CRAN Package Check Results for Package RbioRXN

Last updated on 2014-07-30 09:47:56.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3 7.87 88.34 96.21 OK
r-devel-linux-x86_64-debian-gcc 1.3 10.02 86.24 96.25 OK
r-devel-linux-x86_64-fedora-clang 1.3 112.46 OK
r-devel-linux-x86_64-fedora-gcc 1.3.1 122.50 OK
r-devel-osx-x86_64-clang 1.3 108.09 OK
r-devel-windows-ix86+x86_64 1.3 19.00 136.00 155.00 OK
r-patched-linux-x86_64 1.3 6.40 75.43 81.83 OK
r-patched-solaris-sparc 1.3 905.60 OK
r-patched-solaris-x86 1.3 231.10 OK
r-release-linux-ix86 1.3 7.66 88.98 96.64 OK
r-release-linux-x86_64 1.3 6.52 136.90 143.42 ERROR
r-release-osx-x86_64-mavericks 1.3 ERROR
r-release-osx-x86_64-snowleopard 1.3 ERROR
r-release-windows-ix86+x86_64 1.3 17.00 123.00 140.00 OK
r-oldrel-windows-ix86+x86_64 1.3 22.00 112.00 134.00 OK

Check Details

Version: 1.3
Check: examples
Result: ERROR
    Running examples in RbioRXN-Ex.R failed
    The error most likely occurred in:
    
    > ### Name: parse.metacyc.compound
    > ### Title: Parse MetaCyc compound data (compounds.dat in attribute-value
    > ### format)
    > ### Aliases: parse.metacyc.compound
    > ### Keywords: MetaCyc
    >
    > ### ** Examples
    >
    > url = 'http://bioinformatics.ai.sri.com/ptools/flatfile-samples/compounds.dat'
    > tmpdest = tempfile(pattern = "compounds")
    > download.file(url, destfile=tmpdest)
    trying URL 'http://bioinformatics.ai.sri.com/ptools/flatfile-samples/compounds.dat'
    Warning in download.file(url, destfile = tmpdest) :
     cannot open: HTTP status was '0 (null)'
    Error in download.file(url, destfile = tmpdest) :
     cannot open URL 'http://bioinformatics.ai.sri.com/ptools/flatfile-samples/compounds.dat'
    Execution halted
Flavor: r-release-linux-x86_64

Version: 1.3
Check: package dependencies
Result: ERROR
    Packages required but not available: fmcsR KEGGREST
    
    See the information on DESCRIPTION files in the chapter Creating R
    packages of the Writing R Extensions manual.
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard