CRAN Package Check Results for Package ProfileLikelihood

Last updated on 2015-07-05 03:47:38.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1 0.80 39.49 40.29 NOTE
r-devel-linux-x86_64-debian-gcc 1.1 0.72 38.01 38.73 NOTE
r-devel-linux-x86_64-fedora-clang 1.1 78.24 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1 75.22 NOTE
r-devel-osx-x86_64-clang 1.1 69.17 NOTE
r-devel-windows-ix86+x86_64 1.1 3.00 59.00 62.00 NOTE
r-patched-linux-x86_64 1.1 0.74 41.32 42.06 NOTE
r-patched-solaris-sparc 1.1 467.30 NOTE
r-patched-solaris-x86 1.1 93.30 NOTE
r-release-linux-x86_64 1.1 0.81 39.24 40.05 NOTE
r-release-osx-x86_64-mavericks 1.1 NOTE
r-release-windows-ix86+x86_64 1.1 4.00 59.00 63.00 NOTE
r-oldrel-windows-ix86+x86_64 1.1 4.00 84.00 88.00 NOTE

Check Details

Version: 1.1
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘MASS’ ‘nlme’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1
Check: R code for possible problems
Result: NOTE
    LR.pvalue: warning in matrix(c(y1, y2, (n1 - y1), (n2 - y2)), nr = 2,
     dimnames = list(c("treat", "control"), c("Success", "No success"))):
     partial argument match of ‘nr’ to ‘nrow’
    LR.pvalue: no visible global function definition for ‘glm’
    LR.pvalue: no visible binding for global variable ‘binomial’
    LR.pvalue: no visible global function definition for ‘summary.glm’
    LR.pvalue: no visible global function definition for ‘optimize’
    LR.pvalue: no visible global function definition for ‘pchisq’
    LR.pvalue: no visible global function definition for ‘fisher.test’
    LR.pvalue: no visible global function definition for ‘chisq.test’
    profilelike.glm: no visible binding for global variable ‘gaussian’
    profilelike.glm: no visible global function definition for
     ‘model.frame’
    profilelike.glm: no visible global function definition for
     ‘model.matrix’
    profilelike.glm: no visible global function definition for
     ‘model.response’
    profilelike.glm: no visible global function definition for ‘glm’
    profilelike.glm: no visible binding for global variable ‘na.fail’
    profilelike.glm: no visible global function definition for ‘logLik’
    profilelike.gls: no visible global function definition for
     ‘model.frame’
    profilelike.gls: no visible global function definition for
     ‘model.matrix’
    profilelike.gls: no visible global function definition for
     ‘model.response’
    profilelike.gls: no visible global function definition for ‘lm’
    profilelike.gls: no visible binding for global variable ‘na.fail’
    profilelike.gls: no visible global function definition for ‘gls’
    profilelike.gls: no visible global function definition for ‘logLik’
    profilelike.lm: no visible global function definition for ‘model.frame’
    profilelike.lm: no visible global function definition for
     ‘model.matrix’
    profilelike.lm: no visible global function definition for
     ‘model.response’
    profilelike.lm: no visible global function definition for ‘lm’
    profilelike.lm: no visible binding for global variable ‘na.fail’
    profilelike.lm: no visible global function definition for ‘logLik’
    profilelike.lme: no visible global function definition for
     ‘model.frame’
    profilelike.lme: no visible global function definition for
     ‘model.matrix’
    profilelike.lme: no visible global function definition for
     ‘model.response’
    profilelike.lme: no visible global function definition for ‘lm’
    profilelike.lme: no visible binding for global variable ‘na.fail’
    profilelike.lme: no visible global function definition for ‘lme’
    profilelike.lme: no visible global function definition for ‘logLik’
    profilelike.plot: no visible global function definition for ‘plot’
    profilelike.plot: no visible global function definition for ‘lines’
    profilelike.plot: no visible global function definition for ‘abline’
    profilelike.plot: no visible global function definition for ‘text’
    profilelike.polr: no visible global function definition for
     ‘model.frame’
    profilelike.polr: no visible global function definition for
     ‘model.matrix’
    profilelike.polr: no visible global function definition for
     ‘model.response’
    profilelike.polr: no visible global function definition for ‘polr’
    profilelike.polr: no visible binding for global variable ‘na.fail’
    profilelike.polr: no visible global function definition for ‘logLik’
    Undefined global functions or variables:
     abline binomial chisq.test fisher.test gaussian glm gls lines lm lme
     logLik model.frame model.matrix model.response na.fail optimize
     pchisq plot polr summary.glm text
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.1
Check: R code for possible problems
Result: NOTE
    LR.pvalue: warning in matrix(c(y1, y2, (n1 - y1), (n2 - y2)), nr = 2,
     dimnames = list(c("treat", "control"), c("Success", "No success"))):
     partial argument match of 'nr' to 'nrow'
    profilelike.gls: no visible global function definition for ‘gls’
    profilelike.lme: no visible global function definition for ‘lme’
    profilelike.polr: no visible global function definition for ‘polr’
    Undefined global functions or variables:
     gls lme polr
Flavor: r-devel-osx-x86_64-clang

Version: 1.1
Check: R code for possible problems
Result: NOTE
    LR.pvalue: warning in matrix(c(y1, y2, (n1 - y1), (n2 - y2)), nr = 2,
     dimnames = list(c("treat", "control"), c("Success", "No success"))):
     partial argument match of ‘nr’ to ‘nrow’
    profilelike.gls: no visible global function definition for ‘gls’
    profilelike.lme: no visible global function definition for ‘lme’
    profilelike.polr: no visible global function definition for ‘polr’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64