CRAN Package Check Results for Package PopGenReport

Last updated on 2015-06-30 15:47:18.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1 7.54 117.43 124.96 NOTE
r-devel-linux-x86_64-debian-gcc 2.1 8.29 115.17 123.46 NOTE
r-devel-linux-x86_64-fedora-clang 2.1 259.26 NOTE
r-devel-linux-x86_64-fedora-gcc 2.1 247.18 NOTE
r-devel-osx-x86_64-clang 2.1 219.34 NOTE
r-devel-windows-ix86+x86_64 2.1 20.00 177.00 197.00 NOTE
r-patched-linux-x86_64 2.1 7.32 118.98 126.30 NOTE
r-patched-solaris-sparc 2.1 1157.40 NOTE --no-vignettes
r-patched-solaris-x86 2.1 357.80 NOTE
r-release-linux-x86_64 2.1 7.37 119.96 127.34 NOTE
r-release-osx-x86_64-mavericks 2.1 NOTE
r-release-windows-ix86+x86_64 2.1 27.00 184.00 211.00 NOTE
r-oldrel-windows-ix86+x86_64 2.1 34.00 266.00 300.00 OK

Check Details

Version: 2.1
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 2.1
Check: R code for possible problems
Result: NOTE
    allele.dist: no visible global function definition for
     ‘colorRampPalette’
    allele.dist: no visible global function definition for ‘image’
    allele.dist: no visible global function definition for ‘axis’
    allele.dist: no visible global function definition for ‘box’
    allele.dist: no visible global function definition for ‘text’
    gd.kosman : <anonymous>: no visible global function definition for
     ‘dist’
    gd.smouse: no visible global function definition for ‘as.dist’
    genleastcost: no visible global function definition for ‘dist’
    genleastcost: no visible global function definition for ‘col2rgb’
    genleastcost: no visible global function definition for ‘rgb’
    genleastcost: no visible global function definition for ‘points’
    genleastcost: no visible global function definition for ‘combn’
    genleastcost: no visible global function definition for ‘rainbow’
    genleastcost: no visible global function definition for ‘lines’
    genleastcost: no visible global function definition for ‘as.dist’
    landgenreport: no visible global function definition for
     ‘flush.console’
    lgrMMRR : MMRR: no visible global function definition for ‘lm’
    null.all: no visible binding for global variable ‘median’
    null.all: no visible binding for global variable ‘quantile’
    popgenreport: no visible global function definition for ‘flush.console’
    read.genetable: no visible global function definition for ‘read.csv’
    spautocor: no visible global function definition for ‘as.dist’
    wassermann: no visible global function definition for ‘density’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64

Version: 2.1
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Loading required package: xtable
    Loading required package: adegenet
    Loading required package: ade4
     ==========================
     adegenet 1.4-2 is loaded
     ==========================
    
     - to start, type '?adegenet'
     - to browse adegenet website, type 'adegenetWeb()'
     - to post questions/comments: adegenet-forum@lists.r-forge.r-project.org
    
    
    Loading required package: PopGenReport
    Loading required package: knitr
    Loading required package: raster
    Loading required package: sp
    Quitting from lines 335-350 (PopGenReportIntroduction.rnw)
    Error: processing vignette ‘PopGenReportIntroduction.rnw’ failed with diagnostics:
    missing value where TRUE/FALSE needed
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 2.1
Flags: --no-vignettes
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavor: r-patched-solaris-sparc