CRAN Package Check Results for Package PF

Last updated on 2015-07-02 06:48:20.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 9.5 1.52 37.50 39.02 ERROR
r-devel-linux-x86_64-debian-gcc 9.5 1.77 36.83 38.60 ERROR
r-devel-linux-x86_64-fedora-clang 9.5 77.62 ERROR
r-devel-linux-x86_64-fedora-gcc 9.5 73.42 ERROR
r-devel-osx-x86_64-clang 9.5 72.32 ERROR
r-devel-windows-ix86+x86_64 9.5 5.00 55.00 60.00 ERROR
r-patched-linux-x86_64 9.5 1.74 37.52 39.26 NOTE
r-patched-solaris-sparc 9.5 474.40 NOTE
r-patched-solaris-x86 9.5 88.50 NOTE
r-release-linux-x86_64 9.5 1.62 37.97 39.59 NOTE
r-release-osx-x86_64-mavericks 9.5 NOTE
r-release-windows-ix86+x86_64 9.5 5.00 64.00 69.00 NOTE
r-oldrel-windows-ix86+x86_64 9.5 8.00 72.00 80.00 NOTE

Check Details

Version: 9.5
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Title field: should not end in a period.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 9.5
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘RColorBrewer’ ‘gdata’ ‘grid’ ‘methods’ ‘xtable’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 9.5
Check: R code for possible problems
Result: NOTE
    .matricize: no visible global function definition for ‘terms’
    .matricize: no visible global function definition for ‘model.frame’
    .rr.score.asymp: no visible global function definition for ‘qnorm’
    .twoby: no visible global function definition for ‘terms’
    .twoby: no visible global function definition for ‘model.frame’
    IDRlsi: no visible global function definition for ‘qchisq’
    IDRlsi: no visible global function definition for ‘pchisq’
    IDRsc: no visible global function definition for ‘qnorm’
    RRlsi: no visible global function definition for ‘qchisq’
    RRlsi: no visible global function definition for ‘pchisq’
    RRmh: no visible global function definition for ‘qnorm’
    RRmpWald: no visible global function definition for ‘qt’
    RRmpWald: no visible global function definition for ‘qnorm’
    RRor: no visible global function definition for ‘coef’
    RRor: no visible global function definition for ‘qnorm’
    RRor: no visible global function definition for ‘qt’
    RRotsst : binci: no visible global function definition for ‘qbeta’
    RRsc: no visible global function definition for ‘qnorm’
    RRstr: no visible global function definition for ‘qnorm’
    RRstr: no visible global function definition for ‘pchisq’
    RRtosst : binci: no visible global function definition for ‘qbeta’
    pf: no visible global function definition for ‘new’
    phiWt: no visible global function definition for ‘update’
    phiWt: no visible global function definition for ‘glm’
    rr1: no visible global function definition for ‘new’
    rrmp: no visible global function definition for ‘new’
    rror: no visible global function definition for ‘new’
    rrsc: no visible global function definition for ‘new’
    rrsi: no visible global function definition for ‘new’
    rrstr: no visible global function definition for ‘new’
    rsbWt: no visible global function definition for ‘update’
    tauWt : Tau: no visible global function definition for ‘resid’
    tauWt : tauOptim: no visible global function definition for ‘resid’
    tauWt : tauOptim: no visible global function definition for ‘update’
    tauWt: no visible global function definition for ‘update’
    tauWt: no visible global function definition for ‘glm’
    tauWt: Error while checking: invalid ‘envir’ argument
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 9.5
Check: examples
Result: ERROR
    Running examples in ‘PF-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: RRmpWald
    > ### Title: Wald confidence intervals for RR from matched pairs
    > ### Aliases: RRmpWald
    >
    > ### ** Examples
    >
    > RRmpWald(pos ~ tx + cluster(cage), New, compare = c('con', 'vac'))
    Error in `[.data.frame`(tbl, , compare[2]) : undefined columns selected
    Calls: RRmpWald -> .twoby -> table -> [ -> [.data.frame
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64