Last updated on 2014-04-23 07:55:02.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.7 | 1.91 | 30.69 | 32.60 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.7 | 1.91 | 31.34 | 33.25 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.7 | 65.58 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.7 | 62.73 | OK | |||
| r-devel-osx-x86_64-clang | 0.7 | 68.02 | OK | |||
| r-devel-osx-x86_64-gcc | 0.7 | ERROR | ||||
| r-devel-windows-ix86+x86_64 | 0.7 | 6.00 | 47.00 | 53.00 | OK | |
| r-patched-linux-x86_64 | 0.7 | 1.88 | 30.80 | 32.68 | OK | |
| r-patched-solaris-sparc | 0.7 | 301.20 | ERROR | |||
| r-patched-solaris-x86 | 0.7 | 72.40 | ERROR | |||
| r-release-linux-ix86 | 0.7 | 6.00 | 57.00 | 63.00 | OK | |
| r-release-linux-x86_64 | 0.7 | 1.88 | 31.39 | 33.26 | OK | |
| r-release-osx-x86_64-mavericks | 0.7 | ERROR | ||||
| r-release-osx-x86_64-snowleopard | 0.7 | OK | ||||
| r-release-windows-ix86+x86_64 | 0.7 | 6.00 | 50.00 | 56.00 | OK | |
| r-oldrel-windows-ix86+x86_64 | 0.7 | 6.00 | 58.00 | 64.00 | OK |
Version: 0.7
Check: package dependencies
Result: ERROR
Packages required but not available: ‘readMzXmlData’ ‘XML’
Package suggested but not available for checking: ‘knitr’
Files named as vignettes but with no recognized vignette engine:
‘inst/doc/MALDIquantForeign.Rnw’
(Is a VignetteBuilder field missing?)
See the information on DESCRIPTION files in the chapter ‘Creating R
packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-devel-osx-x86_64-gcc
Version: 0.7
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘MALDIquantForeign.Rnw’
...
download had nonzero exit status
Warning in .download(path[isUrl], verbose = verbose) :
Download of https://raw.github.com/sgibb/MALDIquantForeign/master/inst/exampledata/tiny1.mzML1.1.mzML failed!
Document is empty
Start tag expected, '<' not found
When sourcing ‘MALDIquantForeign.R’:
Error: 1: Document is empty
2: Start tag expected, '<' not found
Execution halted
Flavors: r-patched-solaris-sparc, r-patched-solaris-x86
Version: 0.7
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘RNetCDF’
Flavor: r-release-osx-x86_64-mavericks
Version: 0.7
Check: examples
Result: ERROR
Running examples in ‘MALDIquantForeign-Ex.R’ failed
The error most likely occurred in:
> ### Name: importCdf
> ### Title: Import CDF files
> ### Aliases: importCdf
>
> ### ** Examples
>
> library("MALDIquant")
> library("MALDIquantForeign")
>
> ## get example directory
> exampleDirectory <- system.file("exampledata", package="MALDIquantForeign")
>
> ## import
> s <- importCdf(exampleDirectory)
Loading required package: RNetCDF
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called ‘RNetCDF’
Error in FUN("/Builds/CRAN-QA-Simon/packages/mavericks-x86_64/results/3.1/MALDIquantForeign.Rcheck/MALDIquantForeign/exampledata/tiny.cdf"[[1L]], :
For netCDF support the ‘RNetCDF’ package is needed.
Please install ‘RNetCDF’: install.packages("RNetCDF}")
Calls: importCdf -> import -> unlist -> lapply -> FUN
Execution halted
Flavor: r-release-osx-x86_64-mavericks