CRAN Package Check Results for Package OrgMassSpecR

Last updated on 2015-09-04 11:47:44.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4-4 0.72 21.51 22.23 NOTE
r-devel-linux-x86_64-debian-gcc 0.4-4 0.69 21.28 21.97 NOTE
r-devel-linux-x86_64-fedora-clang 0.4-4 42.73 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4-4 40.38 NOTE
r-devel-osx-x86_64-clang 0.4-4 39.62 OK
r-devel-windows-ix86+x86_64 0.4-4 3.00 36.00 39.00 NOTE
r-patched-linux-x86_64 0.4-4 0.81 21.57 22.38 OK
r-patched-solaris-sparc 0.4-4 289.10 OK
r-patched-solaris-x86 0.4-4 58.30 OK
r-release-linux-x86_64 0.4-4 0.77 21.42 22.18 OK
r-release-osx-x86_64-mavericks 0.4-4 OK
r-release-windows-ix86+x86_64 0.4-4 5.00 60.00 65.00 OK
r-oldrel-windows-ix86+x86_64 0.4-4 6.00 37.00 43.00 OK

Check Details

Version: 0.4-4
Check: R code for possible problems
Result: NOTE
    DrawChromatogram: no visible binding for global variable ‘start’
    DrawChromatogram: no visible global function definition for ‘plot’
    DrawChromatogram: no visible global function definition for ‘polygon’
    ExchangeableAmides: no visible global function definition for ‘na.omit’
    PeptideSpectrum: no visible global function definition for ‘plot’
    PeptideSpectrum: no visible global function definition for ‘axis’
    PeptideSpectrum: no visible global function definition for ‘lines’
    PeptideSpectrum: no visible global function definition for ‘text’
    PeptideSpectrum: no visible global function definition for
     ‘plot.window’
    ReadMspDirectory : ReadMSP: no visible global function definition for
     ‘read.table’
    ReadMspFile: no visible global function definition for ‘read.table’
    SpectrumSimilarity: no visible global function definition for
     ‘plot.new’
    SpectrumSimilarity: no visible global function definition for
     ‘plot.window’
    SpectrumSimilarity: no visible global function definition for ‘lines’
    SpectrumSimilarity: no visible global function definition for ‘axis’
    SpectrumSimilarity: no visible global function definition for ‘rect’
    SpectrumSimilarity: no visible global function definition for ‘mtext’
    SpectrumSimilarity: no visible global function definition for ‘text’
    WriteMspFile: no visible global function definition for ‘na.omit’
    Undefined global functions or variables:
     axis lines mtext na.omit plot plot.new plot.window polygon read.table
     rect start text
    Consider adding
     importFrom("graphics", "axis", "lines", "mtext", "plot", "plot.new",
     "plot.window", "polygon", "rect", "text")
     importFrom("stats", "na.omit", "start")
     importFrom("utils", "read.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64