CRAN Package Check Results for Package MASS

Last updated on 2017-01-22 23:48:29.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 7.3-45 10.05 47.92 57.97 ERROR
r-devel-linux-x86_64-debian-gcc 7.3-45 20.43 48.69 69.13 OK
r-devel-linux-x86_64-fedora-clang 7.3-45 54.20 OK --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 7.3-45 52.03 OK --no-stop-on-test-error
r-devel-macos-x86_64-clang 7.3-45 88.39 ERROR --no-stop-on-test-error
r-devel-windows-ix86+x86_64 7.3-45 33.00 106.00 139.00 ERROR
r-patched-linux-x86_64 7.3-45 7.42 48.75 56.18 ERROR
r-patched-solaris-sparc 7.3-45 OK
r-patched-solaris-x86 7.3-45 OK
r-release-linux-x86_64 7.3-45 11.59 46.97 58.56 ERROR
r-release-osx-x86_64-mavericks 7.3-45 OK
r-release-windows-ix86+x86_64 7.3-45 44.00 127.00 171.00 ERROR
r-oldrel-windows-ix86+x86_64 7.3-45 51.00 135.00 186.00 ERROR

Check Details

Version: 7.3-45
Check: tests
Result: ERROR
     Running ‘confint.R’ [0s/0s]
     Running ‘fitdistr.R’ [0s/0s]
     Comparing ‘fitdistr.Rout’ to ‘fitdistr.Rout.save’ ... OK
     Running ‘glm.nb.R’ [0s/0s]
     Running ‘hubers.R’ [0s/0s]
     Running ‘lme.R’ [0s/0s]
    Running the tests in ‘tests/lme.R’ failed.
    Last 13 lines of output:
     > ## stepAIC on an lme object: an example from Robert Cuffe
     > library(nlme)
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 7.3-45
Flags: --no-stop-on-test-error
Check: tests
Result: ERROR
     Running ‘confint.R’
     Running ‘fitdistr.R’
     Comparing ‘fitdistr.Rout’ to ‘fitdistr.Rout.save’ ... OK
     Running ‘glm.nb.R’
     Running ‘hubers.R’
     Running ‘lme.R’
     Running ‘polr.R’
     Running ‘profile.R’
     Running ‘regression.R’
     Comparing ‘regression.Rout’ to ‘regression.Rout.save’ ... OK
     Running ‘rlm.R’
     Running ‘scripts.R’
    Running the tests in ‘tests/lme.R’ failed.
    Complete output:
     > ## stepAIC on an lme object: an example from Robert Cuffe
     > library(nlme)
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavor: r-devel-macos-x86_64-clang

Version: 7.3-45
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'confint.R' [0s]
     Running 'fitdistr.R' [0s]
     Comparing 'fitdistr.Rout' to 'fitdistr.Rout.save' ... OK
     Running 'glm.nb.R' [0s]
     Running 'hubers.R' [0s]
     Running 'lme.R' [1s]
    Running the tests in 'tests/lme.R' failed.
    Last 13 lines of output:
     > ## stepAIC on an lme object: an example from Robert Cuffe
     > library(nlme)
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 7.3-45
Check: running tests for arch ‘x64’
Result: ERROR
     Running 'confint.R' [0s]
     Running 'fitdistr.R' [0s]
     Comparing 'fitdistr.Rout' to 'fitdistr.Rout.save' ... OK
     Running 'glm.nb.R' [1s]
     Running 'hubers.R' [0s]
     Running 'lme.R' [1s]
    Running the tests in 'tests/lme.R' failed.
    Last 13 lines of output:
     > ## stepAIC on an lme object: an example from Robert Cuffe
     > library(nlme)
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 7.3-45
Check: tests
Result: ERROR
    Running the tests in ‘tests/lme.R’ failed.
    Last 13 lines of output:
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavor: r-release-linux-x86_64

Version: 7.3-45
Check: running tests for arch ‘i386’
Result: ERROR
    Running the tests in 'tests/lme.R' failed.
    Last 13 lines of output:
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 7.3-45
Check: running tests for arch ‘x64’
Result: ERROR
    Running the tests in 'tests/lme.R' failed.
    Last 13 lines of output:
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64