CRAN Package Check Results for Package Platypus

Last updated on 2022-01-24 07:49:57 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.2.3 46.17 296.45 342.62 OK
r-devel-linux-x86_64-debian-gcc 3.2.3 44.17 215.21 259.38 OK
r-devel-linux-x86_64-fedora-clang 3.2.3 413.66 NOTE
r-devel-linux-x86_64-fedora-gcc 3.2.3 392.45 NOTE
r-devel-windows-x86_64-new-UL 3.2.3 163.00 330.00 493.00 OK
r-devel-windows-x86_64-new-TK 3.2.3 NOTE
r-patched-linux-x86_64 3.2.3 40.82 281.69 322.51 OK
r-release-linux-x86_64 3.2.3 33.36 279.18 312.54 OK
r-release-macos-arm64 3.2.3 NOTE
r-release-macos-x86_64 3.2.3 NOTE
r-release-windows-ix86+x86_64 3.2.3 80.00 324.00 404.00 OK
r-oldrel-macos-x86_64 3.2.3 NOTE
r-oldrel-windows-ix86+x86_64 3.2.3 80.00 244.00 324.00 ERROR

Additional issues

donttest

Check Details

Version: 3.2.3
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘knitr’ ‘rmarkdown’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-TK, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 3.2.3
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: 'fgsea', 'org.Mm.eg.db'
Flavor: r-release-macos-x86_64

Version: 3.2.3
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘fgsea’
Flavor: r-oldrel-macos-x86_64

Version: 3.2.3
Check: data for non-ASCII characters
Result: WARN
     Error loading dataset 'small_vgm':
     Error in .requirePackage(package) :
     unable to find required package 'SeuratObject'
    
     The dataset(s) may use package(s) not declared in Depends/Imports.
Flavor: r-oldrel-windows-ix86+x86_64

Version: 3.2.3
Check: examples
Result: ERROR
    Running examples in 'Platypus-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: GEX_DEgenes
    > ### Title: Extracts the differentially expressed genes between two groups
    > ### of cells. These groups are defined as cells having either of two
    > ### entries (group1, group2) in the grouping.column of the input Seurat
    > ### object metadata This function uses the FindMarkers function from the
    > ### Seurat package.
    > ### Aliases: GEX_DEgenes
    >
    > ### ** Examples
    >
    > #Basic run between two samples
    > GEX_DEgenes(GEX = Platypus::small_vgm[[2]],min.pct = .25,
    + group1 = "s1",group2 = "s2")
    Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
     namespace 'Matrix' 1.3-2 is already loaded, but >= 1.3.3 is required
    Calls: GEX_DEgenes ... namespaceImportFrom -> asNamespace -> loadNamespace
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64