CRAN Package Check Results for Package PamGeneMixed

Last updated on 2014-08-01 05:48:29.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.03 5.96 57.56 63.52 NOTE
r-devel-linux-x86_64-debian-gcc 1.03 4.89 56.62 61.50 NOTE
r-devel-linux-x86_64-fedora-clang 1.03 153.94 NOTE
r-devel-linux-x86_64-fedora-gcc 1.03 147.54 NOTE
r-devel-osx-x86_64-clang 1.03 120.34 NOTE
r-devel-windows-ix86+x86_64 1.03 16.00 81.00 97.00 NOTE
r-patched-linux-x86_64 1.03 4.85 56.85 61.70 NOTE
r-patched-solaris-sparc 1.03 803.80 NOTE
r-patched-solaris-x86 1.03 193.10 NOTE
r-release-linux-ix86 1.03 5.92 68.20 74.12 NOTE
r-release-linux-x86_64 1.03 5.17 57.16 62.33 NOTE
r-release-osx-x86_64-mavericks 1.03 NOTE
r-release-osx-x86_64-snowleopard 1.03 NOTE
r-release-windows-ix86+x86_64 1.03 20.00 117.00 137.00 NOTE
r-oldrel-windows-ix86+x86_64 1.03 21.00 184.00 205.00 NOTE

Check Details

Version: 1.03
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     mgcv nlme
     Please remove these calls from your code.
    Packages in Depends field not imported from:
     gplots mgcv nlme
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter Creating R
    packages of the Writing R Extensions manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.03
Check: for old-style vignette sources
Result: NOTE
    Vignette sources only in inst/doc :
     PamGeneMixed.Rnw
    A vignettes directory is required as from R 3.1.0
    and these will not be indexed nor checked
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64

Version: 1.03
Check: Rd line widths
Result: NOTE
    Rd file 'AutoPamGeneMix.Rd':
     \examples lines wider than 100 characters:
     # Testing the group specific velocities at t=0,t=end, t=30, and for entire profile.
    
    Rd file 'PamGeneMix.Rd':
     \examples lines wider than 100 characters:
     M3gamm<-PamGeneMix(formula=y~-1+ResTrt+s(time,by=ResTrt,bs="tp",m=3),Weights=varIdent(form=~1|ResTrt) ,
     M4gamm<-PamGeneMix(formula=y~-1+ResState*TreatName+s(time,by=ResTrt,bs="tp",m=3),Weights=varIdent(form=~1|ResState) ,
    
    Rd file 'testVarCom.Rd':
     \examples lines wider than 100 characters:
     M3gamm<-PamGeneMix(formula=y~-1+ResTrt+s(time,by=ResTrt,bs="tp",m=3),Weights=varIdent(form=~1|ResTrt) ,
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.03
Check: for old-style vignette sources
Result: NOTE
    Vignette sources only in 'inst/doc':
     'PamGeneMixed.Rnw'
    A 'vignettes' directory will be required as from R 3.1.0
Flavor: r-oldrel-windows-ix86+x86_64