CRAN Package Check Results for Package PKgraph

Last updated on 2014-10-02 11:48:13.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.7 4.40 66.04 70.44 NOTE
r-devel-linux-x86_64-debian-gcc 1.7 4.52 65.84 70.36 NOTE
r-devel-linux-x86_64-fedora-clang 1.7 162.97 NOTE
r-devel-linux-x86_64-fedora-gcc 1.7 171.32 NOTE
r-devel-osx-x86_64-clang 1.7 129.29 NOTE
r-devel-windows-ix86+x86_64 1.7 17.00 99.00 116.00 NOTE
r-patched-linux-x86_64 1.7 4.87 69.98 74.85 NOTE
r-release-linux-ix86 1.7 6.76 94.42 101.18 NOTE
r-release-linux-x86_64 1.7 5.22 74.42 79.64 NOTE
r-release-osx-x86_64-mavericks 1.7 ERROR
r-release-osx-x86_64-snowleopard 1.7 ERROR
r-release-windows-ix86+x86_64 1.7 18.00 112.00 130.00 NOTE
r-oldrel-windows-ix86+x86_64 1.7 20.00 108.00 128.00 NOTE

Check Details

Version: 1.7
Check: package dependencies
Result: NOTE
    Depends: includes the non-default packages:
     ‘RGtk2’ ‘gWidgetsRGtk2’ ‘cairoDevice’ ‘lattice’ ‘rggobi’ ‘ggplot2’
     ‘proto’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 1.7
Check: DESCRIPTION meta-information
Result: NOTE
    Packages listed in more than one of Depends, Imports, Suggests, Enhances:
     ‘RGtk2’ ‘gWidgetsRGtk2’
    A package should be listed in only one of these fields.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.7
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘cairoDevice’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.7
Check: R code for possible problems
Result: NOTE
    ErrorMessage: no visible global function definition for ‘gmessage’
    PKgraph: no visible global function definition for ‘gwindow’
    PKgraph: no visible global function definition for ‘gmenu’
    PKgraph: no visible global function definition for ‘gtoolbar’
    PKgraph: no visible global function definition for ‘ggroup’
    PKgraph: no visible global function definition for ‘gnotebook’
    PKgraph: no visible global function definition for ‘gpanedgroup’
    PKgraph: no visible global function definition for ‘glabel’
    PKgraph: no visible global function definition for ‘gtable’
    PKgraph: no visible global function definition for ‘gstatusbar’
    checkforPKModel: no visible global function definition for ‘gmessage’
    cleanFigureButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.hist.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    com.hist.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.hist.okButtonHandler.0125: no visible global function definition
     for ‘ggraphics’
    com.hist.okButtonHandler.0125: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.map.okButtonHandler: no visible global function definition for
     ‘gtable’
    com.scatter.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    com.scatter.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.scatter.okButtonHandler.0125: no visible global function definition
     for ‘ggraphics’
    com.scatter.okButtonHandler.0125: no visible binding for global
     variable ‘pk.dialog.notebook’
    com.time.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.time.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    com.time.okButtonHandler.back: no visible global function definition
     for ‘ggraphics’
    com.time.okButtonHandler.back: no visible binding for global variable
     ‘pk.dialog.notebook’
    compare.pred.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    configDataHandler: no visible global function definition for ‘gmessage’
    configDirHandler: no visible global function definition for ‘gfile’
    configFigureHandler: no visible global function definition for
     ‘gwindow’
    configFigureHandler: no visible global function definition for ‘ggroup’
    configFigureHandler: no visible global function definition for ‘gframe’
    configFigureHandler: no visible global function definition for
     ‘glayout’
    configFigureHandler: no visible global function definition for ‘glabel’
    configFigureHandler: no visible global function definition for ‘gedit’
    configFigureHandler: no visible global function definition for
     ‘gcheckboxgroup’
    configFigureHandler: no visible global function definition for
     ‘gbutton’
    configFormatHandler: no visible global function definition for
     ‘gwindow’
    configFormatHandler: no visible global function definition for ‘ggroup’
    configFormatHandler: no visible global function definition for ‘gframe’
    configFormatHandler: no visible global function definition for
     ‘glayout’
    configFormatHandler: no visible global function definition for ‘glabel’
    configFormatHandler: no visible global function definition for
     ‘gcheckboxgroup’
    configFormatHandler: no visible global function definition for ‘gedit’
    configFormatHandler: no visible global function definition for
     ‘gbutton’
    ggobi.diagose: no visible global function definition for ‘gwindow’
    ggobi.diagose: no visible global function definition for ‘ggroup’
    ggobi.diagose: no visible global function definition for ‘glabel’
    ggobi.diagose: no visible global function definition for ‘gframe’
    ggobi.diagose: no visible global function definition for ‘glayout’
    ggobi.diagose: no visible global function definition for ‘gdroplist’
    ggobi.diagose: no visible global function definition for ‘gbutton’
    ggobi.diagose: no visible global function definition for ‘gtable’
    ggobi.diagose: no visible global function definition for ‘gpanedgroup’
    ggobi.map: no visible global function definition for ‘gwindow’
    ggobi.map: no visible global function definition for ‘ggroup’
    ggobi.map: no visible global function definition for ‘gframe’
    ggobi.map: no visible global function definition for ‘glayout’
    ggobi.map: no visible global function definition for ‘gdroplist’
    ggobi.map: no visible global function definition for ‘gbutton’
    ggobiPlotType: no visible global function definition for ‘gwindow’
    ggobiPlotType: no visible global function definition for ‘ggroup’
    ggobiPlotType: no visible global function definition for ‘gframe’
    ggobiPlotType: no visible global function definition for ‘glayout’
    ggobiPlotType: no visible global function definition for ‘gdroplist’
    ggobiPlotType: no visible global function definition for ‘gbutton’
    model.cov.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    model.cov.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.gof.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    model.gof.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.ind.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    model.ind.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.para.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    model.para.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.random.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    model.random.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.resid.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    model.resid.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.struct.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    model.struct.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    openDataHandler: no visible global function definition for ‘gwindow’
    openDataHandler: no visible global function definition for ‘ggroup’
    openDataHandler: no visible global function definition for ‘gframe’
    openDataHandler: no visible global function definition for ‘glayout’
    openDataHandler: no visible global function definition for ‘glabel’
    openDataHandler: no visible global function definition for ‘gdroplist’
    openDataHandler: no visible global function definition for ‘gbutton’
    openDataHandler : <anonymous>: no visible global function definition
     for ‘gtable’
    openDataHandler : <anonymous>: no visible global function definition
     for ‘gfile’
    openDataHandler : <anonymous> : <anonymous>: no visible binding for
     '<<-' assignment to ‘test’
    openDataHandler : <anonymous> : <anonymous>: no visible binding for
     global variable ‘test’
    openDataHandler : <anonymous> : <anonymous>: no visible global function
     definition for ‘gtable’
    pk.boot.sum: no visible global function definition for ‘gmessage’
    pk.boot.vis: no visible global function definition for ‘gmessage’
    pk.factor: no visible global function definition for ‘gmessage’
    pk.heat.menu: no visible global function definition for ‘gmessage’
    pk.matrix.menu: no visible global function definition for ‘gmessage’
    pk.model.cov: no visible global function definition for ‘gmessage’
    pk.model.gof: no visible global function definition for ‘gmessage’
    pk.model.ind: no visible global function definition for ‘gmessage’
    pk.model.para: no visible global function definition for ‘gmessage’
    pk.model.random: no visible global function definition for ‘gmessage’
    pk.model.resid: no visible global function definition for ‘gmessage’
    pk.model.struct: no visible global function definition for ‘gmessage’
    pk.outlier.psn: no visible global function definition for ‘gmessage’
    pk.outlier.vis: no visible global function definition for ‘gmessage’
    pk.para.menu: no visible global function definition for ‘gmessage’
    pk.sim: no visible global function definition for ‘gmessage’
    pk.time.menu: no visible global function definition for ‘gmessage’
    pk.tri.menu: no visible global function definition for ‘gmessage’
    project.restore: no visible global function definition for ‘gfile’
    project.restore : <anonymous> : <anonymous>: no visible global function
     definition for ‘gtable’
    psn.bootstrap: no visible binding for global variable
     ‘minimization.successful’
    psn.bootstrap: no visible binding for global variable
     ‘covariance.step.successful’
    psn.bootstrap: no visible binding for global variable
     ‘covariance.step.warnings’
    psn.bootstrap: no visible binding for global variable
     ‘estimate.near.boundary’
    psn.bootstrap: no visible global function definition for ‘ggraphics’
    psn.bootstrap: no visible binding for global variable
     ‘pk.dialog.notebook’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘pk.dialog.notebook’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘minimization.successful’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘covariance.step.successful’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘covariance.step.warnings’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘estimate.near.boundary’
    psn.bootstrap.sum.okButtonHandler: no visible global function
     definition for ‘ggraphics’
    psn.bootstrap.vis.okButtonHandler: no visible global function
     definition for ‘gwindow’
    psn.bootstrap.vis.okButtonHandler: no visible global function
     definition for ‘ggroup’
    psn.bootstrap.vis.okButtonHandler: no visible global function
     definition for ‘ggraphics’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘pk.dialog.notebook’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘ID’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘resampleID’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘para’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘VAR’
    psn.cdd: no visible binding for global variable
     ‘minimization.successful’
    psn.cdd: no visible binding for global variable
     ‘covariance.step.successful’
    psn.cdd: no visible binding for global variable
     ‘covariance.step.warnings’
    psn.cdd: no visible binding for global variable
     ‘estimate.near.boundary’
    psn.cdd: no visible binding for global variable ‘outside.n.sd’
    psn.outlier.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    psn.outlier.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    psn.outlier.okButtonHandler: no visible binding for global variable
     ‘ID’
    psn.outlier.okButtonHandler: no visible binding for global variable
     ‘cook.scores’
    psn.outlier.okButtonHandler: no visible binding for global variable
     ‘cov.ratios’
    restoreHandler: no visible global function definition for ‘gfile’
    restoreHandler : <anonymous> : <anonymous>: no visible global function
     definition for ‘gtable’
    saveHandler: no visible global function definition for ‘gfile’
    saveImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    saveImageHandler: no visible global function definition for ‘gfile’
    saveImageHandler.matrix: no visible binding for global variable
     ‘pk.dialog.notebook’
    saveImageHandler.matrix: no visible global function definition for
     ‘gfile’
    saveImageHandler.pkmodel: no visible binding for global variable
     ‘pk.dialog.notebook’
    saveImageHandler.pkmodel: no visible global function definition for
     ‘gfile’
    saveProjectHandler: no visible global function definition for ‘gfile’
    selectDataDialog: no visible global function definition for ‘gmessage’
    selectDataDialog: no visible global function definition for ‘gwindow’
    selectDataDialog: no visible global function definition for ‘ggroup’
    selectDataDialog: no visible global function definition for ‘glabel’
    selectDataDialog: no visible global function definition for ‘gframe’
    selectDataDialog: no visible global function definition for ‘gtable’
    selectDataDialog: no visible global function definition for ‘gbutton’
    selectDataDialog: no visible global function definition for
     ‘addHandlerClicked’
    setHandler: no visible global function definition for ‘gfile’
    subset.okButtonHandler: no visible global function definition for
     ‘gwindow’
    subset.okButtonHandler: no visible global function definition for
     ‘gframe’
    subset.okButtonHandler: no visible global function definition for
     ‘glayout’
    subset.okButtonHandler: no visible global function definition for
     ‘gdroplist’
    subset.okButtonHandler: no visible global function definition for
     ‘gedit’
    subset.okButtonHandler: no visible global function definition for
     ‘gbutton’
    subset.okButtonHandler : <anonymous>: no visible global function
     definition for ‘gtable’
    summary.bi.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.bi.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    summary.bi.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.heat.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    summary.heat.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.matrix.ggobiImageHandler: no visible binding for global
     variable ‘pk.dialog.notebook’
    summary.matrix.okButtonHandler: no visible global function definition
     for ‘ggraphics’
    summary.matrix.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.para.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.para.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    summary.para.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.tri.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    summary.tri.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.uni.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.uni.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    summary.uni.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    translateList: no visible global function definition for ‘gmessage’
    val.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    val.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    validation.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘gwindow’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘ggroup’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘ggraphics’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘runID’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘deleteID’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘ID’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘para’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘resampleID’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘namerows’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘melt’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘ddply’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘variable’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘rescaler’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘value’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘rng’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘cor1’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘cor2’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.7
Check: Rd files
Result: NOTE
    prepare_Rd: PKgraph.Rd:11-13: Dropping empty section \arguments
    prepare_Rd: PKgraph.Rd:17-19: Dropping empty section \examples
    prepare_Rd: pkdata.Rd:9-11: Dropping empty section \format
    prepare_Rd: pkdata.Rd:14-16: Dropping empty section \examples
    prepare_Rd: pkdata2.Rd:9-11: Dropping empty section \format
    prepare_Rd: pkdata2.Rd:14-16: Dropping empty section \examples
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.7
Check: R code for possible problems
Result: NOTE
    PKgraph: warning in ggroup(horizontal = FALSE, spacing = 0, cont = PKW,
     expand = TRUE): partial argument match of ‘cont’ to ‘container’
    configFigureHandler: warning in ggroup(cont = gfigconfig.win,
     horizontal = FALSE): partial argument match of ‘cont’ to ‘container’
    configFigureHandler: warning in glayout(cont = gf1): partial argument
     match of ‘cont’ to ‘container’
    configFormatHandler: warning in ggroup(cont = gconfigsave.win,
     horizontal = FALSE): partial argument match of ‘cont’ to ‘container’
    configFormatHandler: warning in glayout(cont = gf1): partial argument
     match of ‘cont’ to ‘container’
    ggobi.diagose: warning in glabel("Step 1: Map data", cont = g1):
     partial argument match of ‘cont’ to ‘container’
    ggobi.diagose: warning in gframe(horizontal = FALSE, expand = FALSE,
     cont = g1): partial argument match of ‘cont’ to ‘container’
    ggobi.diagose: warning in glayout(cont = gf): partial argument match of
     ‘cont’ to ‘container’
    ggobi.diagose: warning in ggroup(cont = g1): partial argument match of
     ‘cont’ to ‘container’
    ggobi.diagose: warning in gbutton("Map Data", cont = bg1, handler =
     NULL): partial argument match of ‘cont’ to ‘container’
    ggobi.diagose: warning in gbutton("Remove selection", cont = bg1,
     handler = NULL): partial argument match of ‘cont’ to ‘container’
    ggobi.diagose: warning in glabel("Step 2: Configure plots", cont = g2):
     partial argument match of ‘cont’ to ‘container’
    ggobi.diagose: warning in ggroup(horizontal = FALSE, expand = FALSE,
     cont = g2): partial argument match of ‘cont’ to ‘container’
    ggobi.diagose: warning in gtable(items = c(letters[1:24]), cont = g22,
     expand = TRUE): partial argument match of ‘cont’ to ‘container’
    ggobi.diagose: warning in ggroup(cont = g2): partial argument match of
     ‘cont’ to ‘container’
    ggobi.diagose: warning in gbutton("Plot selection", cont = bg2, handler
     = NULL): partial argument match of ‘cont’ to ‘container’
    ggobi.diagose: warning in gbutton("Plot all", cont = bg2, handler =
     NULL): partial argument match of ‘cont’ to ‘container’
    ggobi.diagose: warning in gbutton("Close plots", cont = bg2, handler =
     NULL): partial argument match of ‘cont’ to ‘container’
    ggobi.map: warning in ggroup(cont = ggobi.map, horizontal = FALSE):
     partial argument match of ‘cont’ to ‘container’
    ggobi.map: warning in glayout(cont = gf1): partial argument match of
     ‘cont’ to ‘container’
    ggobiPlotType: warning in ggroup(cont = ggobi.map, horizontal = FALSE):
     partial argument match of ‘cont’ to ‘container’
    ggobiPlotType: warning in glayout(cont = gf1): partial argument match
     of ‘cont’ to ‘container’
    openDataHandler: warning in ggroup(cont = gtmp.win, horizontal =
     FALSE): partial argument match of ‘cont’ to ‘container’
    openDataHandler: warning in glayout(cont = gf1): partial argument match
     of ‘cont’ to ‘container’
    selectDataDialog: warning in ggroup(cont = ggobi.gwin, horizontal =
     FALSE): partial argument match of ‘cont’ to ‘container’
    selectDataDialog: warning in glabel(text = labelMessage1, cont =
     ggobi.group): partial argument match of ‘cont’ to ‘container’
    selectDataDialog: warning in gframe(cont = ggobi.group): partial
     argument match of ‘cont’ to ‘container’
    selectDataDialog: warning in gtable(alldata.name, cont = g1, expand =
     TRUE): partial argument match of ‘cont’ to ‘container’
    selectDataDialog: warning in gbutton(">", cont = g1): partial argument
     match of ‘cont’ to ‘container’
    selectDataDialog: warning in gtable(colnames(Theoph), cont = g1, expand
     = TRUE): partial argument match of ‘cont’ to ‘container’
    selectDataDialog: warning in glabel(text = labelMessage2, cont =
     ggobi.group): partial argument match of ‘cont’ to ‘container’
    selectDataDialog: warning in gbutton("Go to next step", cont =
     ggobi.group): partial argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in glayout(cont = gframe.subset):
     partial argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in gbutton(text = "Subset", border =
     TRUE, cont = gframe.subset, handler = function(h, ...) {: partial
     argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in sapply(1:length(subset.var),
     function(i) {: partial argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in currentData <<-
     subset.f1(svalue(tbl.value[[i * 3 - 2]]), svalue(tbl.value[[i * 3 -
     1]]), svalue(tbl.value[[i * 3]]), currentData): partial argument
     match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in }): partial argument match of ‘cont’
     to ‘container’
    subset.okButtonHandler: warning in thisDatano <- getTotalDataLen() + 1:
     partial argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in datatype <- "Subset": partial
     argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in thisDataName <-
     paste(getTotalDataLen() + 1, "_", datatype, sep = ""): partial
     argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in setDatasets(currentData,
     thisDatano): partial argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in setCurrentDataType(datatype,
     thisDataName): partial argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in ptable = gtable(currentData,
     multiple = TRUE, expand = TRUE): partial argument match of ‘cont’ to
     ‘container’
    subset.okButtonHandler: warning in pkmain.add(ptable,
     as.character(thisDataName), override.closebutton = TRUE): partial
     argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in dispose(gwin.subset): partial
     argument match of ‘cont’ to ‘container’
    subset.okButtonHandler: warning in svalue(PKENV$pmg.statusBar) <-
     "Subset sucessfully!": partial argument match of ‘cont’ to
     ‘container’
    subset.okButtonHandler: warning in }): partial argument match of ‘cont’
     to ‘container’
    cleanFigureButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.hist.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.hist.okButtonHandler.0125: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.scatter.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.scatter.okButtonHandler.0125: no visible binding for global
     variable ‘pk.dialog.notebook’
    com.time.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    com.time.okButtonHandler.back: no visible binding for global variable
     ‘pk.dialog.notebook’
    compare.pred.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.cov.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.gof.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.ind.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.para.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.random.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.resid.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    model.struct.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    openDataHandler : <anonymous> : <anonymous>: no visible binding for
     '<<-' assignment to ‘test’
    openDataHandler : <anonymous> : <anonymous>: no visible binding for
     global variable ‘test’
    psn.bootstrap: no visible binding for global variable
     ‘minimization.successful’
    psn.bootstrap: no visible binding for global variable
     ‘covariance.step.successful’
    psn.bootstrap: no visible binding for global variable
     ‘covariance.step.warnings’
    psn.bootstrap: no visible binding for global variable
     ‘estimate.near.boundary’
    psn.bootstrap: no visible binding for global variable
     ‘pk.dialog.notebook’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘pk.dialog.notebook’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘minimization.successful’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘covariance.step.successful’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘covariance.step.warnings’
    psn.bootstrap.sum.okButtonHandler: no visible binding for global
     variable ‘estimate.near.boundary’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘pk.dialog.notebook’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘ID’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘resampleID’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘para’
    psn.bootstrap.vis.okButtonHandler: no visible binding for global
     variable ‘VAR’
    psn.cdd: no visible binding for global variable
     ‘minimization.successful’
    psn.cdd: no visible binding for global variable
     ‘covariance.step.successful’
    psn.cdd: no visible binding for global variable
     ‘covariance.step.warnings’
    psn.cdd: no visible binding for global variable
     ‘estimate.near.boundary’
    psn.cdd: no visible binding for global variable ‘outside.n.sd’
    psn.outlier.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    psn.outlier.okButtonHandler: no visible binding for global variable
     ‘ID’
    psn.outlier.okButtonHandler: no visible binding for global variable
     ‘cook.scores’
    psn.outlier.okButtonHandler: no visible binding for global variable
     ‘cov.ratios’
    saveImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    saveImageHandler.matrix: no visible binding for global variable
     ‘pk.dialog.notebook’
    saveImageHandler.pkmodel: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.bi.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.bi.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.heat.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.matrix.ggobiImageHandler: no visible binding for global
     variable ‘pk.dialog.notebook’
    summary.matrix.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.para.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.para.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.tri.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.uni.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    summary.uni.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    val.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    validation.ggobiImageHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘pk.dialog.notebook’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘runID’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘deleteID’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘ID’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘para’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘resampleID’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘namerows’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘melt’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘ddply’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘variable’
    vis.outlier.okButtonHandler: no visible global function definition for
     ‘rescaler’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘value’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘rng’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘cor1’
    vis.outlier.okButtonHandler: no visible binding for global variable
     ‘cor2’
Flavors: r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.7
Check: package dependencies
Result: ERROR
    Packages required but not available:
     ‘RGtk2’ ‘gWidgetsRGtk2’ ‘cairoDevice’ ‘rggobi’
    
    Depends: includes the non-default packages:
     ‘RGtk2’ ‘gWidgetsRGtk2’ ‘cairoDevice’ ‘lattice’ ‘rggobi’ ‘ggplot2’
     ‘proto’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-release-osx-x86_64-mavericks

Version: 1.7
Check: package dependencies
Result: ERROR
    Package required but not available: ‘rggobi’
    
    Depends: includes the non-default packages:
     ‘RGtk2’ ‘gWidgetsRGtk2’ ‘cairoDevice’ ‘lattice’ ‘rggobi’ ‘ggplot2’
     ‘proto’
    Adding so many packages to the search path is excessive and importing
    selectively is preferable.
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-release-osx-x86_64-snowleopard