Last updated on 2022-08-11 13:55:10 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 7.10 | 72.87 | 79.97 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 5.09 | 54.49 | 59.58 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.0 | 108.35 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.0 | 107.96 | OK | |||
| r-devel-windows-x86_64 | 1.0.0 | 193.00 | 142.00 | 335.00 | ERROR | |
| r-patched-linux-x86_64 | 1.0.0 | 4.15 | 67.98 | 72.13 | ERROR | |
| r-release-linux-x86_64 | 1.0.0 | ERROR | ||||
| r-release-macos-arm64 | 1.0.0 | 73.00 | OK | |||
| r-release-macos-x86_64 | 1.0.0 | 102.00 | OK | |||
| r-release-windows-x86_64 | 1.1.0 | 179.00 | 159.00 | 338.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.0 | 78.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.0 | 93.00 | OK | |||
| r-oldrel-windows-ix86+x86_64 | 1.0.0 | 16.00 | 130.00 | 146.00 | ERROR |
Version: 1.0.0
Check: package subdirectories
Result: NOTE
Problems with news in 'NEWS.md':
Cannot extract version info from the following section titles:
GitHub Commits and Releases
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running 'test-all.R' [9s/27s]
Running the tests in 'tests/test-all.R' failed.
Complete output:
> # Modeled after the R6 testing structure: https://github.com/wch/R6/blob/master/tests/testthat.R
> library(testthat)
> library(REDCapR)
>
> # source("R/helpers-testing.R")
> testthat::test_check("REDCapR")
The REDCapR read/export operation was not successful. The error message was:
<!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML 2.0//EN">
<html><head>
<title>404 Not Found</title>
</head><body>
<h1>Not Found</h1>
<p>The requested URL was not found on this server.</p>
</body></html>
The data dictionary describing 17 fields was read from REDCap in 0.2 seconds. The http status code was 200.
5 records and 1 columns were read from REDCap in 0.3 seconds. The http status code was 200.
Starting to read 5 records at 2022-08-08 19:29:55.
Reading batch 1 of 1, with subjects 1 through 5 (ie, 5 unique subject records).
5 records and 25 columns were read from REDCap in 0.3 seconds. The http status code was 200.
-- Column specification --------------------------------------------------------
cols(
.default = col_double(),
name_first = col_character(),
name_last = col_character(),
address = col_character(),
telephone = col_character(),
email = col_character(),
dob = col_date(format = ""),
comments = col_character(),
mugshot = col_character()
)
i Use `spec()` for the full column specifications.
Starting to update 32 records to be written at 2022-08-08 19:30:01.
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-08 19:30:02.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-08 19:30:04.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 2 of 4, with indices 11 through 20.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 3 of 4, with indices 21 through 30.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 4 of 4, with indices 31 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
== Skipped tests ===============================================================
* On CRAN (109)
== Failed tests ================================================================
-- Error (test-read-errors.R:9:3): One Shot: Bad Uri -Not HTTPS ----------------
Error in `curl::curl_fetch_memory(url, handle = handle)`: GnuTLS recv error (-110): The TLS connection was non-properly terminated.
Backtrace:
x
1. +-testthat::expect_message(...) at test-read-errors.R:9:2
2. | \-testthat:::expect_condition_matching(...)
3. | \-testthat:::quasi_capture(...)
4. | +-testthat (local) .capture(...)
5. | | \-base::withCallingHandlers(...)
6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. \-REDCapR::redcap_read_oneshot(...)
8. \-REDCapR:::kernel_api(redcap_uri, post_body, config_options)
9. \-httr::POST(url = redcap_uri, body = post_body, config = config_options)
10. \-httr:::request_perform(req, hu$handle$handle)
11. +-httr:::request_fetch(req$output, req$url, handle)
12. \-httr:::request_fetch.write_memory(req$output, req$url, handle)
13. \-curl::curl_fetch_memory(url, handle = handle)
-- Failure (test-read-errors.R:39:3): One Shot: Bad Uri -wrong address ---------
returned_object$raw_text (`actual`) not equal to `expected_message` (`expected`).
lines(actual) vs lines(expected)
- "<!DOCTYPE HTML PUBLIC \"-//IETF//DTD HTML 2.0//EN\">"
- "<html><head>"
- "<title>404 Not Found</title>"
- "</head><body>"
- "<h1>Not Found</h1>"
- "<p>The requested URL was not found on this server.</p>"
- "</body></html>"
+ "<!DOCTYPE html PUBLIC \"-//W3C//DTD XHTML 1.0 Strict//EN\" \"http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd\">"
+ "<html xmlns=\"http://www.w3.org/1999/xhtml\">"
+ "<head>"
+ "<meta http-equiv=\"Content-Type\" content=\"text/html; charset=iso-8859-1\"/>"
+ "<title>404 - File or directory not found.</title>"
+ "<style type=\"text/css\">"
+ "<!--"
+ "body{margin:0;font-size:.7em;font-family:Verdana, Arial, Helvetica, sans-serif;background:#EEEEEE;}"
+ "fieldset{padding:0 15px 10px 15px;} "
+ "h1{font-size:2.4em;margin:0;color:#FFF;}"
and 20 more ...
-- Error (test-read-errors.R:48:3): Batch: Bad Uri -Not HTTPS ------------------
Error in `curl::curl_fetch_memory(url, handle = handle)`: GnuTLS recv error (-110): The TLS connection was non-properly terminated.
Backtrace:
x
1. +-testthat::expect_message(...) at test-read-errors.R:48:2
2. | \-testthat:::expect_condition_matching(...)
3. | \-testthat:::quasi_capture(...)
4. | +-testthat (local) .capture(...)
5. | | \-base::withCallingHandlers(...)
6. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. \-REDCapR::redcap_read(...)
8. \-REDCapR::redcap_metadata_read(...)
9. \-REDCapR:::kernel_api(redcap_uri, post_body, config_options)
10. \-httr::POST(url = redcap_uri, body = post_body, config = config_options)
11. \-httr:::request_perform(req, hu$handle$handle)
12. +-httr:::request_fetch(req$output, req$url, handle)
13. \-httr:::request_fetch.write_memory(req$output, req$url, handle)
14. \-curl::curl_fetch_memory(url, handle = handle)
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.0
Check: HTML version of manual
Result: NOTE
Found the following HTML validation problems:
redcap_read_oneshot.html:205:1: Warning: nested emphasis <em>
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘test-all.R’ [7s/21s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
> # Modeled after the R6 testing structure: https://github.com/wch/R6/blob/master/tests/testthat.R
> library(testthat)
> library(REDCapR)
>
> # source("R/helpers-testing.R")
> testthat::test_check("REDCapR")
The REDCapR read/export operation was not successful. The error message was:
<!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML 2.0//EN">
<html><head>
<title>404 Not Found</title>
</head><body>
<h1>Not Found</h1>
<p>The requested URL was not found on this server.</p>
</body></html>
The data dictionary describing 17 fields was read from REDCap in 0.2 seconds. The http status code was 200.
5 records and 1 columns were read from REDCap in 0.2 seconds. The http status code was 200.
Starting to read 5 records at 2022-08-10 16:55:42.
Reading batch 1 of 1, with subjects 1 through 5 (ie, 5 unique subject records).
5 records and 25 columns were read from REDCap in 0.3 seconds. The http status code was 200.
-- Column specification --------------------------------------------------------
cols(
.default = col_double(),
name_first = col_character(),
name_last = col_character(),
address = col_character(),
telephone = col_character(),
email = col_character(),
dob = col_date(format = ""),
comments = col_character(),
mugshot = col_character()
)
i Use `spec()` for the full column specifications.
Starting to update 32 records to be written at 2022-08-10 16:55:47.
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-10 16:55:48.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-10 16:55:50.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 2 of 4, with indices 11 through 20.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 3 of 4, with indices 21 through 30.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 4 of 4, with indices 31 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
══ Skipped tests ═══════════════════════════════════════════════════════════════
• On CRAN (109)
══ Failed tests ════════════════════════════════════════════════════════════════
── Error (test-read-errors.R:9:3): One Shot: Bad Uri -Not HTTPS ────────────────
Error in `curl::curl_fetch_memory(url, handle = handle)`: GnuTLS recv error (-110): The TLS connection was non-properly terminated.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-read-errors.R:9:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─REDCapR::redcap_read_oneshot(...)
8. └─REDCapR:::kernel_api(redcap_uri, post_body, config_options)
9. └─httr::POST(url = redcap_uri, body = post_body, config = config_options)
10. └─httr:::request_perform(req, hu$handle$handle)
11. ├─httr:::request_fetch(req$output, req$url, handle)
12. └─httr:::request_fetch.write_memory(req$output, req$url, handle)
13. └─curl::curl_fetch_memory(url, handle = handle)
── Failure (test-read-errors.R:39:3): One Shot: Bad Uri -wrong address ─────────
returned_object$raw_text (`actual`) not equal to `expected_message` (`expected`).
lines(actual) vs lines(expected)
- "<!DOCTYPE HTML PUBLIC \"-//IETF//DTD HTML 2.0//EN\">"
- "<html><head>"
- "<title>404 Not Found</title>"
- "</head><body>"
- "<h1>Not Found</h1>"
- "<p>The requested URL was not found on this server.</p>"
- "</body></html>"
+ "<!DOCTYPE html PUBLIC \"-//W3C//DTD XHTML 1.0 Strict//EN\" \"http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd\">"
+ "<html xmlns=\"http://www.w3.org/1999/xhtml\">"
+ "<head>"
+ "<meta http-equiv=\"Content-Type\" content=\"text/html; charset=iso-8859-1\"/>"
+ "<title>404 - File or directory not found.</title>"
+ "<style type=\"text/css\">"
+ "<!--"
+ "body{margin:0;font-size:.7em;font-family:Verdana, Arial, Helvetica, sans-serif;background:#EEEEEE;}"
+ "fieldset{padding:0 15px 10px 15px;} "
+ "h1{font-size:2.4em;margin:0;color:#FFF;}"
and 20 more ...
── Error (test-read-errors.R:48:3): Batch: Bad Uri -Not HTTPS ──────────────────
Error in `curl::curl_fetch_memory(url, handle = handle)`: GnuTLS recv error (-110): The TLS connection was non-properly terminated.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-read-errors.R:48:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─REDCapR::redcap_read(...)
8. └─REDCapR::redcap_metadata_read(...)
9. └─REDCapR:::kernel_api(redcap_uri, post_body, config_options)
10. └─httr::POST(url = redcap_uri, body = post_body, config = config_options)
11. └─httr:::request_perform(req, hu$handle$handle)
12. ├─httr:::request_fetch(req$output, req$url, handle)
13. └─httr:::request_fetch.write_memory(req$output, req$url, handle)
14. └─curl::curl_fetch_memory(url, handle = handle)
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: tests
Result: ERROR
Running 'test-all.R' [18s]
Running the tests in 'tests/test-all.R' failed.
Complete output:
> # Modeled after the R6 testing structure: https://github.com/wch/R6/blob/master/tests/testthat.R
> library(testthat)
> library(REDCapR)
>
> # source("R/helpers-testing.R")
> testthat::test_check("REDCapR")
The REDCapR read/export operation was not successful. The error message was:
<!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML 2.0//EN">
<html><head>
<title>404 Not Found</title>
</head><body>
<h1>Not Found</h1>
<p>The requested URL was not found on this server.</p>
</body></html>
The data dictionary describing 17 fields was read from REDCap in 0.2 seconds. The http status code was 200.
5 records and 1 columns were read from REDCap in 0.2 seconds. The http status code was 200.
Starting to read 5 records at 2022-08-10 11:33:27.
Reading batch 1 of 1, with subjects 1 through 5 (ie, 5 unique subject records).
5 records and 25 columns were read from REDCap in 0.3 seconds. The http status code was 200.
-- Column specification --------------------------------------------------------
cols(
.default = col_double(),
name_first = col_character(),
name_last = col_character(),
address = col_character(),
telephone = col_character(),
email = col_character(),
dob = col_date(format = ""),
comments = col_character(),
mugshot = col_character()
)
i Use `spec()` for the full column specifications.
Starting to update 32 records to be written at 2022-08-10 11:33:31.
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-10 11:33:32.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-10 11:33:34.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 2 of 4, with indices 11 through 20.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 3 of 4, with indices 21 through 30.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 4 of 4, with indices 31 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
══ Skipped tests ═══════════════════════════════════════════════════════════════
• On CRAN (109)
══ Failed tests ════════════════════════════════════════════════════════════════
── Error (test-read-errors.R:9:3): One Shot: Bad Uri -Not HTTPS ────────────────
Error in `curl::curl_fetch_memory(url, handle = handle)`: Failure when receiving data from the peer
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-read-errors.R:9:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─REDCapR::redcap_read_oneshot(...)
8. └─REDCapR:::kernel_api(redcap_uri, post_body, config_options)
9. └─httr::POST(url = redcap_uri, body = post_body, config = config_options)
10. └─httr:::request_perform(req, hu$handle$handle)
11. ├─httr:::request_fetch(req$output, req$url, handle)
12. └─httr:::request_fetch.write_memory(req$output, req$url, handle)
13. └─curl::curl_fetch_memory(url, handle = handle)
── Failure (test-read-errors.R:39:3): One Shot: Bad Uri -wrong address ─────────
returned_object$raw_text (`actual`) not equal to `expected_message` (`expected`).
lines(actual) vs lines(expected)
- "<!DOCTYPE HTML PUBLIC \"-//IETF//DTD HTML 2.0//EN\">"
- "<html><head>"
- "<title>404 Not Found</title>"
- "</head><body>"
- "<h1>Not Found</h1>"
- "<p>The requested URL was not found on this server.</p>"
- "</body></html>"
+ "<!DOCTYPE html PUBLIC \"-//W3C//DTD XHTML 1.0 Strict//EN\" \"http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd\">"
+ "<html xmlns=\"http://www.w3.org/1999/xhtml\">"
+ "<head>"
+ "<meta http-equiv=\"Content-Type\" content=\"text/html; charset=iso-8859-1\"/>"
+ "<title>404 - File or directory not found.</title>"
+ "<style type=\"text/css\">"
+ "<!--"
+ "body{margin:0;font-size:.7em;font-family:Verdana, Arial, Helvetica, sans-serif;background:#EEEEEE;}"
+ "fieldset{padding:0 15px 10px 15px;} "
+ "h1{font-size:2.4em;margin:0;color:#FFF;}"
and 20 more ...
── Error (test-read-errors.R:48:3): Batch: Bad Uri -Not HTTPS ──────────────────
Error in `curl::curl_fetch_memory(url, handle = handle)`: Failure when receiving data from the peer
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-read-errors.R:48:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─REDCapR::redcap_read(...)
8. └─REDCapR::redcap_metadata_read(...)
9. └─REDCapR:::kernel_api(redcap_uri, post_body, config_options)
10. └─httr::POST(url = redcap_uri, body = post_body, config = config_options)
11. └─httr:::request_perform(req, hu$handle$handle)
12. ├─httr:::request_fetch(req$output, req$url, handle)
13. └─httr:::request_fetch.write_memory(req$output, req$url, handle)
14. └─curl::curl_fetch_memory(url, handle = handle)
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
Error: Test failures
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘test-all.R’ [8s/22s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
> # Modeled after the R6 testing structure: https://github.com/wch/R6/blob/master/tests/testthat.R
> library(testthat)
> library(REDCapR)
>
> # source("R/helpers-testing.R")
> testthat::test_check("REDCapR")
The REDCapR read/export operation was not successful. The error message was:
<!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML 2.0//EN">
<html><head>
<title>404 Not Found</title>
</head><body>
<h1>Not Found</h1>
<p>The requested URL was not found on this server.</p>
</body></html>
The data dictionary describing 17 fields was read from REDCap in 0.3 seconds. The http status code was 200.
5 records and 1 columns were read from REDCap in 0.3 seconds. The http status code was 200.
Starting to read 5 records at 2022-08-09 23:30:37.
Reading batch 1 of 1, with subjects 1 through 5 (ie, 5 unique subject records).
5 records and 25 columns were read from REDCap in 0.3 seconds. The http status code was 200.
-- Column specification --------------------------------------------------------
cols(
.default = col_double(),
name_first = col_character(),
name_last = col_character(),
address = col_character(),
telephone = col_character(),
email = col_character(),
dob = col_date(format = ""),
comments = col_character(),
mugshot = col_character()
)
i Use `spec()` for the full column specifications.
Starting to update 32 records to be written at 2022-08-09 23:30:43.
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-09 23:30:44.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-09 23:30:45.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 2 of 4, with indices 11 through 20.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 3 of 4, with indices 21 through 30.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 4 of 4, with indices 31 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
══ Skipped tests ═══════════════════════════════════════════════════════════════
• On CRAN (109)
══ Failed tests ════════════════════════════════════════════════════════════════
── Error (test-read-errors.R:9:3): One Shot: Bad Uri -Not HTTPS ────────────────
Error in `curl::curl_fetch_memory(url, handle = handle)`: GnuTLS recv error (-110): The TLS connection was non-properly terminated.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-read-errors.R:9:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─REDCapR::redcap_read_oneshot(...)
8. └─REDCapR:::kernel_api(redcap_uri, post_body, config_options)
9. └─httr::POST(url = redcap_uri, body = post_body, config = config_options)
10. └─httr:::request_perform(req, hu$handle$handle)
11. ├─httr:::request_fetch(req$output, req$url, handle)
12. └─httr:::request_fetch.write_memory(req$output, req$url, handle)
13. └─curl::curl_fetch_memory(url, handle = handle)
── Failure (test-read-errors.R:39:3): One Shot: Bad Uri -wrong address ─────────
returned_object$raw_text (`actual`) not equal to `expected_message` (`expected`).
lines(actual) vs lines(expected)
- "<!DOCTYPE HTML PUBLIC \"-//IETF//DTD HTML 2.0//EN\">"
- "<html><head>"
- "<title>404 Not Found</title>"
- "</head><body>"
- "<h1>Not Found</h1>"
- "<p>The requested URL was not found on this server.</p>"
- "</body></html>"
+ "<!DOCTYPE html PUBLIC \"-//W3C//DTD XHTML 1.0 Strict//EN\" \"http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd\">"
+ "<html xmlns=\"http://www.w3.org/1999/xhtml\">"
+ "<head>"
+ "<meta http-equiv=\"Content-Type\" content=\"text/html; charset=iso-8859-1\"/>"
+ "<title>404 - File or directory not found.</title>"
+ "<style type=\"text/css\">"
+ "<!--"
+ "body{margin:0;font-size:.7em;font-family:Verdana, Arial, Helvetica, sans-serif;background:#EEEEEE;}"
+ "fieldset{padding:0 15px 10px 15px;} "
+ "h1{font-size:2.4em;margin:0;color:#FFF;}"
and 20 more ...
── Error (test-read-errors.R:48:3): Batch: Bad Uri -Not HTTPS ──────────────────
Error in `curl::curl_fetch_memory(url, handle = handle)`: GnuTLS recv error (-110): The TLS connection was non-properly terminated.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-read-errors.R:48:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─REDCapR::redcap_read(...)
8. └─REDCapR::redcap_metadata_read(...)
9. └─REDCapR:::kernel_api(redcap_uri, post_body, config_options)
10. └─httr::POST(url = redcap_uri, body = post_body, config = config_options)
11. └─httr:::request_perform(req, hu$handle$handle)
12. ├─httr:::request_fetch(req$output, req$url, handle)
13. └─httr:::request_fetch.write_memory(req$output, req$url, handle)
14. └─curl::curl_fetch_memory(url, handle = handle)
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘test-all.R’ [8s/34s]
Running the tests in ‘tests/test-all.R’ failed.
Complete output:
> # Modeled after the R6 testing structure: https://github.com/wch/R6/blob/master/tests/testthat.R
> library(testthat)
> library(REDCapR)
>
> # source("R/helpers-testing.R")
> testthat::test_check("REDCapR")
The REDCapR read/export operation was not successful. The error message was:
<!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML 2.0//EN">
<html><head>
<title>404 Not Found</title>
</head><body>
<h1>Not Found</h1>
<p>The requested URL was not found on this server.</p>
</body></html>
The data dictionary describing 17 fields was read from REDCap in 0.3 seconds. The http status code was 200.
5 records and 1 columns were read from REDCap in 0.3 seconds. The http status code was 200.
Starting to read 5 records at 2022-08-07 15:06:30.
Reading batch 1 of 1, with subjects 1 through 5 (ie, 5 unique subject records).
5 records and 25 columns were read from REDCap in 0.3 seconds. The http status code was 200.
-- Column specification --------------------------------------------------------
cols(
.default = col_double(),
name_first = col_character(),
name_last = col_character(),
address = col_character(),
telephone = col_character(),
email = col_character(),
dob = col_date(format = ""),
comments = col_character(),
mugshot = col_character()
)
i Use `spec()` for the full column specifications.
Starting to update 32 records to be written at 2022-08-07 15:06:36.
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-07 15:06:37.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-07 15:06:44.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 2 of 4, with indices 11 through 20.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 3 of 4, with indices 21 through 30.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 4 of 4, with indices 31 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
══ Skipped tests ═══════════════════════════════════════════════════════════════
• On CRAN (109)
══ Failed tests ════════════════════════════════════════════════════════════════
── Error (test-read-errors.R:9:3): One Shot: Bad Uri -Not HTTPS ────────────────
Error in `curl::curl_fetch_memory(url, handle = handle)`: GnuTLS recv error (-110): The TLS connection was non-properly terminated.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-read-errors.R:9:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─REDCapR::redcap_read_oneshot(...)
8. └─REDCapR:::kernel_api(redcap_uri, post_body, config_options)
9. └─httr::POST(url = redcap_uri, body = post_body, config = config_options)
10. └─httr:::request_perform(req, hu$handle$handle)
11. ├─httr:::request_fetch(req$output, req$url, handle)
12. └─httr:::request_fetch.write_memory(req$output, req$url, handle)
13. └─curl::curl_fetch_memory(url, handle = handle)
── Failure (test-read-errors.R:39:3): One Shot: Bad Uri -wrong address ─────────
returned_object$raw_text (`actual`) not equal to `expected_message` (`expected`).
lines(actual) vs lines(expected)
- "<!DOCTYPE HTML PUBLIC \"-//IETF//DTD HTML 2.0//EN\">"
- "<html><head>"
- "<title>404 Not Found</title>"
- "</head><body>"
- "<h1>Not Found</h1>"
- "<p>The requested URL was not found on this server.</p>"
- "</body></html>"
+ "<!DOCTYPE html PUBLIC \"-//W3C//DTD XHTML 1.0 Strict//EN\" \"http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd\">"
+ "<html xmlns=\"http://www.w3.org/1999/xhtml\">"
+ "<head>"
+ "<meta http-equiv=\"Content-Type\" content=\"text/html; charset=iso-8859-1\"/>"
+ "<title>404 - File or directory not found.</title>"
+ "<style type=\"text/css\">"
+ "<!--"
+ "body{margin:0;font-size:.7em;font-family:Verdana, Arial, Helvetica, sans-serif;background:#EEEEEE;}"
+ "fieldset{padding:0 15px 10px 15px;} "
+ "h1{font-size:2.4em;margin:0;color:#FFF;}"
and 20 more ...
── Error (test-read-errors.R:48:3): Batch: Bad Uri -Not HTTPS ──────────────────
Error in `curl::curl_fetch_memory(url, handle = handle)`: GnuTLS recv error (-110): The TLS connection was non-properly terminated.
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-read-errors.R:48:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─REDCapR::redcap_read(...)
8. └─REDCapR::redcap_metadata_read(...)
9. └─REDCapR:::kernel_api(redcap_uri, post_body, config_options)
10. └─httr::POST(url = redcap_uri, body = post_body, config = config_options)
11. └─httr:::request_perform(req, hu$handle$handle)
12. ├─httr:::request_fetch(req$output, req$url, handle)
13. └─httr:::request_fetch.write_memory(req$output, req$url, handle)
14. └─curl::curl_fetch_memory(url, handle = handle)
[ FAIL 3 | WARN 0 | SKIP 109 | PASS 157 ]
Error: Test failures
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running 'test-all.R' [19s]
Running the tests in 'tests/test-all.R' failed.
Complete output:
> # Modeled after the R6 testing structure: https://github.com/wch/R6/blob/master/tests/testthat.R
> library(testthat)
> library(REDCapR)
>
> # source("R/helpers-testing.R")
> testthat::test_check("REDCapR")
The REDCapR read/export operation was not successful. The error message was:
<?xml version="1.0" encoding="UTF-8" ?><hash><error>The requested method is not implemented.</error></hash>
The REDCapR read/export operation was not successful. The error message was:
<!DOCTYPE HTML PUBLIC "-//IETF//DTD HTML 2.0//EN">
<html><head>
<title>404 Not Found</title>
</head><body>
<h1>Not Found</h1>
<p>The requested URL was not found on this server.</p>
</body></html>
The data dictionary describing 17 fields was read from REDCap in 0.2 seconds. The http status code was 200.
5 records and 1 columns were read from REDCap in 0.2 seconds. The http status code was 200.
Starting to read 5 records at 2022-08-09 03:58:02.
Reading batch 1 of 1, with subjects 1 through 5 (ie, 5 unique subject records).
5 records and 25 columns were read from REDCap in 0.2 seconds. The http status code was 200.
-- Column specification --------------------------------------------------------
cols(
.default = col_double(),
name_first = col_character(),
name_last = col_character(),
address = col_character(),
telephone = col_character(),
email = col_character(),
dob = col_date(format = ""),
comments = col_character(),
mugshot = col_character()
)
i Use `spec()` for the full column specifications.
Starting to update 32 records to be written at 2022-08-09 03:58:06.
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-09 03:58:07.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 1 of 1, with indices 1 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Starting to update 32 records to be written at 2022-08-09 03:58:09.
Writing batch 1 of 4, with indices 1 through 10.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 2 of 4, with indices 11 through 20.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 3 of 4, with indices 21 through 30.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
Writing batch 4 of 4, with indices 31 through 32.
The REDCapR write/import operation was not successful. The error message was:
ERROR: You do not have API Import/Update privileges
[ FAIL 1 | WARN 0 | SKIP 109 | PASS 171 ]
== Skipped tests ===============================================================
* On CRAN (109)
== Failed tests ================================================================
-- Failure (test-read-errors.R:39:3): One Shot: Bad Uri -wrong address ---------
returned_object$raw_text (`actual`) not equal to `expected_message` (`expected`).
lines(actual) vs lines(expected)
- "<!DOCTYPE HTML PUBLIC \"-//IETF//DTD HTML 2.0//EN\">"
- "<html><head>"
- "<title>404 Not Found</title>"
- "</head><body>"
- "<h1>Not Found</h1>"
- "<p>The requested URL was not found on this server.</p>"
- "</body></html>"
+ "<!DOCTYPE html PUBLIC \"-//W3C//DTD XHTML 1.0 Strict//EN\" \"http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd\">"
+ "<html xmlns=\"http://www.w3.org/1999/xhtml\">"
+ "<head>"
+ "<meta http-equiv=\"Content-Type\" content=\"text/html; charset=iso-8859-1\"/>"
+ "<title>404 - File or directory not found.</title>"
+ "<style type=\"text/css\">"
+ "<!--"
+ "body{margin:0;font-size:.7em;font-family:Verdana, Arial, Helvetica, sans-serif;background:#EEEEEE;}"
+ "fieldset{padding:0 15px 10px 15px;} "
+ "h1{font-size:2.4em;margin:0;color:#FFF;}"
and 20 more ...
[ FAIL 1 | WARN 0 | SKIP 109 | PASS 171 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64