CRAN Package Check Results for Package R2admb

Last updated on 2016-12-05 16:47:35.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.7.13 1.11 37.31 38.42 WARN
r-devel-linux-x86_64-debian-gcc 0.7.13 1.03 36.66 37.69 WARN
r-devel-linux-x86_64-fedora-clang 0.7.13 66.89 WARN --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 0.7.13 64.28 WARN --no-stop-on-test-error
r-devel-macos-x86_64-clang 0.7.13 45.16 WARN
r-devel-windows-ix86+x86_64 0.7.13 3.00 59.00 62.00 WARN
r-patched-linux-x86_64 0.7.13 0.80 27.41 28.21 NOTE
r-patched-solaris-sparc 0.7.13 243.20 NOTE
r-patched-solaris-x86 0.7.13 51.20 NOTE
r-release-linux-x86_64 0.7.13 0.88 27.37 28.25 NOTE
r-release-osx-x86_64-mavericks 0.7.13 NOTE
r-release-windows-ix86+x86_64 0.7.13 6.00 60.00 66.00 NOTE
r-oldrel-windows-ix86+x86_64 0.7.13 7.00 57.00 64.00 OK

Check Details

Version: 0.7.13
Check: R code for possible problems
Result: NOTE
    AIC.admb: no visible global function definition for ‘deviance’
    AIC.admb: no visible global function definition for ‘coef’
    check_section : make_names: no visible global function definition for
     ‘na.omit’
    compile_admb: no visible global function definition for ‘head’
    confint.admb: no visible global function definition for ‘coef’
    confint.admb: no visible global function definition for ‘qnorm’
    confint.admb: no visible binding for global variable ‘quantile’
    dat_write: no visible global function definition for ‘write.table’
    logLik.admb: no visible global function definition for ‘coef’
    pin_write: no visible global function definition for ‘write.table’
    print.admb: no visible global function definition for ‘coef’
    print.summary.admb: no visible global function definition for
     ‘printCoefmat’
    read_admb: no visible global function definition for ‘read.table’
    read_pars0: no visible global function definition for ‘count.fields’
    reptoRlist: no visible global function definition for ‘read.table’
    rt: no visible global function definition for ‘read.table’
    summary.admb: no visible global function definition for ‘coef’
    summary.admb: no visible global function definition for ‘vcov’
    summary.admb: no visible global function definition for ‘pnorm’
    write_dat: no visible global function definition for ‘write.table’
    write_pin: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     coef count.fields deviance head na.omit pnorm printCoefmat qnorm
     quantile read.table vcov write.table
    Consider adding
     importFrom("stats", "coef", "deviance", "na.omit", "pnorm",
     "printCoefmat", "qnorm", "quantile", "vcov")
     importFrom("utils", "count.fields", "head", "read.table",
     "write.table")
    to your NAMESPACE file.
    
    Found the following calls to attach():
    File ‘R2admb/R/check_section.R’:
     attach(R_list, name = "R_list", warn.conflicts = FALSE)
    See section ‘Good practice’ in ‘?attach’.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.7.13
Check: files in ‘vignettes’
Result: WARN
    Files in the 'vignettes' directory newer than all files in 'inst/doc':
     ‘Makefile’
    Files in the 'vignettes' directory newer than same file in 'inst/doc':
     ‘Reedfrog_runs.RData’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 0.7.13
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    AIC.admb: no visible global function definition for ‘deviance’
    AIC.admb: no visible global function definition for ‘coef’
    check_section : make_names: no visible global function definition for
     ‘na.omit’
    compile_admb: no visible global function definition for ‘head’
    confint.admb: no visible global function definition for ‘coef’
    confint.admb: no visible global function definition for ‘qnorm’
    confint.admb: no visible binding for global variable ‘quantile’
    dat_write: no visible global function definition for ‘write.table’
    logLik.admb: no visible global function definition for ‘coef’
    pin_write: no visible global function definition for ‘write.table’
    print.admb: no visible global function definition for ‘coef’
    print.summary.admb: no visible global function definition for
     ‘printCoefmat’
    read_admb: no visible global function definition for ‘read.table’
    read_pars0: no visible global function definition for ‘count.fields’
    reptoRlist: no visible global function definition for ‘read.table’
    rt: no visible global function definition for ‘read.table’
    summary.admb: no visible global function definition for ‘coef’
    summary.admb: no visible global function definition for ‘vcov’
    summary.admb: no visible global function definition for ‘pnorm’
    write_dat: no visible global function definition for ‘write.table’
    write_pin: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     coef count.fields deviance head na.omit pnorm printCoefmat qnorm
     quantile read.table vcov write.table
    Consider adding
     importFrom("stats", "coef", "deviance", "na.omit", "pnorm",
     "printCoefmat", "qnorm", "quantile", "vcov")
     importFrom("utils", "count.fields", "head", "read.table",
     "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.7.13
Flags: --no-stop-on-test-error
Check: files in ‘vignettes’
Result: WARN
    Files in the 'vignettes' directory newer than all files in 'inst/doc':
     ‘Makefile’
    Files in the 'vignettes' directory newer than same file in 'inst/doc':
     ‘Reedfrog_runs.RData’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.7.13
Check: R code for possible problems
Result: NOTE
    AIC.admb: no visible global function definition for ‘deviance’
    AIC.admb: no visible global function definition for ‘coef’
    check_section : make_names: no visible global function definition for
     ‘na.omit’
    compile_admb: no visible global function definition for ‘head’
    confint.admb: no visible global function definition for ‘coef’
    confint.admb: no visible global function definition for ‘qnorm’
    confint.admb: no visible binding for global variable ‘quantile’
    dat_write: no visible global function definition for ‘write.table’
    logLik.admb: no visible global function definition for ‘coef’
    pin_write: no visible global function definition for ‘write.table’
    print.admb: no visible global function definition for ‘coef’
    print.summary.admb: no visible global function definition for
     ‘printCoefmat’
    read_admb: no visible global function definition for ‘read.table’
    read_pars0: no visible global function definition for ‘count.fields’
    reptoRlist: no visible global function definition for ‘read.table’
    rt: no visible global function definition for ‘read.table’
    summary.admb: no visible global function definition for ‘coef’
    summary.admb: no visible global function definition for ‘vcov’
    summary.admb: no visible global function definition for ‘pnorm’
    write_dat: no visible global function definition for ‘write.table’
    write_pin: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     coef count.fields deviance head na.omit pnorm printCoefmat qnorm
     quantile read.table vcov write.table
    Consider adding
     importFrom("stats", "coef", "deviance", "na.omit", "pnorm",
     "printCoefmat", "qnorm", "quantile", "vcov")
     importFrom("utils", "count.fields", "head", "read.table",
     "write.table")
    to your NAMESPACE file.
Flavors: r-devel-macos-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64