CRAN Package Check Results for Package RobLoxBioC

Last updated on 2017-05-27 05:54:42.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9 13.73 142.04 155.78 NOTE
r-devel-linux-x86_64-debian-gcc 0.9 13.55 136.80 150.35 NOTE
r-devel-linux-x86_64-fedora-clang 0.9 271.68 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9 261.20 NOTE
r-devel-windows-ix86+x86_64 0.9 30.00 207.00 237.00 NOTE
r-patched-linux-x86_64 0.9 14.71 144.82 159.53 NOTE
r-patched-solaris-sparc 0.9 1542.00 NOTE
r-patched-solaris-x86 0.9 336.80 NOTE
r-release-linux-x86_64 0.9 13.42 139.10 152.52 NOTE
r-release-windows-ix86+x86_64 0.9 31.00 202.00 233.00 NOTE
r-release-osx-x86_64 0.9 ERROR
r-oldrel-windows-ix86+x86_64 0.9 48.00 188.00 236.00 NOTE
r-oldrel-osx-x86_64 0.9 NOTE

Check Details

Version: 0.9
Check: R code for possible problems
Result: NOTE
    AffySimStudy: no visible global function definition for ‘curve’
    AffySimStudy: no visible binding for global variable ‘pnorm’
    AffySimStudy : fun: no visible global function definition for ‘pnorm’
    AffySimStudy: no visible global function definition for ‘legend’
    AffySimStudy: no visible global function definition for ‘rbinom’
    AffySimStudy: no visible global function definition for ‘rnorm’
    AffySimStudy: no visible global function definition for ‘dev.new’
    AffySimStudy: no visible global function definition for ‘qnorm’
    AffySimStudy: no visible global function definition for ‘estimate’
    AffySimStudy: no visible global function definition for ‘layout’
    AffySimStudy: no visible global function definition for ‘abline’
    AffySimStudy: no visible global function definition for ‘par’
    IlluminaSimStudy: no visible global function definition for ‘curve’
    IlluminaSimStudy: no visible binding for global variable ‘pnorm’
    IlluminaSimStudy : fun: no visible global function definition for
     ‘pnorm’
    IlluminaSimStudy: no visible global function definition for ‘legend’
    IlluminaSimStudy: no visible global function definition for ‘rbinom’
    IlluminaSimStudy: no visible global function definition for ‘rnorm’
    IlluminaSimStudy: no visible global function definition for ‘dev.new’
    IlluminaSimStudy: no visible global function definition for ‘qnorm’
    IlluminaSimStudy: no visible global function definition for ‘estimate’
    IlluminaSimStudy: no visible global function definition for ‘layout’
    IlluminaSimStudy: no visible global function definition for ‘abline’
    IlluminaSimStudy: no visible global function definition for ‘par’
    KolmogorovMinDist,BeadLevelList-AbscontDistribution: no visible global
     function definition for ‘arrayNames’
    KolmogorovMinDist,BeadLevelList-AbscontDistribution: no visible global
     function definition for ‘getArrayData’
    KolmogorovMinDist,matrix-Norm : ksdist: no visible global function
     definition for ‘pnorm’
    KolmogorovMinDist,matrix-Norm: no visible global function definition
     for ‘qnorm’
    KolmogorovMinDist,matrix-Norm: no visible global function definition
     for ‘optim’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘mappedkeys’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘revmap’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘packageDescription’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘featureData<-’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘phenoData<-’
    robloxbioc,matrix: no visible global function definition for ‘qnorm’
    robloxbioc,matrix: no visible global function definition for ‘uniroot’
    Undefined global functions or variables:
     abline arrayNames curve dev.new estimate featureData<- getArrayData
     layout legend mappedkeys optim packageDescription par phenoData<-
     pnorm qnorm rbinom revmap rnorm uniroot
    Consider adding
     importFrom("grDevices", "dev.new")
     importFrom("graphics", "abline", "curve", "layout", "legend", "par")
     importFrom("stats", "optim", "pnorm", "qnorm", "rbinom", "rnorm",
     "uniroot")
     importFrom("utils", "packageDescription")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.9
Check: package dependencies
Result: ERROR
    Package required but not available: ‘beadarray’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Version: 0.9
Check: R code for possible problems
Result: NOTE
    .getA1.locsc: no visible global function definition for ‘approx’
    .getA2.locsc: no visible global function definition for ‘approx’
    .geta.locsc: no visible global function definition for ‘approx’
    .getb.locsc: no visible global function definition for ‘approx’
    AffySimStudy: no visible global function definition for ‘curve’
    AffySimStudy: no visible binding for global variable ‘pnorm’
    AffySimStudy : fun: no visible global function definition for ‘pnorm’
    AffySimStudy: no visible global function definition for ‘legend’
    AffySimStudy: no visible global function definition for ‘rbinom’
    AffySimStudy: no visible global function definition for ‘rnorm’
    AffySimStudy: no visible global function definition for ‘dev.new’
    AffySimStudy: no visible global function definition for ‘qnorm’
    AffySimStudy: no visible global function definition for ‘estimate’
    AffySimStudy: no visible global function definition for ‘layout’
    AffySimStudy: no visible global function definition for ‘abline’
    AffySimStudy: no visible global function definition for ‘par’
    IlluminaSimStudy: no visible global function definition for ‘curve’
    IlluminaSimStudy: no visible binding for global variable ‘pnorm’
    IlluminaSimStudy : fun: no visible global function definition for
     ‘pnorm’
    IlluminaSimStudy: no visible global function definition for ‘legend’
    IlluminaSimStudy: no visible global function definition for ‘rbinom’
    IlluminaSimStudy: no visible global function definition for ‘rnorm’
    IlluminaSimStudy: no visible global function definition for ‘dev.new’
    IlluminaSimStudy: no visible global function definition for ‘qnorm’
    IlluminaSimStudy: no visible global function definition for ‘estimate’
    IlluminaSimStudy: no visible global function definition for ‘layout’
    IlluminaSimStudy: no visible global function definition for ‘abline’
    IlluminaSimStudy: no visible global function definition for ‘par’
    KolmogorovMinDist,BeadLevelList-AbscontDistribution: no visible global
     function definition for ‘arrayNames’
    KolmogorovMinDist,BeadLevelList-AbscontDistribution: no visible global
     function definition for ‘getArrayData’
    KolmogorovMinDist,matrix-Norm : ksdist: no visible global function
     definition for ‘pnorm’
    KolmogorovMinDist,matrix-Norm: no visible global function definition
     for ‘qnorm’
    KolmogorovMinDist,matrix-Norm: no visible global function definition
     for ‘optim’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘mappedkeys’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘revmap’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘packageDescription’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘featureData<-’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘phenoData<-’
    robloxbioc,matrix: no visible global function definition for ‘qnorm’
    robloxbioc,matrix: no visible global function definition for ‘uniroot’
    Undefined global functions or variables:
     abline approx arrayNames curve dev.new estimate featureData<-
     getArrayData layout legend mappedkeys optim packageDescription par
     phenoData<- pnorm qnorm rbinom revmap rnorm uniroot
    Consider adding
     importFrom("grDevices", "dev.new")
     importFrom("graphics", "abline", "curve", "layout", "legend", "par")
     importFrom("stats", "approx", "optim", "pnorm", "qnorm", "rbinom",
     "rnorm", "uniroot")
     importFrom("utils", "packageDescription")
    to your NAMESPACE file.
Flavor: r-oldrel-osx-x86_64