CRAN Package Check Results for Package OptInterim

Last updated on 2015-09-01 10:51:02.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.0.1 0.76 22.26 23.02 NOTE
r-devel-linux-x86_64-debian-gcc 3.0.1 0.72 20.99 21.70 NOTE
r-devel-linux-x86_64-fedora-clang 3.0.1 44.59 NOTE
r-devel-linux-x86_64-fedora-gcc 3.0.1 39.59 NOTE
r-devel-osx-x86_64-clang 3.0.1 40.14 NOTE
r-devel-windows-ix86+x86_64 3.0.1 3.00 38.00 41.00 NOTE
r-patched-linux-x86_64 3.0.1 0.82 21.84 22.65 NOTE
r-patched-solaris-sparc 3.0.1 256.30 NOTE
r-patched-solaris-x86 3.0.1 54.90 NOTE
r-release-linux-x86_64 3.0.1 0.81 21.57 22.38 NOTE
r-release-osx-x86_64-mavericks 3.0.1 NOTE
r-release-windows-ix86+x86_64 3.0.1 3.00 55.00 58.00 NOTE
r-oldrel-windows-ix86+x86_64 3.0.1 5.00 51.00 56.00 OK

Check Details

Version: 3.0.1
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 3.0.1
Check: R code for possible problems
Result: NOTE
    FixDes: no visible global function definition for ‘qnorm’
    OptimDes: no visible global function definition for ‘optimize’
    OptimDes: no visible global function definition for ‘flush.console’
    OptimDes: no visible global function definition for ‘qlogis’
    OptimDes: no visible global function definition for ‘optim’
    OptimDes: no visible global function definition for ‘plogis’
    SimDes: no visible global function definition for ‘qnorm’
    SimDes: no visible global function definition for ‘pweibull’
    SimDes: no visible global function definition for ‘qbinom’
    SimDes: no visible global function definition for ‘pbinom’
    SimDes: no visible global function definition for ‘runif’
    SimDes: no visible global function definition for ‘uniroot’
    SimDes: no visible global function definition for ‘rbinom’
    SimDes: no visible global function definition for ‘rweibull’
    SimDes: no visible global function definition for ‘fisher.test’
    f.Des: no visible global function definition for ‘uniroot’
    f.Des: no visible global function definition for ‘qnorm’
    f.Des: no visible global function definition for ‘pnorm’
    f.DesWrap: no visible global function definition for ‘plogis’
    np.OptimDes: no visible global function definition for ‘optimize’
    np.OptimDes: no visible global function definition for ‘qlogis’
    np.OptimDes: no visible global function definition for ‘optim’
    np.OptimDes: no visible global function definition for ‘plogis’
    plot.OptimDes: no visible global function definition for ‘pnorm’
    powC1: no visible global function definition for ‘pnorm’
    powC2: no visible global function definition for ‘pnorm’
    powC2L: no visible global function definition for ‘pnorm’
    print.OptimDes: no visible global function definition for ‘pnorm’
    sig2: no visible global function definition for ‘integrate’
    single.exact: no visible global function definition for ‘qbinom’
    single.exact: no visible global function definition for ‘pbinom’
    spfun: no visible global function definition for ‘pnorm’
    spfun: no visible global function definition for ‘qnorm’
    Undefined global functions or variables:
     fisher.test flush.console integrate optim optimize pbinom plogis
     pnorm pweibull qbinom qlogis qnorm rbinom runif rweibull uniroot
    Consider adding
     importFrom("stats", "fisher.test", "integrate", "optim", "optimize",
     "pbinom", "plogis", "pnorm", "pweibull", "qbinom", "qlogis",
     "qnorm", "rbinom", "runif", "rweibull", "uniroot")
     importFrom("utils", "flush.console")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 3.0.1
Check: Rd line widths
Result: NOTE
    Rd file 'TestStage.Rd':
     \examples lines wider than 100 characters:
     object1 <- OptimDes(B.init,m.init,alpha,beta,param,x,target="EDA",sf="futility",num.arm=1,num.stage=2)
     mda <- ifelse(l>1,B.init[l-1]+(B.init[l]-B.init[l-1])*(n-sum(m.init[1:(l-1)]))/m.init[l],B.init[l]*(n/m.init[l]))
    
    Rd file 'np.OptimDes.Rd':
     \examples lines wider than 100 characters:
     object14 <- np.OptimDes(B.init,m.init,alpha,beta,param,x,pt=1.1,target="ETSL",sf="futility",num.arm=1,num.stage=2)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64