CRAN Package Check Results for Package MLDS

Last updated on 2015-06-30 22:47:25.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.3 0.80 31.08 31.88 NOTE
r-devel-linux-x86_64-debian-gcc 0.4.3 0.85 29.95 30.80 NOTE
r-devel-linux-x86_64-fedora-clang 0.4.3 60.43 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4.3 58.05 NOTE
r-devel-osx-x86_64-clang 0.4.3 51.16 NOTE
r-devel-windows-ix86+x86_64 0.4.3 7.00 50.00 57.00 NOTE
r-patched-linux-x86_64 0.4.3 0.82 32.07 32.90 OK
r-patched-solaris-sparc 0.4.3 365.90 NOTE
r-patched-solaris-x86 0.4.3 68.70 NOTE
r-release-linux-x86_64 0.4.3 0.96 30.50 31.46 OK
r-release-osx-x86_64-mavericks 0.4.3 OK
r-release-windows-ix86+x86_64 0.4.3 6.00 47.00 53.00 OK
r-oldrel-windows-ix86+x86_64 0.4.3 6.00 51.00 57.00 OK

Check Details

Version: 0.4.3
Check: R code for possible problems
Result: NOTE
    DisplayOneQuad: no visible global function definition for ‘plot’
    DisplayOneTriad: no visible global function definition for ‘plot’
    Get6pts: no visible global function definition for ‘combn’
    Get6pts: no visible global function definition for ‘complete.cases’
    SimMLDS: no visible global function definition for ‘rnorm’
    binom.diagnostics: no visible global function definition for ‘fitted’
    binom.diagnostics : <anonymous>: no visible global function definition
     for ‘rbinom’
    binom.diagnostics : <anonymous>: no visible global function definition
     for ‘fitted’
    binom.diagnostics : <anonymous>: no visible global function definition
     for ‘residuals’
    binom.diagnostics: no visible global function definition for
     ‘residuals’
    boot.mlbs: no visible global function definition for ‘fitted’
    boot.mlbs: no visible global function definition for ‘rbinom’
    boot.mlbs : <anonymous>: no visible global function definition for
     ‘glm.fit’
    boot.mlbs: Error while checking: invalid ‘envir’ argument
    boot.mlds: no visible global function definition for ‘fitted’
    boot.mlds: no visible global function definition for ‘rbinom’
    boot.mlds : <anonymous>: no visible global function definition for
     ‘glm.fit’
    boot.mlds: Error while checking: invalid ‘envir’ argument
    fitted.mlbs: no visible global function definition for ‘fitted’
    fitted.mlds: no visible global function definition for ‘fitted’
    fitted.mlds: Error while checking: invalid ‘envir’ argument
    lik6pt: no visible global function definition for ‘predict’
    lines.mlbs: no visible global function definition for ‘lines’
    lines.mlds: no visible global function definition for ‘lines’
    logLik.mlbs: no visible global function definition for ‘logLik’
    logLik.mlds: no visible global function definition for ‘logLik’
    mlds.formula: Error while checking: invalid ‘envir’ argument
    mlds.mlbs.df: no visible global function definition for ‘glm.control’
    mlds.mlbs.df : <anonymous>: no visible global function definition for
     ‘as.formula’
    mlds.mlbs.df : <anonymous>: no visible global function definition for
     ‘model.matrix’
    mlds.mlbs.df: no visible global function definition for ‘glm’
    mlds.mlbs.df: Error while checking: invalid ‘envir’ argument
    mlds.mlds.df: no visible global function definition for ‘glm.control’
    mlds.mlds.df : <anonymous>: no visible global function definition for
     ‘as.formula’
    mlds.mlds.df : <anonymous>: no visible global function definition for
     ‘model.matrix’
    mlds.mlds.df: no visible global function definition for ‘glm’
    mlds.mlds.df: Error while checking: invalid ‘envir’ argument
    plot.mlbs: no visible global function definition for ‘par’
    plot.mlbs: no visible global function definition for ‘plot’
    plot.mlds: no visible global function definition for ‘par’
    plot.mlds: no visible global function definition for ‘plot’
    plot.mlds.diag: no visible global function definition for ‘par’
    plot.mlds.diag: no visible global function definition for ‘plot’
    plot.mlds.diag: no visible global function definition for ‘lines’
    plot.mlds.diag: no visible global function definition for ‘hist’
    plot.mlds.diag: no visible global function definition for ‘abline’
    pmc: no visible global function definition for ‘predict’
    points.mlbs: no visible global function definition for ‘points’
    points.mlds: no visible global function definition for ‘points’
    predict.mlbs: no visible global function definition for ‘predict’
    predict.mlbs : <anonymous>: no visible global function definition for
     ‘as.formula’
    predict.mlbs : <anonymous>: no visible global function definition for
     ‘model.matrix’
    predict.mlds: no visible global function definition for ‘predict’
    predict.mlds: Error while checking: invalid ‘envir’ argument
    runQuadExperiment: no visible global function definition for ‘combn’
    runQuadExperiment: no visible global function definition for ‘rbinom’
    runQuadExperiment: no visible binding for global variable ‘dev.new’
    runQuadExperiment: no visible global function definition for ‘par’
    runQuadExperiment: no visible global function definition for
     ‘graphics.off’
    runTriadExperiment: no visible global function definition for ‘combn’
    runTriadExperiment: no visible global function definition for ‘rbinom’
    runTriadExperiment: no visible binding for global variable ‘dev.new’
    runTriadExperiment: no visible global function definition for ‘par’
    runTriadExperiment: no visible global function definition for
     ‘graphics.off’
    simu.6pt: no visible global function definition for ‘fitted’
    simu.6pt: no visible global function definition for ‘rbinom’
    simu.6pt: no visible global function definition for ‘glm.control’
    summary.mlbs: no visible global function definition for ‘logLik’
    summary.mlds: no visible global function definition for ‘logLik’
    summary.mlds.bt: no visible global function definition for ‘sd’
    vcov.mlbs: no visible global function definition for ‘vcov’
    vcov.mlds: no visible global function definition for ‘vcov’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.4.3
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Warning: glm.fit: fitted probabilities numerically 0 or 1 occurred
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'MLDS.tex' failed.
    LaTeX errors:
    ! LaTeX Error: Unknown float option `d'.
    
    See the LaTeX manual or LaTeX Companion for explanation.
    Type H <return> for immediate help.
     ...
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-solaris-sparc, r-patched-solaris-x86