CRAN Package Check Results for Package NMF

Last updated on 2015-04-19 11:51:14.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.20.5 6.90 346.99 353.90 NOTE
r-devel-linux-x86_64-debian-gcc 0.20.5 6.98 330.68 337.66 NOTE
r-devel-linux-x86_64-fedora-clang 0.20.5 809.13 NOTE
r-devel-linux-x86_64-fedora-gcc 0.20.5 753.98 NOTE
r-devel-osx-x86_64-clang 0.20.5 615.87 NOTE
r-devel-windows-ix86+x86_64 0.20.5 36.00 829.00 865.00 NOTE
r-patched-linux-x86_64 0.20.5 6.83 349.85 356.68 NOTE
r-patched-solaris-sparc 0.20.5 1117.90 NOTE --no-tests --no-vignettes
r-patched-solaris-x86 0.20.5 663.90 NOTE --no-build-vignettes
r-release-linux-x86_64 0.20.5 7.29 337.36 344.65 NOTE
r-release-osx-x86_64-mavericks 0.20.5 NOTE
r-release-osx-x86_64-snowleopard 0.20.5 ERROR
r-release-windows-ix86+x86_64 0.20.5 18.00 623.00 641.00 NOTE
r-oldrel-windows-ix86+x86_64 0.20.5 34.00 975.00 1009.00 NOTE

Check Details

Version: 0.20.5
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘Biobase’ ‘bigmemory’ ‘devtools’ ‘knitr’ ‘synchronicity’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.20.5
Check: R code for possible problems
Result: NOTE
    devnmf: no visible global function definition for ‘load_all’
    nmfReport: no visible global function definition for ‘knit2html’
    posICA: no visible binding for global variable ‘fastICA’
    posICA: no visible global function definition for ‘fastICA’
    runit.lsnmf: no visible global function definition for ‘checkTrue’
    setupLibPaths: no visible global function definition for ‘load_all’
    test.match_atrack : .check: no visible global function definition for
     ‘checkEquals’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.20.5
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘RcppOctave’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang

Version: 0.20.5
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘RcppOctave’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang, r-release-osx-x86_64-mavericks

Version: 0.20.5
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     'RcppOctave' 'synchronicity'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 0.20.5
Check: Rd cross-references
Result: NOTE
    Packages unavailable to check Rd xrefs: 'RcppOctave', 'synchronicity'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.20.5
Flags: --no-tests --no-vignettes
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘RcppOctave’ ‘bigmemory’
Flavor: r-patched-solaris-sparc

Version: 0.20.5
Flags: --no-tests --no-vignettes
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘Biobase’ ‘bigmemory’ ‘devtools’ ‘knitr’ ‘synchronicity’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavor: r-patched-solaris-sparc

Version: 0.20.5
Flags: --no-tests --no-vignettes
Check: R code for possible problems
Result: NOTE
    devnmf: no visible global function definition for ‘load_all’
    nmfReport: no visible global function definition for ‘knit2html’
    posICA: no visible binding for global variable ‘fastICA’
    posICA: no visible global function definition for ‘fastICA’
    runit.lsnmf: no visible global function definition for ‘checkTrue’
    setupLibPaths: no visible global function definition for ‘load_all’
    test.match_atrack : .check: no visible global function definition for
     ‘checkEquals’
Flavor: r-patched-solaris-sparc

Version: 0.20.5
Flags: --no-tests --no-vignettes
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘RcppOctave’
Flavor: r-patched-solaris-sparc

Version: 0.20.5
Flags: --no-build-vignettes
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘RcppOctave’
Flavor: r-patched-solaris-x86

Version: 0.20.5
Flags: --no-build-vignettes
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘Biobase’ ‘bigmemory’ ‘devtools’ ‘knitr’ ‘synchronicity’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavor: r-patched-solaris-x86

Version: 0.20.5
Flags: --no-build-vignettes
Check: R code for possible problems
Result: NOTE
    devnmf: no visible global function definition for ‘load_all’
    nmfReport: no visible global function definition for ‘knit2html’
    posICA: no visible binding for global variable ‘fastICA’
    posICA: no visible global function definition for ‘fastICA’
    runit.lsnmf: no visible global function definition for ‘checkTrue’
    setupLibPaths: no visible global function definition for ‘load_all’
    test.match_atrack : .check: no visible global function definition for
     ‘checkEquals’
Flavor: r-patched-solaris-x86

Version: 0.20.5
Flags: --no-build-vignettes
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘RcppOctave’
Flavor: r-patched-solaris-x86

Version: 0.20.5
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘RcppOctave’ ‘doMPI’
Flavor: r-release-osx-x86_64-mavericks

Version: 0.20.5
Check: package dependencies
Result: ERROR
    Packages required but not available: ‘pkgmaker’ ‘rngtools’ ‘ggplot2’
    
    Packages suggested but not available for checking:
     ‘RcppOctave’ ‘doMPI’ ‘devtools’ ‘knitr’ ‘Biobase’
    
    VignetteBuilder package required for checking but installed: ‘knitr’
    
    Files named as vignettes but with no recognized vignette engine:
     ‘inst/doc/NMF-unitTests.Rnw’
     ‘inst/doc/NMF-vignette.Rnw’
     ‘inst/doc/heatmaps.Rnw’
    (Is a VignetteBuilder field missing?)
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64-snowleopard

Version: 0.20.5
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     'RcppOctave' 'doMPI' 'bigmemory' 'synchronicity'
Flavor: r-oldrel-windows-ix86+x86_64