CRAN Package Check Results for Package MetabolAnalyze

Last updated on 2015-08-30 17:48:18.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3 1.13 16.17 17.30 NOTE
r-devel-linux-x86_64-debian-gcc 1.3 0.80 16.05 16.85 NOTE
r-devel-linux-x86_64-fedora-clang 1.3 32.46 NOTE
r-devel-linux-x86_64-fedora-gcc 1.3 30.08 NOTE
r-devel-osx-x86_64-clang 1.3 31.87 NOTE
r-devel-windows-ix86+x86_64 1.3 5.00 33.00 38.00 NOTE
r-patched-linux-x86_64 1.3 0.93 16.75 17.68 NOTE
r-patched-solaris-sparc 1.3 211.00 NOTE --no-examples
r-patched-solaris-x86 1.3 47.80 NOTE
r-release-linux-x86_64 1.3 0.92 16.68 17.61 NOTE
r-release-osx-x86_64-mavericks 1.3 NOTE
r-release-windows-ix86+x86_64 1.3 5.00 44.00 49.00 NOTE
r-oldrel-windows-ix86+x86_64 1.3 8.00 42.00 50.00 OK

Check Details

Version: 1.3
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Title field: should not end in a period.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.3
Check: R code for possible problems
Result: NOTE
    ht: no visible binding for global variable ‘dist’
    ht: no visible binding for global variable ‘hclust’
    ht : <anonymous>: no visible global function definition for ‘reorder’
    ht: no visible global function definition for ‘as.dendrogram’
    ht: no visible global function definition for ‘order.dendrogram’
    ht: no visible binding for global variable ‘sd’
    ht: no visible global function definition for ‘par’
    ht: no visible global function definition for ‘layout’
    ht: no visible global function definition for ‘image’
    ht: no visible global function definition for ‘points’
    ht: no visible global function definition for ‘axis’
    ht: no visible global function definition for ‘mtext’
    ht: no visible global function definition for ‘plot’
    ht: no visible global function definition for ‘frame’
    ht: no visible global function definition for ‘title’
    loadings.plot: no visible global function definition for ‘plot’
    loadings.plot: no visible global function definition for ‘text’
    loadings.plot: no visible global function definition for ‘abline’
    loadings.plot: no visible global function definition for ‘pairs’
    loadings.plot : <anonymous>: no visible global function definition for
     ‘text’
    loadings.plot : <anonymous>: no visible global function definition for
     ‘abline’
    mppca.loadings.plot: no visible global function definition for ‘plot’
    mppca.loadings.plot: no visible global function definition for ‘text’
    mppca.loadings.plot: no visible global function definition for ‘abline’
    mppca.loadings.plot: no visible global function definition for ‘pairs’
    mppca.loadings.plot : <anonymous>: no visible global function
     definition for ‘text’
    mppca.loadings.plot : <anonymous>: no visible global function
     definition for ‘abline’
    mppca.metabol: no visible global function definition for ‘cmdscale’
    mppca.metabol: no visible global function definition for ‘dist’
    mppca.metabol: no visible global function definition for ‘cov’
    mppca.metabol: no visible global function definition for ‘rnorm’
    mppca.metabol: no visible global function definition for ‘plot’
    mppca.metabol: no visible global function definition for ‘abline’
    mppca.scores.plot: no visible global function definition for ‘plot’
    mppca.scores.plot: no visible global function definition for ‘legend’
    mppca.scores.plot: no visible global function definition for ‘abline’
    mppca.scores.plot: no visible global function definition for ‘points’
    ppca.metabol: no visible global function definition for ‘cmdscale’
    ppca.metabol: no visible global function definition for ‘dist’
    ppca.metabol: no visible global function definition for ‘plot’
    ppca.metabol: no visible global function definition for ‘abline’
    ppca.metabol.jack: no visible binding for global variable ‘var’
    ppca.metabol.jack: no visible global function definition for ‘qnorm’
    ppca.metabol.jack: no visible global function definition for ‘plot’
    ppca.scores.plot: no visible global function definition for ‘plot’
    ppca.scores.plot: no visible global function definition for ‘legend’
    ppca.scores.plot: no visible global function definition for ‘abline’
    ppca.scores.plot: no visible global function definition for ‘points’
    ppcca.metabol: no visible global function definition for ‘glm’
    ppcca.metabol: no visible binding for global variable ‘gaussian’
    ppcca.metabol: no visible global function definition for ‘plot’
    ppcca.metabol: no visible global function definition for ‘abline’
    ppcca.metabol.jack: no visible binding for global variable ‘var’
    ppcca.metabol.jack: no visible global function definition for ‘qnorm’
    ppcca.metabol.jack: no visible global function definition for ‘plot’
    ppcca.scores.plot: no visible global function definition for ‘plot’
    ppcca.scores.plot: no visible global function definition for ‘legend’
    ppcca.scores.plot: no visible global function definition for ‘abline’
    ppcca.scores.plot: no visible global function definition for ‘points’
    scaling: no visible binding for global variable ‘sd’
    scaling: no visible binding for global variable ‘var’
    Undefined global functions or variables:
     abline as.dendrogram axis cmdscale cov dist frame gaussian glm hclust
     image layout legend mtext order.dendrogram pairs par plot points
     qnorm reorder rnorm sd text title var
    Consider adding
     importFrom("graphics", "abline", "axis", "frame", "image", "layout",
     "legend", "mtext", "pairs", "par", "plot", "points", "text",
     "title")
     importFrom("stats", "as.dendrogram", "cmdscale", "cov", "dist",
     "gaussian", "glm", "hclust", "order.dendrogram", "qnorm",
     "reorder", "rnorm", "sd", "var")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.3
Check: Rd line widths
Result: NOTE
    Rd file 'ht.Rd':
     \usage lines wider than 90 characters:
     ht(x, Rowv = NULL, Colv = if (symm) "Rowv" else NULL, distfun = dist, hclustfun = hclust, reorderfun = function(d, w) reorder(d, w), ad ... [TRUNCATED]
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.3
Flags: --no-examples
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Title field: should not end in a period.
Flavor: r-patched-solaris-sparc