CRAN Package Check Results for Package PAS

Last updated on 2015-07-02 23:47:25.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2 2.56 36.33 38.89 NOTE
r-devel-linux-x86_64-debian-gcc 1.2 2.53 35.26 37.79 NOTE
r-devel-linux-x86_64-fedora-clang 1.2 78.21 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2 75.17 NOTE
r-devel-osx-x86_64-clang 1.2 65.30 NOTE
r-devel-windows-ix86+x86_64 1.2 7.00 50.00 57.00 NOTE
r-patched-linux-x86_64 1.2 2.50 35.62 38.11 NOTE
r-patched-solaris-sparc 1.2 486.50 NOTE
r-patched-solaris-x86 1.2 107.50 NOTE
r-release-linux-x86_64 1.2 2.62 35.84 38.46 NOTE
r-release-osx-x86_64-mavericks 1.2 NOTE
r-release-windows-ix86+x86_64 1.2 7.00 55.00 62.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2 12.00 65.00 77.00 NOTE

Check Details

Version: 1.2
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.2
Check: top-level files
Result: NOTE
    Non-standard file/directory found at top level:
     ‘doc’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.2
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘glmnet’ which was already attached by Depends.
     Please remove these calls from your code.
    Package in Depends field not imported from: ‘glmnet’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.2
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.binmod predict.binmod print.binmod
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cv_nfold: no visible global function definition for ‘predict’
    cv_nfold: no visible global function definition for ‘cv.glmnet’
    cv_nfold: no visible global function definition for ‘coef’
    cv_nfold: no visible global function definition for ‘var’
    getoptbinsize: no visible global function definition for ‘var’
    getoptbinsize: no visible global function definition for ‘cor’
    glmcvbeta: no visible global function definition for ‘cv.glmnet’
    myhistplot: no visible global function definition for ‘par’
    myhistplot: no visible global function definition for ‘plot’
    myhistplot: no visible global function definition for ‘axis’
    plot.binmod: no visible global function definition for ‘par’
    plot.binmod: no visible global function definition for ‘layout’
    plot.binmod: no visible global function definition for ‘dev.off’
    plot.binmod: no visible binding for global variable ‘plot.new’
    plot.binmod: no visible global function definition for ‘postscript’
    plot.binmod: no visible global function definition for ‘plot’
    plot.binmod: no visible global function definition for ‘mtext’
    plot.binmod: no visible global function definition for ‘legend’
    plot.binmod: no visible global function definition for ‘arrows’
    predict.binmod: no visible global function definition for ‘predict’
    singlemarkanalysis: no visible global function definition for ‘glm’
    singlemarkanalysis: no visible global function definition for ‘var’
    weightedx: no visible global function definition for ‘na.exclude’
    Undefined global functions or variables:
     arrows axis coef cor cv.glmnet dev.off glm layout legend mtext
     na.exclude par plot plot.new postscript predict var
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cv_nfold: no visible global function definition for ‘predict’
    cv_nfold: no visible global function definition for ‘cv.glmnet’
    cv_nfold: no visible global function definition for ‘coef’
    cv_nfold: no visible global function definition for ‘var’
    getoptbinsize: no visible global function definition for ‘var’
    getoptbinsize: no visible global function definition for ‘cor’
    glmcvbeta: no visible global function definition for ‘cv.glmnet’
    myhistplot: no visible global function definition for ‘par’
    myhistplot: no visible global function definition for ‘plot’
    myhistplot: no visible global function definition for ‘axis’
    plot.binmod: no visible global function definition for ‘par’
    plot.binmod: no visible global function definition for ‘layout’
    plot.binmod: no visible global function definition for ‘dev.off’
    plot.binmod: no visible binding for global variable ‘plot.new’
    plot.binmod: no visible global function definition for ‘postscript’
    plot.binmod: no visible global function definition for ‘plot’
    plot.binmod: no visible global function definition for ‘mtext’
    plot.binmod: no visible global function definition for ‘legend’
    plot.binmod: no visible global function definition for ‘arrows’
    predict.binmod: no visible global function definition for ‘predict’
    singlemarkanalysis: no visible global function definition for ‘glm’
    singlemarkanalysis: no visible global function definition for ‘var’
    weightedx: no visible global function definition for ‘na.exclude’
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cv_nfold: no visible global function definition for ‘cv.glmnet’
    glmcvbeta: no visible global function definition for ‘cv.glmnet’
    Undefined global functions or variables:
     cv.glmnet
Flavor: r-devel-osx-x86_64-clang

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cv_nfold: no visible global function definition for ‘cv.glmnet’
    glmcvbeta: no visible global function definition for ‘cv.glmnet’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64