CRAN Package Check Results for Package MALDIquant

Last updated on 2016-05-03 16:47:06.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 1.14 2.31 36.45 38.76 OK
r-devel-linux-x86_64-fedora-clang 1.14 68.73 OK
r-devel-linux-x86_64-fedora-gcc 1.14 66.11 OK
r-devel-osx-x86_64-clang 1.14 76.55 OK
r-devel-windows-ix86+x86_64 1.14 11.00 96.00 107.00 OK
r-patched-linux-x86_64 1.14 2.40 35.93 38.34 OK
r-patched-solaris-sparc 1.14 457.40 OK
r-patched-solaris-x86 1.14 94.30 OK
r-release-linux-x86_64 1.14 2.57 37.82 40.39 OK
r-release-osx-x86_64-mavericks 1.14 OK
r-release-windows-ix86+x86_64 1.14 14.00 89.00 103.00 OK
r-oldrel-windows-ix86+x86_64 1.13 14.00 44.00 58.00 ERROR

Check Details

Version: 1.13
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'MALDIquant-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: calibrateIntensity-methods
    > ### Title: Calibrates intensities of a MassSpectrum object.
    > ### Aliases: calibrateIntensity calibrateIntensity,MassSpectrum-method
    > ### calibrateIntensity,list-method
    > ### Keywords: methods
    >
    > ### ** Examples
    >
    > ## load package
    > library("MALDIquant")
    >
    > ## load example data
    > data("fiedler2009subset", package="MALDIquant")
    >
    > ## baseline correction
    > b <- removeBaseline(fiedler2009subset)
    >
    > ## calibrate intensity values
    > calibrateIntensity(b, method="TIC")
    Error in trim(object, range = range) :
     error in evaluating the argument 'range' in selecting a method for function 'trim': Error: argument "range" is missing, with no default
    Calls: calibrateIntensity ... .transformIntensity -> .local -> fun -> .scalingFactor -> trim
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 1.13
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'MALDIquant-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: calibrateIntensity-methods
    > ### Title: Calibrates intensities of a MassSpectrum object.
    > ### Aliases: calibrateIntensity calibrateIntensity,MassSpectrum-method
    > ### calibrateIntensity,list-method
    > ### Keywords: methods
    >
    > ### ** Examples
    >
    > ## load package
    > library("MALDIquant")
    >
    > ## load example data
    > data("fiedler2009subset", package="MALDIquant")
    >
    > ## baseline correction
    > b <- removeBaseline(fiedler2009subset)
    >
    > ## calibrate intensity values
    > calibrateIntensity(b, method="TIC")
    Error in trim(object, range = range) :
     error in evaluating the argument 'range' in selecting a method for function 'trim': Error: argument "range" is missing, with no default
    Calls: calibrateIntensity ... .transformIntensity -> .local -> fun -> .scalingFactor -> trim
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64