CRAN Package Check Results for Package IPMpack

Last updated on 2014-04-20 21:46:49.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1 5.00 90.48 95.48 OK
r-devel-linux-x86_64-debian-gcc 2.1 4.99 89.56 94.55 OK
r-devel-linux-x86_64-fedora-clang 2.1 210.47 OK
r-devel-linux-x86_64-fedora-gcc 2.1 202.55 OK
r-devel-macosx-x86_64-clang 2.1 160.04 OK
r-devel-macosx-x86_64-gcc 2.1 ERROR
r-devel-windows-ix86+x86_64 2.1 13.00 132.00 145.00 OK
r-patched-linux-x86_64 2.1 4.99 91.21 96.20 OK
r-patched-solaris-sparc 2.1 1062.30 OK
r-patched-solaris-x86 2.1 246.00 OK
r-release-linux-ix86 OK
r-release-linux-x86_64 2.1 5.01 89.94 94.94 OK
r-release-macosx-x86_64 2.1 OK
r-release-windows-ix86+x86_64 2.1 17.00 133.00 150.00 OK
r-oldrel-windows-ix86+x86_64 2.1 14.00 115.00 129.00 OK

Check Details

Version: 2.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘fields’
Flavor: r-devel-macosx-x86_64-gcc

Version: 2.1
Check: examples
Result: ERROR
    Running examples in ‘IPMpack-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: makeIPMmatrix
    > ### Title: Builds IPM matrices.
    > ### Aliases: makeIPMmatrix
    >
    > ### ** Examples
    >
    > dff <- generateData()
    > Pmatrix <- makeIPMPmatrix(
    + growObj = makeGrowthObj(dff),
    + survObj = makeSurvObj(dff),
    + nBigMatrix=20,
    + minSize = min(dff$size, na.rm = TRUE),
    + maxSize=max(dff$size, na.rm=TRUE))
    > dff$fec[dff$fec==0] <- NA
    > fv1 <- makeFecObj(dff, Formula = fec~size, Transform = "log")
    > Fmatrix <- makeIPMFmatrix(
    + fecObj = fv1,
    + nBigMatrix = 20,
    + minSize = min(dff$size, na.rm = TRUE),
    + maxSize = max(dff$size, na.rm = TRUE))
    > IPMmatrix <- makeIPMmatrix(Pmatrix,Fmatrix)
    > slotNames(IPMmatrix)
    [1] ".Data" "nDiscrete" "nEnvClass" "nBigMatrix"
    [5] "meshpoints" "env.index" "names.discrete"
    >
    > require(fields)
    Loading required package: fields
    Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
     there is no package called ‘fields’
    > par(mfrow=c(2,2))
    > image.plot(IPMmatrix@meshpoints, IPMmatrix@meshpoints, t(Pmatrix),
    + xlab = "Size(t)",
    + ylab = "Size(t+1)",
    + main = "Survival/Growth Kernel")
    Error: could not find function "image.plot"
    Execution halted
Flavor: r-devel-macosx-x86_64-gcc