C) 2008 -- 2012 Benjamin King Goodrich
     This program comes with ABSOLUTELY NO WARRANTY.
     This is free software, and you are welcome to redistribute it
     under certain conditions, namely those specified in the LICENSE file
     in the root directory of the source code.
     >
     > ## FAiR_PACE_by_RGENOUD
     > Sigma <- diag(5)
     > Sigma[1,] <- Sigma[,1] <- c(1,.49, .14, .48, .22)
     > Sigma[2,] <- Sigma[,2] <- c(.49, 1, .07, .42, .14)
     > Sigma[3,] <- Sigma[,3] <- c(.14, .07, 1, .48, .58)
     > Sigma[4,] <- Sigma[,4] <- c(.48, .42, .48, 1, .60)
     > Sigma[5,] <- Sigma[,5] <- c(.22, .14, .58, .60, 1)
     >
     > rownames(Sigma) <- colnames(Sigma) <- paste("Y", 1:5, sep = ".")
     > test_PASS <- FAiR:::FAiR_PACE_by_RGENOUD(Sigma, 2)
     Error in genoud(fn = opt.fun, nvars = 2 * factors, max = TRUE, Domains = cbind(rep(1, :
     (list) object cannot be coerced to type 'double'
     Calls: <Anonymous> -> genoud
     Execution halted
Flavor: r-patched-solaris-x86

Version: 0.4-15
Check: tests
Result: ERROR
     Running ‘testsCFA.R’ [0s/1s]
     Running ‘testsEFA.R’ [0s/1s]
     Running ‘testsMANIFEST.R’ [9s/12s]
     Running ‘testsMICRO.R’ [4s/6s]
    Running the tests in ‘tests/testsMICRO.R’ failed.
    Complete output:
     > notests <- FALSE
     > if(notests) q(save = "no")
     > stopifnot(require(FAiR))
     Loading required package: FAiR
     Loading required package: rgenoud
     ## rgenoud (Version 5.8-1.0, Build Date: 2017-10-10)
     ## See http://sekhon.berkeley.edu/rgenoud for additional documentation.
     ## Please cite software as:
     ## Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011.
     ## ``Genetic Optimization Using Derivatives: The rgenoud package for R.''
     ## Journal of Statistical Software, 42(11): 1-26.
     ##
    
     Loading required package: gWidgetsRGtk2
     Loading required package: RGtk2
     Loading required package: gWidgets
     Loading required package: cairoDevice
     Loading required package: stats4
     Loading required package: rrcov
     Loading required package: robustbase
     Scalable Robust Estimators with High Breakdown Point (version 1.4-3)
    
     Loading required package: Matrix
     ## FAiR Version 0.4-15 Build Date: 2014-02-08
     ## See http://wiki.r-project.org/rwiki/doku.php?id=packages:cran:fair for more info
     FAiR Copyright (C) 2008 -- 2012 Benjamin King Goodrich
     This program comes with ABSOLUTELY NO WARRANTY.
     This is free software, and you are welcome to redistribute it
     under certain conditions, namely those specified in the LICENSE file
     in the root directory of the source code.
     >
     > ## FAiR_PACE_by_RGENOUD
     > Sigma <- diag(5)
     > Sigma[1,] <- Sigma[,1] <- c(1,.49, .14, .48, .22)
     > Sigma[2,] <- Sigma[,2] <- c(.49, 1, .07, .42, .14)
     > Sigma[3,] <- Sigma[,3] <- c(.14, .07, 1, .48, .58)
     > Sigma[4,] <- Sigma[,4] <- c(.48, .42, .48, 1, .60)
     > Sigma[5,] <- Sigma[,5] <- c(.22, .14, .58, .60, 1)
     >
     > rownames(Sigma) <- colnames(Sigma) <- paste("Y", 1:5, sep = ".")
     > test_PASS <- FAiR:::FAiR_PACE_by_RGENOUD(Sigma, 2)
     Error in genoud(fn = opt.fun, nvars = 2 * factors, max = TRUE, Domains = cbind(rep(1, :
     (list) object cannot be coerced to type 'double'
     Calls: <Anonymous> -> genoud
     Execution halted
Flavor: r-release-linux-x86_64

Version: 0.4-15
Check: package dependencies
Result: ERROR
    Package required but not available: ‘gWidgetsRGtk2’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64