CRAN Package Check Results for Package GeneReg

Last updated on 2015-07-30 03:48:17.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.2 0.72 11.80 12.52 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.2 0.71 11.79 12.50 NOTE
r-devel-linux-x86_64-fedora-clang 1.1.2 24.45 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1.2 21.95 NOTE
r-devel-osx-x86_64-clang 1.1.2 24.54 NOTE
r-devel-windows-ix86+x86_64 1.1.2 5.00 23.00 28.00 NOTE
r-patched-linux-x86_64 1.1.2 0.72 11.88 12.60 NOTE
r-patched-solaris-sparc 1.1.2 158.50 NOTE
r-patched-solaris-x86 1.1.2 42.20 NOTE
r-release-linux-x86_64 1.1.2 0.76 11.81 12.57 NOTE
r-release-osx-x86_64-mavericks 1.1.2 NOTE
r-release-windows-ix86+x86_64 1.1.2 4.00 21.00 25.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1.2 5.00 26.00 31.00 NOTE

Check Details

Version: 1.1.2
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘igraph’ ‘splines’
     Please remove these calls from your code.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.2
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.GeneReg
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.1.2
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘timedelay.lm’
    Found the platform-specific device:
     ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    timedelay.lm: no visible global function definition for ‘lm’
    timedelay.lm: no visible global function definition for ‘AIC’
    timedelay.lm: no visible global function definition for ‘pdf’
    timedelay.lm: no visible global function definition for ‘x11’
    timedelay.lm: no visible global function definition for ‘rainbow’
    timedelay.lm: no visible global function definition for ‘title’
    timedelay.lm: no visible global function definition for ‘lines’
    timedelay.lm: no visible global function definition for ‘predict’
    timedelay.lm: no visible global function definition for ‘points’
    timedelay.lm: no visible global function definition for ‘legend’
    timedelay.lm: no visible global function definition for ‘dev.off’
    timedelay.univariate.lm: no visible global function definition for ‘lm’
    timedelay.univariate.lm: no visible global function definition for
     ‘AIC’
    ts.bspline: no visible global function definition for ‘lm’
    ts.bspline: no visible global function definition for ‘predict’
    Undefined global functions or variables:
     AIC dev.off legend lines lm pdf points predict rainbow title x11
    Consider adding
     importFrom("grDevices", "dev.off", "pdf", "rainbow", "x11")
     importFrom("graphics", "legend", "lines", "points", "title")
     importFrom("stats", "AIC", "lm", "predict")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.1.2
Check: Rd files
Result: NOTE
    prepare_Rd: GeneReg-package.Rd:12-13: Dropping empty section \usage
    prepare_Rd: GeneReg-package.Rd:14-15: Dropping empty section \arguments
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.2
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘timedelay.lm’
    Found the platform-specific device:
     ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
Flavors: r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.1.2
Check: R code for possible problems
Result: NOTE
    timedelay.lm: no visible global function definition for 'lm'
    timedelay.lm: no visible global function definition for 'AIC'
    timedelay.lm: no visible global function definition for 'pdf'
    timedelay.lm: no visible global function definition for 'x11'
    timedelay.lm: no visible global function definition for 'rainbow'
    timedelay.lm: no visible global function definition for 'title'
    timedelay.lm: no visible global function definition for 'lines'
    timedelay.lm: no visible global function definition for 'predict'
    timedelay.lm: no visible global function definition for 'points'
    timedelay.lm: no visible global function definition for 'legend'
    timedelay.lm: no visible global function definition for 'dev.off'
    timedelay.univariate.lm: no visible global function definition for 'lm'
    timedelay.univariate.lm: no visible global function definition for
     'AIC'
    ts.bspline: no visible global function definition for 'lm'
    ts.bspline: no visible global function definition for 'predict'
    Undefined global functions or variables:
     AIC dev.off legend lines lm pdf points predict rainbow title x11
    Consider adding
     importFrom("grDevices", "dev.off", "pdf", "rainbow", "x11")
     importFrom("graphics", "legend", "lines", "points", "title")
     importFrom("stats", "AIC", "lm", "predict")
    to your NAMESPACE.
Flavor: r-devel-windows-ix86+x86_64