CRAN Package Check Results for Package PAS

Last updated on 2015-08-03 11:49:21.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2 2.59 35.45 38.04 NOTE
r-devel-linux-x86_64-debian-gcc 1.2 2.58 34.72 37.31 NOTE
r-devel-linux-x86_64-fedora-clang 1.2 79.94 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2 75.00 NOTE
r-devel-osx-x86_64-clang 1.2 67.51 NOTE
r-devel-windows-ix86+x86_64 1.2 7.00 57.00 64.00 NOTE
r-patched-linux-x86_64 1.2 2.54 35.36 37.90 NOTE
r-patched-solaris-sparc 1.2 485.00 NOTE
r-patched-solaris-x86 1.2 105.90 NOTE
r-release-linux-x86_64 1.2 2.59 36.35 38.94 NOTE
r-release-osx-x86_64-mavericks 1.2 NOTE
r-release-windows-ix86+x86_64 1.2 9.00 64.00 73.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2 11.00 102.00 113.00 NOTE

Check Details

Version: 1.2
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.2
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘doc’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.2
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘glmnet’ which was already attached by Depends.
     Please remove these calls from your code.
    Package in Depends field not imported from: ‘glmnet’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.2
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.binmod predict.binmod print.binmod
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cv_nfold: no visible global function definition for ‘predict’
    cv_nfold: no visible global function definition for ‘cv.glmnet’
    cv_nfold: no visible global function definition for ‘coef’
    cv_nfold: no visible global function definition for ‘var’
    getoptbinsize: no visible global function definition for ‘var’
    getoptbinsize: no visible global function definition for ‘cor’
    glmcvbeta: no visible global function definition for ‘cv.glmnet’
    myhistplot: no visible global function definition for ‘par’
    myhistplot: no visible global function definition for ‘plot’
    myhistplot: no visible global function definition for ‘axis’
    plot.binmod: no visible global function definition for ‘par’
    plot.binmod: no visible global function definition for ‘layout’
    plot.binmod: no visible global function definition for ‘dev.off’
    plot.binmod: no visible binding for global variable ‘plot.new’
    plot.binmod: no visible global function definition for ‘postscript’
    plot.binmod: no visible global function definition for ‘plot’
    plot.binmod: no visible global function definition for ‘mtext’
    plot.binmod: no visible global function definition for ‘legend’
    plot.binmod: no visible global function definition for ‘arrows’
    predict.binmod: no visible global function definition for ‘predict’
    singlemarkanalysis: no visible global function definition for ‘glm’
    singlemarkanalysis: no visible global function definition for ‘var’
    weightedx: no visible global function definition for ‘na.exclude’
    Undefined global functions or variables:
     arrows axis coef cor cv.glmnet dev.off glm layout legend mtext
     na.exclude par plot plot.new postscript predict var
    Consider adding
     importFrom("grDevices", "dev.off", "postscript")
     importFrom("graphics", "arrows", "axis", "layout", "legend", "mtext",
     "par", "plot", "plot.new")
     importFrom("stats", "coef", "cor", "glm", "na.exclude", "predict",
     "var")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cv_nfold: no visible global function definition for ‘cv.glmnet’
    glmcvbeta: no visible global function definition for ‘cv.glmnet’
    Undefined global functions or variables:
     cv.glmnet
Flavor: r-devel-osx-x86_64-clang

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cv_nfold: no visible global function definition for ‘cv.glmnet’
    glmcvbeta: no visible global function definition for ‘cv.glmnet’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64