CRAN Package Check Results for Package RPMM

Last updated on 2015-07-04 21:46:49.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.20 0.91 15.60 16.51 NOTE
r-devel-linux-x86_64-debian-gcc 1.20 0.86 15.12 15.99 NOTE
r-devel-linux-x86_64-fedora-clang 1.20 31.96 NOTE
r-devel-linux-x86_64-fedora-gcc 1.20 30.41 NOTE
r-devel-osx-x86_64-clang 1.20 30.89 NOTE
r-devel-windows-ix86+x86_64 1.20 6.00 26.00 32.00 NOTE
r-patched-linux-x86_64 1.20 0.89 15.91 16.80 NOTE
r-patched-solaris-sparc 1.20 212.40 NOTE
r-patched-solaris-x86 1.20 44.00 NOTE
r-release-linux-x86_64 1.20 0.90 15.65 16.54 NOTE
r-release-osx-x86_64-mavericks 1.20 OK
r-release-windows-ix86+x86_64 1.20 6.00 28.00 34.00 OK
r-oldrel-windows-ix86+x86_64 1.20 5.00 44.00 49.00 OK

Check Details

Version: 1.20
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.blcTree plot.glcTree predict.blcTree predict.glcTree
     print.blcTree print.glcTree
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.20
Check: R code for possible problems
Result: NOTE
    betaEst: no visible global function definition for ‘optim’
    betaEstMultiple: no visible global function definition for ‘dbeta’
    betaObjf: no visible global function definition for ‘dbeta’
    blc: no visible global function definition for ‘dbeta’
    blcInitializeSplitDichotomizeUsingMean : <anonymous>: no visible global
     function definition for ‘quantile’
    blcInitializeSplitEigen : <anonymous>: no visible binding for global
     variable ‘sd’
    blcInitializeSplitEigen : <anonymous>: no visible global function
     definition for ‘var’
    blcInitializeSplitFanny : <anonymous>: no visible global function
     definition for ‘runif’
    blcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘hclust’
    blcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘dist’
    blcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘cutree’
    blcSplit: no visible global function definition for ‘dbeta’
    blcSplitCriterionLRT: no visible global function definition for
     ‘pchisq’
    blcTreeOverallBIC : f1: no visible global function definition for
     ‘dbeta’
    gaussEstMultiple: no visible global function definition for ‘dnorm’
    glc: no visible global function definition for ‘dnorm’
    glcInitializeSplitEigen : <anonymous>: no visible global function
     definition for ‘var’
    glcInitializeSplitFanny : <anonymous>: no visible global function
     definition for ‘runif’
    glcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘hclust’
    glcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘dist’
    glcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘cutree’
    glcSplit: no visible global function definition for ‘dnorm’
    glcSplitCriterionLRT: no visible global function definition for
     ‘pchisq’
    glcTreeOverallBIC : f1: no visible global function definition for
     ‘dnorm’
    glmLC: Error while checking: invalid ‘envir’ argument
    llikeRPMMObject: no visible global function definition for ‘dbeta’
    llikeRPMMObject: no visible global function definition for ‘dnorm’
    plotImage.blcTree: no visible global function definition for
     ‘colorRampPalette’
    plotImage.blcTree: no visible global function definition for ‘hclust’
    plotImage.blcTree: no visible global function definition for ‘dist’
    plotImage.blcTree: no visible global function definition for ‘image’
    plotImage.blcTree: no visible global function definition for ‘rect’
    plotImage.blcTree: no visible global function definition for ‘abline’
    plotImage.blcTree: no visible global function definition for ‘axis’
    plotImage.glcTree: no visible global function definition for
     ‘colorRampPalette’
    plotImage.glcTree: no visible global function definition for ‘hclust’
    plotImage.glcTree: no visible global function definition for ‘dist’
    plotImage.glcTree: no visible global function definition for ‘image’
    plotImage.glcTree: no visible global function definition for ‘rect’
    plotImage.glcTree: no visible global function definition for ‘abline’
    plotImage.glcTree: no visible global function definition for ‘axis’
    plotTree.blcTree: no visible global function definition for ‘plot’
    plotTree.blcTree: no visible global function definition for ‘points’
    plotTree.blcTree: no visible global function definition for ‘text’
    plotTree.blcTree : f: no visible global function definition for ‘lines’
    plotTree.blcTree : f: no visible global function definition for
     ‘points’
    plotTree.blcTree : f: no visible global function definition for ‘text’
    plotTree.glcTree: no visible global function definition for ‘plot’
    plotTree.glcTree: no visible global function definition for ‘points’
    plotTree.glcTree: no visible global function definition for ‘text’
    plotTree.glcTree : f: no visible global function definition for ‘lines’
    plotTree.glcTree : f: no visible global function definition for
     ‘points’
    plotTree.glcTree : f: no visible global function definition for ‘text’
    Undefined global functions or variables:
     abline axis colorRampPalette cutree dbeta dist dnorm hclust image
     lines optim pchisq plot points quantile rect runif sd text var
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.20
Check: R code for possible problems
Result: NOTE
    betaEst: no visible global function definition for 'optim'
    betaEstMultiple: no visible global function definition for 'dbeta'
    betaObjf: no visible global function definition for 'dbeta'
    blc: no visible global function definition for 'dbeta'
    blcInitializeSplitDichotomizeUsingMean : <anonymous>: no visible global
     function definition for 'quantile'
    blcInitializeSplitEigen : <anonymous>: no visible binding for global
     variable 'sd'
    blcInitializeSplitEigen : <anonymous>: no visible global function
     definition for 'var'
    blcInitializeSplitFanny : <anonymous>: no visible global function
     definition for 'runif'
    blcInitializeSplitHClust : <anonymous>: no visible global function
     definition for 'hclust'
    blcInitializeSplitHClust : <anonymous>: no visible global function
     definition for 'dist'
    blcInitializeSplitHClust : <anonymous>: no visible global function
     definition for 'cutree'
    blcSplit: no visible global function definition for 'dbeta'
    blcSplitCriterionLRT: no visible global function definition for
     'pchisq'
    blcTreeOverallBIC : f1: no visible global function definition for
     'dbeta'
    gaussEstMultiple: no visible global function definition for 'dnorm'
    glc: no visible global function definition for 'dnorm'
    glcInitializeSplitEigen : <anonymous>: no visible global function
     definition for 'var'
    glcInitializeSplitFanny : <anonymous>: no visible global function
     definition for 'runif'
    glcInitializeSplitHClust : <anonymous>: no visible global function
     definition for 'hclust'
    glcInitializeSplitHClust : <anonymous>: no visible global function
     definition for 'dist'
    glcInitializeSplitHClust : <anonymous>: no visible global function
     definition for 'cutree'
    glcSplit: no visible global function definition for 'dnorm'
    glcSplitCriterionLRT: no visible global function definition for
     'pchisq'
    glcTreeOverallBIC : f1: no visible global function definition for
     'dnorm'
    glmLC: no visible global function definition for 'quasibinomial'
    glmLC: no visible global function definition for 'glm'
    llikeRPMMObject: no visible global function definition for 'dbeta'
    llikeRPMMObject: no visible global function definition for 'dnorm'
    plotImage.blcTree: no visible global function definition for
     'colorRampPalette'
    plotImage.blcTree: no visible global function definition for 'hclust'
    plotImage.blcTree: no visible global function definition for 'dist'
    plotImage.blcTree: no visible global function definition for 'image'
    plotImage.blcTree: no visible global function definition for 'rect'
    plotImage.blcTree: no visible global function definition for 'abline'
    plotImage.blcTree: no visible global function definition for 'axis'
    plotImage.glcTree: no visible global function definition for
     'colorRampPalette'
    plotImage.glcTree: no visible global function definition for 'hclust'
    plotImage.glcTree: no visible global function definition for 'dist'
    plotImage.glcTree: no visible global function definition for 'image'
    plotImage.glcTree: no visible global function definition for 'rect'
    plotImage.glcTree: no visible global function definition for 'abline'
    plotImage.glcTree: no visible global function definition for 'axis'
    plotTree.blcTree: no visible global function definition for 'plot'
    plotTree.blcTree: no visible global function definition for 'points'
    plotTree.blcTree: no visible global function definition for 'text'
    plotTree.blcTree : f: no visible global function definition for 'lines'
    plotTree.blcTree : f: no visible global function definition for
     'points'
    plotTree.blcTree : f: no visible global function definition for 'text'
    plotTree.glcTree: no visible global function definition for 'plot'
    plotTree.glcTree: no visible global function definition for 'points'
    plotTree.glcTree: no visible global function definition for 'text'
    plotTree.glcTree : f: no visible global function definition for 'lines'
    plotTree.glcTree : f: no visible global function definition for
     'points'
    plotTree.glcTree : f: no visible global function definition for 'text'
    Undefined global functions or variables:
     abline axis colorRampPalette cutree dbeta dist dnorm glm hclust image
     lines optim pchisq plot points quantile quasibinomial rect runif sd
     text var
Flavor: r-devel-windows-ix86+x86_64