CRAN Package Check Results for Package MCMCglmm

Last updated on 2014-09-16 21:47:37.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.21 13.96 74.40 88.36 NOTE
r-devel-linux-x86_64-debian-gcc 2.21 14.25 73.80 88.05 NOTE
r-devel-linux-x86_64-fedora-clang 2.21 204.73 NOTE
r-devel-linux-x86_64-fedora-gcc 2.21 186.82 NOTE
r-devel-osx-x86_64-clang 2.21 143.37 NOTE
r-devel-windows-ix86+x86_64 2.21 100.00 122.00 222.00 NOTE
r-patched-linux-x86_64 2.21 14.54 65.01 79.56 OK
r-patched-solaris-sparc 2.21 1057.60 OK
r-patched-solaris-x86 2.21 267.30 OK
r-release-linux-ix86 2.21 19.29 83.54 102.83 OK
r-release-linux-x86_64 2.21 14.66 76.06 90.73 OK
r-release-osx-x86_64-mavericks 2.21 NOTE
r-release-osx-x86_64-snowleopard 2.21 OK
r-release-windows-ix86+x86_64 2.21 89.00 137.00 226.00 OK
r-oldrel-windows-ix86+x86_64 2.21 90.00 131.00 221.00 OK

Check Details

Version: 2.21
Check: R code for possible problems
Result: NOTE
    Ddivergence: no visible global function definition for ‘rmvnorm’
    Ddivergence: no visible global function definition for ‘dmvnorm’
    KPPM: no visible global function definition for ‘permn’
    ellipsoid3d: no visible global function definition for ‘par3d’
    ellipsoid3d: no visible global function definition for ‘rgl.cur’
    ellipsoid3d: no visible global function definition for ‘quads3d’
    ellipsoid3d: no visible global function definition for ‘rotate3d’
    ellipsoid3d: no visible global function definition for ‘qmesh3d’
    leg: no visible global function definition for ‘legendre.polynomials’
    plotsubspace: no visible global function definition for ‘clear3d’
    plotsubspace: no visible global function definition for ‘rotate3d’
    plotsubspace: no visible global function definition for ‘shade3d’
    plotsubspace: no visible global function definition for ‘wire3d’
    plotsubspace: no visible global function definition for ‘axes3d’
    plotsubspace: no visible global function definition for ‘title3d’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 2.21
Check: compiled code
Result: NOTE
    File ‘MCMCglmm/libs/MCMCglmm.so’:
     Found ‘rand’, possibly from ‘rand’ (C)
     Object: ‘cs_randperm.o’
     Found ‘srand’, possibly from ‘srand’ (C)
     Object: ‘cs_randperm.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the C RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 2.21
Check: compiled code
Result: NOTE
    File ‘MCMCglmm/libs/MCMCglmm.so’:
     Found ‘_rand’, possibly from ‘rand’ (C)
     Object: ‘cs_randperm.o’
     Found ‘_srand’, possibly from ‘srand’ (C)
     Object: ‘cs_randperm.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the C RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-devel-osx-x86_64-clang

Version: 2.21
Check: compiled code
Result: NOTE
    File 'MCMCglmm/libs/i386/MCMCglmm.dll':
     Found 'rand', possibly from 'rand' (C)
     Object: 'cs_randperm.o'
     Found 'srand', possibly from 'srand' (C)
     Object: 'cs_randperm.o'
    File 'MCMCglmm/libs/x64/MCMCglmm.dll':
     Found 'rand', possibly from 'rand' (C)
     Object: 'cs_randperm.o'
     Found 'srand', possibly from 'srand' (C)
     Object: 'cs_randperm.o'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the C RNG.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavor: r-devel-windows-ix86+x86_64

Version: 2.21
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'CourseNotes.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `tocbibind.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    n_test/MCMCglmm/vignettes/CourseNotes.tex:14: ==> Fatal error occurred, no out
    put PDF file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64-mavericks