CRAN Package Check Results for Package HMPTrees

Last updated on 2015-04-25 03:47:44.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2 1.09 18.27 19.36 NOTE
r-devel-linux-x86_64-debian-gcc 1.2 0.83 17.81 18.64 NOTE
r-devel-linux-x86_64-fedora-clang 1.2 37.99 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2 37.12 NOTE
r-devel-osx-x86_64-clang 1.2 42.94 NOTE
r-devel-windows-ix86+x86_64 1.2 4.00 29.00 33.00 NOTE
r-patched-linux-x86_64 1.2 0.82 18.14 18.96 NOTE
r-patched-solaris-sparc 1.2 241.80 NOTE
r-patched-solaris-x86 1.2 49.00 NOTE
r-release-linux-x86_64 1.2 0.85 18.38 19.23 NOTE
r-release-osx-x86_64-mavericks 1.2 NOTE
r-release-osx-x86_64-snowleopard 1.2 NOTE
r-release-windows-ix86+x86_64 1.2 3.00 30.00 33.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2 4.00 33.00 37.00 NOTE

Check Details

Version: 1.2
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     'HMP' 'doParallel'
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
    Package in Depends field not imported from: 'ape'
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.2
Check: R code for possible problems
Result: NOTE
    compareTwoDataSets: no visible global function definition for
     'makeCluster'
    compareTwoDataSets: no visible global function definition for
     'registerDoParallel'
    compareTwoDataSets: no visible global function definition for '%dopar%'
    compareTwoDataSets: no visible global function definition for 'foreach'
    compareTwoDataSets: no visible global function definition for 'icount'
    compareTwoDataSets: no visible global function definition for
     'stopCluster'
    generateTree: no visible global function definition for 'dirmult'
    generateTree: no visible global function definition for 'DM.MoM'
    generateTree: no visible global function definition for
     'Dirichlet.multinomial'
    traverseTree: no visible global function definition for 'read.tree'
    traverseTree: no visible global function definition for
     'collapse.singles'
Flavors: r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64