CRAN Package Check Results for Package RPMM

Last updated on 2015-08-02 05:48:00.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.20 0.96 15.59 16.55 NOTE
r-devel-linux-x86_64-debian-gcc 1.20 0.87 15.65 16.52 NOTE
r-devel-linux-x86_64-fedora-clang 1.20 32.09 NOTE
r-devel-linux-x86_64-fedora-gcc 1.20 30.11 NOTE
r-devel-osx-x86_64-clang 1.20 29.02 NOTE
r-devel-windows-ix86+x86_64 1.20 5.00 29.00 34.00 NOTE
r-patched-linux-x86_64 1.20 1.34 15.56 16.90 NOTE
r-patched-solaris-sparc 1.20 214.00 NOTE
r-patched-solaris-x86 1.20 43.60 NOTE
r-release-linux-x86_64 1.20 0.90 15.74 16.64 NOTE
r-release-osx-x86_64-mavericks 1.20 OK
r-release-windows-ix86+x86_64 1.20 5.00 46.00 51.00 OK
r-oldrel-windows-ix86+x86_64 1.20 5.00 31.00 36.00 OK

Check Details

Version: 1.20
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.blcTree plot.glcTree predict.blcTree predict.glcTree
     print.blcTree print.glcTree
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.20
Check: R code for possible problems
Result: NOTE
    betaEst: no visible global function definition for ‘optim’
    betaEstMultiple: no visible global function definition for ‘dbeta’
    betaObjf: no visible global function definition for ‘dbeta’
    blc: no visible global function definition for ‘dbeta’
    blcInitializeSplitDichotomizeUsingMean : <anonymous>: no visible global
     function definition for ‘quantile’
    blcInitializeSplitEigen : <anonymous>: no visible binding for global
     variable ‘sd’
    blcInitializeSplitEigen : <anonymous>: no visible global function
     definition for ‘var’
    blcInitializeSplitFanny : <anonymous>: no visible global function
     definition for ‘runif’
    blcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘hclust’
    blcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘dist’
    blcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘cutree’
    blcSplit: no visible global function definition for ‘dbeta’
    blcSplitCriterionLRT: no visible global function definition for
     ‘pchisq’
    blcTreeOverallBIC : f1: no visible global function definition for
     ‘dbeta’
    gaussEstMultiple: no visible global function definition for ‘dnorm’
    glc: no visible global function definition for ‘dnorm’
    glcInitializeSplitEigen : <anonymous>: no visible global function
     definition for ‘var’
    glcInitializeSplitFanny : <anonymous>: no visible global function
     definition for ‘runif’
    glcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘hclust’
    glcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘dist’
    glcInitializeSplitHClust : <anonymous>: no visible global function
     definition for ‘cutree’
    glcSplit: no visible global function definition for ‘dnorm’
    glcSplitCriterionLRT: no visible global function definition for
     ‘pchisq’
    glcTreeOverallBIC : f1: no visible global function definition for
     ‘dnorm’
    glmLC: no visible global function definition for ‘quasibinomial’
    glmLC: no visible global function definition for ‘glm’
    llikeRPMMObject: no visible global function definition for ‘dbeta’
    llikeRPMMObject: no visible global function definition for ‘dnorm’
    plotImage.blcTree: no visible global function definition for
     ‘colorRampPalette’
    plotImage.blcTree: no visible global function definition for ‘hclust’
    plotImage.blcTree: no visible global function definition for ‘dist’
    plotImage.blcTree: no visible global function definition for ‘image’
    plotImage.blcTree: no visible global function definition for ‘rect’
    plotImage.blcTree: no visible global function definition for ‘abline’
    plotImage.blcTree: no visible global function definition for ‘axis’
    plotImage.glcTree: no visible global function definition for
     ‘colorRampPalette’
    plotImage.glcTree: no visible global function definition for ‘hclust’
    plotImage.glcTree: no visible global function definition for ‘dist’
    plotImage.glcTree: no visible global function definition for ‘image’
    plotImage.glcTree: no visible global function definition for ‘rect’
    plotImage.glcTree: no visible global function definition for ‘abline’
    plotImage.glcTree: no visible global function definition for ‘axis’
    plotTree.blcTree: no visible global function definition for ‘plot’
    plotTree.blcTree: no visible global function definition for ‘points’
    plotTree.blcTree: no visible global function definition for ‘text’
    plotTree.blcTree : f: no visible global function definition for ‘lines’
    plotTree.blcTree : f: no visible global function definition for
     ‘points’
    plotTree.blcTree : f: no visible global function definition for ‘text’
    plotTree.glcTree: no visible global function definition for ‘plot’
    plotTree.glcTree: no visible global function definition for ‘points’
    plotTree.glcTree: no visible global function definition for ‘text’
    plotTree.glcTree : f: no visible global function definition for ‘lines’
    plotTree.glcTree : f: no visible global function definition for
     ‘points’
    plotTree.glcTree : f: no visible global function definition for ‘text’
    Undefined global functions or variables:
     abline axis colorRampPalette cutree dbeta dist dnorm glm hclust image
     lines optim pchisq plot points quantile quasibinomial rect runif sd
     text var
    Consider adding
     importFrom("grDevices", "colorRampPalette")
     importFrom("graphics", "abline", "axis", "image", "lines", "plot",
     "points", "rect", "text")
     importFrom("stats", "cutree", "dbeta", "dist", "dnorm", "glm",
     "hclust", "optim", "pchisq", "quantile", "quasibinomial",
     "runif", "sd", "var")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64