CRAN Package Check Results for Package GAMBoost

Last updated on 2014-11-28 01:48:05.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2-3 3.52 43.20 46.72 NOTE
r-devel-linux-x86_64-debian-gcc 1.2-3 3.41 41.90 45.31 NOTE
r-devel-linux-x86_64-fedora-clang 1.2-3 111.87 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2-3 105.67 NOTE
r-devel-osx-x86_64-clang 1.2-3 85.21 NOTE
r-devel-windows-ix86+x86_64 1.2-3 10.00 84.00 94.00 NOTE
r-patched-linux-x86_64 1.2-3 3.76 42.77 46.53 NOTE
r-patched-solaris-sparc 1.2-3 599.00 NOTE
r-patched-solaris-x86 1.2-3 137.10 NOTE
r-release-linux-ix86 1.2-3 4.28 49.85 54.12 NOTE
r-release-linux-x86_64 1.2-3 3.72 43.63 47.35 NOTE
r-release-osx-x86_64-mavericks 1.2-3 NOTE
r-release-windows-ix86+x86_64 1.2-3 10.00 84.00 94.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2-3 10.00 85.00 95.00 NOTE

Check Details

Version: 1.2-3
Check: top-level files
Result: NOTE
    Non-standard files/directories found at top level:
     ‘changeLog’ ‘gnugpl2.txt’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.2-3
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘Matrix’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.2-3
Check: foreign function calls
Result: NOTE
    Calls with DUP:
     .C("get_min_score_dev_binary_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     double(componentwise.no), index = integer(1), score = double(componentwise.no),
     dev = double(1), DUP = FALSE)
     .C("calc_dev_binary_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     double(componentwise.no), double(componentwise.no), res = double(componentwise.no),
     DUP = FALSE)
     .C("pre_sum_index", x.linear, as.integer(length(D)), as.integer(componentwise.no),
     as.integer(nrow(x.linear)), subset.index, linpen.index, as.double(D),
     as.double(weights), res = double(componentwise.no), DUP = FALSE)
     .C("get_min_score_dev_gaussian_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     pre.sum, index = integer(1), score = double(componentwise.no),
     dev = double(1), DUP = FALSE)
     .C("get_min_score_dev_general_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     double(componentwise.no), index = integer(1), score = double(componentwise.no),
     beta.delta = double(1), DUP = FALSE)
    DUP is no longer supported and will be ignored.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.2-3
Check: R code for possible problems
Result: NOTE
    GAMBoost: no visible global function definition for ‘Matrix’
    cv.GAMBoost: no visible global function definition for ‘mclapply’
    estimPVal: no visible global function definition for ‘mclapply’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.2-3
Check: foreign function calls
Result: NOTE
    Calls with DUP != TRUE:
     .C("get_min_score_dev_binary_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     double(componentwise.no), index = integer(1), score = double(componentwise.no),
     dev = double(1), DUP = FALSE)
     .C("calc_dev_binary_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     double(componentwise.no), double(componentwise.no), res = double(componentwise.no),
     DUP = FALSE)
     .C("pre_sum_index", x.linear, as.integer(length(D)), as.integer(componentwise.no),
     as.integer(nrow(x.linear)), subset.index, linpen.index, as.double(D),
     as.double(weights), res = double(componentwise.no), DUP = FALSE)
     .C("get_min_score_dev_gaussian_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     pre.sum, index = integer(1), score = double(componentwise.no),
     dev = double(1), DUP = FALSE)
     .C("get_min_score_dev_general_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     double(componentwise.no), index = integer(1), score = double(componentwise.no),
     beta.delta = double(1), DUP = FALSE)
    DUP = FALSE is deprecated and will be disabled in future versions of R.
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.2-3
Check: foreign function calls
Result: NOTE
    Calls with DUP = FALSE:
     .C("get_min_score_dev_binary_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     double(componentwise.no), index = integer(1), score = double(componentwise.no),
     dev = double(1), DUP = FALSE)
     .C("calc_dev_binary_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     double(componentwise.no), double(componentwise.no), res = double(componentwise.no),
     DUP = FALSE)
     .C("pre_sum_index", x.linear, as.integer(length(D)), as.integer(componentwise.no),
     as.integer(nrow(x.linear)), subset.index, linpen.index, as.double(D),
     as.double(weights), res = double(componentwise.no), DUP = FALSE)
     .C("get_min_score_dev_gaussian_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     pre.sum, index = integer(1), score = double(componentwise.no),
     dev = double(1), DUP = FALSE)
     .C("get_min_score_dev_general_index", x.linear, as.integer(length(y)),
     as.integer(componentwise.no), as.integer(nrow(x.linear)),
     subset.index, linpen.index, as.double(y), as.double(actual.mu),
     as.double(actual.eta), as.double(D), as.double(weights),
     double(length(y)), as.double(fstruct$penalty.linear[linear.is.penalized]),
     double(componentwise.no), index = integer(1), score = double(componentwise.no),
     beta.delta = double(1), DUP = FALSE)
    DUP = FALSE is deprecated and may be disabled in future versions of R.
Flavor: r-release-osx-x86_64-mavericks