CRAN Package Check Results for Package MIPHENO

Last updated on 2016-06-26 11:48:17.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 1.2 2.51 29.86 32.37 NOTE
r-devel-linux-x86_64-fedora-clang 1.2 62.32 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2 59.15 NOTE
r-devel-osx-x86_64-clang 1.2 48.97 NOTE
r-devel-windows-ix86+x86_64 1.2 9.00 80.00 89.00 NOTE
r-patched-linux-x86_64 1.2 2.84 30.54 33.39 NOTE
r-patched-solaris-sparc 1.2 373.00 NOTE
r-patched-solaris-x86 1.2 84.50 NOTE
r-release-linux-x86_64 1.2 2.42 30.08 32.50 NOTE
r-release-osx-x86_64-mavericks 1.2 NOTE
r-release-windows-ix86+x86_64 1.2 6.00 49.00 55.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2 10.00 77.00 87.00 OK

Check Details

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cdf.pval: no visible global function definition for ‘median’
    cdf.pval: no visible binding for global variable ‘ecdf’
    find_hits: no visible global function definition for ‘na.omit’
    mad.scores: no visible global function definition for ‘as.formula’
    mad.scores: no visible binding for global variable ‘median’
    mad.scores: no visible binding for global variable ‘mad’
    rm.outliers: no visible global function definition for ‘as.formula’
    rm.outliers: no visible binding for global variable ‘median’
    rm.outliers: no visible binding for global variable ‘mad’
    Undefined global functions or variables:
     as.formula ecdf mad median na.omit
    Consider adding
     importFrom("stats", "as.formula", "ecdf", "mad", "median", "na.omit")
    to your NAMESPACE file.
    
    Found the following calls to attach():
    File ‘MIPHENO/R/cdf.pval.R’:
     attach(sample.cdf)
    See section ‘Good practice’ in ‘?attach’.
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cdf.pval: no visible global function definition for ‘median’
    cdf.pval: no visible binding for global variable ‘ecdf’
    find_hits: no visible global function definition for ‘na.omit’
    mad.scores: no visible global function definition for ‘as.formula’
    mad.scores: no visible binding for global variable ‘median’
    mad.scores: no visible binding for global variable ‘mad’
    rm.outliers: no visible global function definition for ‘as.formula’
    rm.outliers: no visible binding for global variable ‘median’
    rm.outliers: no visible binding for global variable ‘mad’
    Undefined global functions or variables:
     as.formula ecdf mad median na.omit
    Consider adding
     importFrom("stats", "as.formula", "ecdf", "mad", "median", "na.omit")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64