CRAN Package Check Results for Package HyPhy

Last updated on 2014-07-28 23:46:58.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 1.04 17.80 18.84 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 1.08 17.82 18.91 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 39.48 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 37.81 NOTE
r-devel-osx-x86_64-clang 1.0 36.90 NOTE
r-devel-windows-ix86+x86_64 1.0 5.00 32.00 37.00 NOTE
r-patched-linux-x86_64 1.0 1.03 17.94 18.97 NOTE
r-patched-solaris-sparc 1.0 217.90 NOTE
r-patched-solaris-x86 1.0 50.90 NOTE
r-release-linux-ix86 1.0 1.50 25.30 26.80 NOTE
r-release-linux-x86_64 1.0 1.10 18.24 19.35 NOTE
r-release-osx-x86_64-mavericks 1.0 NOTE
r-release-osx-x86_64-snowleopard 1.0 ERROR
r-release-windows-ix86+x86_64 1.0 5.00 29.00 34.00 NOTE
r-oldrel-windows-ix86+x86_64 1.0 4.00 31.00 35.00 NOTE

Check Details

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     R.utils ape
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter Creating R
    packages of the Writing R Extensions manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0
Check: Rd line widths
Result: NOTE
    Rd file 'requiprobable.Rd':
     \examples lines wider than 100 characters:
     for (i in 1:10) unlabeled[[i]]$tip.label<-sample(c("A1","A2","B1","B2","B3","C1","C2","C3","C4","C5"))
    
    Rd file 'rgenetree.Rd':
     \examples lines wider than 100 characters:
     ##Now lets start with 3 genes, set the number of genes at each tip of spec and vary mu between the branches of spec
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0
Check: whether package can be installed
Result: ERROR
    Installation failed.
    See /Volumes/XT3/Builds/R-dev-web/QA/Simon/packages/snowleopard-x86_64/results/3.1/HyPhy.Rcheck/00install.out for details.
Flavor: r-release-osx-x86_64-snowleopard