CRAN Package Check Results for Package R2BayesX

Last updated on 2015-09-01 21:47:13.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0-0 3.91 65.64 69.54 NOTE
r-devel-linux-x86_64-debian-gcc 1.0-0 3.94 62.52 66.46 NOTE
r-devel-linux-x86_64-fedora-clang 1.0-0 127.30 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0-0 125.88 NOTE
r-devel-osx-x86_64-clang 1.0-0 116.03 OK
r-devel-windows-ix86+x86_64 1.0-0 22.00 138.00 160.00 NOTE
r-patched-linux-x86_64 1.0-0 4.10 65.80 69.91 OK
r-release-linux-x86_64 1.0-0 4.43 65.85 70.28 OK
r-release-osx-x86_64-mavericks 1.0-0 OK
r-release-windows-ix86+x86_64 1.0-0 23.00 190.00 213.00 OK
r-oldrel-windows-ix86+x86_64 1.0-0 24.00 177.00 201.00 OK

Check Details

Version: 1.0-0
Check: R code for possible problems
Result: NOTE
    .print_summary_bayesx: no visible global function definition for
     ‘printCoefmat’
    GAMart: no visible global function definition for ‘runif’
    GAMart : f5: no visible global function definition for ‘rnorm’
    GAMart : f6: no visible global function definition for ‘rnorm’
    GAMart: no visible global function definition for ‘rnorm’
    GAMart: no visible global function definition for ‘quantile’
    bayesx: no visible global function definition for ‘runif’
    bayesx.construct.kr.smooth.spec: no visible global function definition
     for ‘write.table’
    bayesx.construct.kriging.smooth.spec: no visible global function
     definition for ‘write.table’
    bayesx.construct.mrf.smooth.spec: no visible global function definition
     for ‘is’
    bayesx.construct.spatial.smooth.spec: no visible global function
     definition for ‘is’
    bayesx.control: no visible global function definition for ‘runif’
    bayesx.reformate: no visible global function definition for ‘pt’
    centroidpos: no visible global function definition for ‘na.omit’
    centroids: no visible global function definition for ‘na.omit’
    centroidtext: no visible global function definition for ‘text’
    colorlegend: no visible global function definition for ‘par’
    colorlegend: no visible global function definition for ‘na.omit’
    colorlegend: no visible global function definition for ‘head’
    colorlegend: no visible global function definition for ‘tail’
    colorlegend: no visible global function definition for ‘axis’
    colorlegend: no visible global function definition for ‘text’
    colorlegend: no visible global function definition for ‘mtext’
    confbayesx: no visible global function definition for ‘qt’
    confbayesx: no visible binding for global variable ‘quantile’
    confint.bayesx: no visible global function definition for ‘coef’
    d2contrsum: no visible global function definition for ‘C’
    d2contrsum: no visible binding for global variable ‘contr.sum’
    find.fixed.effects : fixed2table: no visible global function definition
     for ‘read.table’
    find.fixed.effects: no visible global function definition for
     ‘read.table’
    find.limits : myrange: no visible global function definition for
     ‘na.omit’
    find.smooth.random: no visible global function definition for
     ‘read.table’
    get.eta: no visible global function definition for ‘na.omit’
    get.scale: no visible global function definition for ‘read.table’
    interp2: no visible global function definition for ‘predict’
    interp2: no visible global function definition for ‘chull’
    model.frame.bayesx: no visible global function definition for ‘terms’
    parse.bayesx.input: no visible binding for global variable ‘na.fail’
    parse.bayesx.input: no visible global function definition for ‘terms’
    parse.bayesx.input: no visible global function definition for
     ‘as.formula’
    plot.bayesx: no visible global function definition for ‘par’
    plot.mrf.bayesx: no visible global function definition for ‘abline’
    plot.varying.bayesx: no visible global function definition for ‘par’
    plot2d: no visible global function definition for ‘read.table’
    plot2d: no visible global function definition for ‘model.frame’
    plot2d: no visible global function definition for ‘as.formula’
    plot2d: no visible global function definition for ‘box’
    plot2d: no visible global function definition for ‘axis’
    plot2d.default: no visible global function definition for ‘na.omit’
    plot2d.default: no visible global function definition for ‘lines’
    plot3d: no visible global function definition for ‘read.table’
    plot3d: no visible global function definition for ‘model.frame’
    plot3d: no visible global function definition for ‘par’
    plot3d: no visible global function definition for ‘trans3d’
    plot3d: no visible global function definition for ‘points’
    plot3d: no visible global function definition for ‘layout’
    plot3d: no visible global function definition for ‘lcm’
    plotblock: no visible global function definition for ‘model.frame’
    plotblock: no visible global function definition for ‘as.formula’
    plotblock: no visible global function definition for ‘par’
    plotblock: no visible global function definition for ‘box’
    plotblock: no visible global function definition for ‘axis’
    plotmap: no visible global function definition for ‘par’
    plotmap: no visible global function definition for ‘layout’
    plotmap: no visible global function definition for ‘lcm’
    plotmap: no visible global function definition for ‘slot’
    plotmap: no visible global function definition for ‘rect’
    plotmap: no visible global function definition for ‘points’
    plotmap: no visible global function definition for ‘mtext’
    plotsamples: no visible global function definition for ‘getS3method’
    plotsamples: no visible global function definition for ‘par’
    plotsamples: no visible global function definition for ‘box’
    plotsamples: no visible global function definition for ‘axis’
    plotsamples: no visible global function definition for ‘mtext’
    plotsurf: no visible global function definition for ‘read.table’
    predict.bayesx: no visible binding for global variable ‘na.pass’
    predict.bayesx: no visible global function definition for ‘model.frame’
    predict.bayesx: no visible global function definition for
     ‘model.weights’
    predict.bayesx: no visible global function definition for ‘update’
    predict.bayesx: no visible global function definition for ‘fitted’
    r: no visible binding for global variable ‘na.fail’
    r: no visible global function definition for ‘as.formula’
    r: no visible global function definition for ‘terms.formula’
    read.bayesx.model.output: no visible global function definition for
     ‘read.table’
    read.bnd: no visible global function definition for ‘na.omit’
    setmfrow: no visible global function definition for ‘par’
    setmfrow: no visible global function definition for ‘n2mfrow’
    sliceplot: no visible global function definition for ‘model.frame’
    sliceplot: no visible global function definition for ‘quantile’
    sp2bnd: no visible binding for global variable ‘slot’
    sp2bnd: no visible global function definition for ‘is’
    split.terms: no visible global function definition for ‘na.omit’
    which.plots: no visible global function definition for ‘par’
    which.plots: no visible global function definition for ‘n2mfrow’
    which.plots: no visible global function definition for ‘density’
    which.plots: no visible global function definition for ‘hist’
    which.plots: no visible global function definition for ‘box’
    which.plots: no visible global function definition for ‘sd’
    which.plots: no visible global function definition for ‘abline’
    which.plots: no visible global function definition for ‘mtext’
    write.bayesx.input: no visible global function definition for
     ‘model.matrix’
    write.bayesx.input: no visible global function definition for
     ‘as.formula’
    write.bayesx.input: no visible global function definition for
     ‘model.offset’
    write.bayesx.input: no visible global function definition for
     ‘model.weights’
    write.bayesx.input: no visible global function definition for
     ‘write.table’
    write.bnd: no visible global function definition for ‘complete.cases’
    write.bnd: no visible global function definition for ‘write.table’
    write.term.info: no visible global function definition for
     ‘model.matrix’
    write.term.info: no visible global function definition for ‘as.formula’
    Undefined global functions or variables:
     C abline as.formula axis box chull coef complete.cases contr.sum
     density fitted getS3method head hist is layout lcm lines model.frame
     model.matrix model.offset model.weights mtext n2mfrow na.fail na.omit
     na.pass par points predict printCoefmat pt qt quantile read.table
     rect rnorm runif sd slot tail terms terms.formula text trans3d update
     write.table
    Consider adding
     importFrom("grDevices", "chull", "n2mfrow", "trans3d")
     importFrom("graphics", "abline", "axis", "box", "hist", "layout",
     "lcm", "lines", "mtext", "par", "points", "rect", "text")
     importFrom("methods", "is", "slot")
     importFrom("stats", "C", "as.formula", "coef", "complete.cases",
     "contr.sum", "density", "fitted", "model.frame",
     "model.matrix", "model.offset", "model.weights", "na.fail",
     "na.omit", "na.pass", "predict", "printCoefmat", "pt", "qt",
     "quantile", "rnorm", "runif", "sd", "terms",
     "terms.formula", "update")
     importFrom("utils", "getS3method", "head", "read.table", "tail",
     "write.table")
    to your NAMESPACE (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64