CRAN Package Check Results for Package HAP.ROR

Last updated on 2014-07-30 16:46:56.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 1.13 23.91 25.04 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 1.46 24.91 26.38 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 54.70 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 51.38 NOTE
r-devel-osx-x86_64-clang 1.0 48.01 NOTE
r-devel-windows-ix86+x86_64 1.0 4.00 40.00 44.00 NOTE
r-patched-linux-x86_64 1.0 1.10 24.16 25.26 NOTE
r-patched-solaris-sparc 1.0 295.90 NOTE
r-patched-solaris-x86 1.0 66.80 NOTE
r-release-linux-ix86 1.0 1.45 32.11 33.56 NOTE
r-release-linux-x86_64 1.0 1.14 24.77 25.91 NOTE
r-release-osx-x86_64-mavericks 1.0 NOTE
r-release-osx-x86_64-snowleopard 1.0 ERROR
r-release-windows-ix86+x86_64 1.0 4.00 39.00 43.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 4.00 39.00 43.00 NOTE

Check Details

Version: 1.0
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ape which was already attached by Depends.
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     ape hash
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter Creating R
    packages of the Writing R Extensions manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: Rd line widths
Result: NOTE
    Rd file 'HAP.ROR-package.Rd':
     \examples lines wider than 100 characters:
     ODS.ror(case.sub=case.sub, ctl.sub=ctl.sub, lib.sub=lib.sub, lib.sub.names=lib.sub.names, records=ror.res$records, dev.list=ror.res$dev ... [TRUNCATED]
    
    Rd file 'HAP.ror.Rd':
     \usage lines wider than 90 characters:
     HAP.ror(case.sub, ctl.sub, lib.sub, lib.sub.names, alpha = 0.01, ref.level = NA, display.proc = TRUE)
    
    Rd file 'ODS.ror.Rd':
     \usage lines wider than 90 characters:
     ODS.ror(case.sub, ctl.sub, lib.sub, lib.sub.names, records, dev.list, AIC.list, deleted.snps.ls, proteinf, locus = "DRB1*", ref.level = ... [TRUNCATED]
     \examples lines wider than 100 characters:
     ODS.ror(case.sub=case.sub, ctl.sub=ctl.sub, lib.sub=lib.sub, lib.sub.names=lib.sub.names, records=ror.res$records, dev.list=ror.res$dev ... [TRUNCATED]
    
    Rd file 'cc.sim.Rd':
     \usage lines wider than 90 characters:
     cc.sim(n.ctrl, n.case, beta0, beta1, case.sub, ctl.sub, lib.sub, lib.sub.names, risk.type = "AA", risk.inx = 2, risk.names = c("301", " ... [TRUNCATED]
    
    Rd file 'deletion.Rd':
     \usage lines wider than 90 characters:
     deletion(lib, lib.names, case.sub, ctl.sub, aic.now, dev.now, df.now, rank = FALSE, cut = -1, delete.snp = -1, ref = "NA", alpha = 0.05 ... [TRUNCATED]
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-release-osx-x86_64-snowleopard