CRAN Package Check Results for Package RobLoxBioC

Last updated on 2016-02-07 17:49:59.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-gcc 0.9 10.27 107.06 117.34 NOTE
r-devel-linux-x86_64-fedora-clang 0.9 246.23 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9 238.46 NOTE
r-devel-osx-x86_64-clang 0.9 260.68 NOTE
r-devel-windows-ix86+x86_64 0.9 23.00 251.00 274.00 WARN
r-patched-linux-x86_64 0.9 11.77 121.06 132.83 NOTE
r-patched-solaris-sparc 0.9 1614.30 NOTE
r-patched-solaris-x86 0.9 330.70 NOTE
r-release-linux-x86_64 0.9 12.03 123.23 135.26 NOTE
r-release-osx-x86_64-mavericks 0.9 ERROR
r-release-windows-ix86+x86_64 0.9 40.00 203.00 243.00 NOTE
r-oldrel-windows-ix86+x86_64 0.9 71.00 302.00 373.00 NOTE

Check Details

Version: 0.9
Check: R code for possible problems
Result: NOTE
    .getA1.locsc: no visible global function definition for ‘approx’
    .getA2.locsc: no visible global function definition for ‘approx’
    .geta.locsc: no visible global function definition for ‘approx’
    .getb.locsc: no visible global function definition for ‘approx’
    AffySimStudy: no visible global function definition for ‘curve’
    AffySimStudy: no visible binding for global variable ‘pnorm’
    AffySimStudy : fun: no visible global function definition for ‘pnorm’
    AffySimStudy: no visible global function definition for ‘legend’
    AffySimStudy: no visible global function definition for ‘rbinom’
    AffySimStudy: no visible global function definition for ‘rnorm’
    AffySimStudy: no visible global function definition for ‘dev.new’
    AffySimStudy: no visible global function definition for ‘qnorm’
    AffySimStudy: no visible global function definition for ‘estimate’
    AffySimStudy: no visible global function definition for ‘layout’
    AffySimStudy: no visible global function definition for ‘abline’
    AffySimStudy: no visible global function definition for ‘par’
    IlluminaSimStudy: no visible global function definition for ‘curve’
    IlluminaSimStudy: no visible binding for global variable ‘pnorm’
    IlluminaSimStudy : fun: no visible global function definition for
     ‘pnorm’
    IlluminaSimStudy: no visible global function definition for ‘legend’
    IlluminaSimStudy: no visible global function definition for ‘rbinom’
    IlluminaSimStudy: no visible global function definition for ‘rnorm’
    IlluminaSimStudy: no visible global function definition for ‘dev.new’
    IlluminaSimStudy: no visible global function definition for ‘qnorm’
    IlluminaSimStudy: no visible global function definition for ‘estimate’
    IlluminaSimStudy: no visible global function definition for ‘layout’
    IlluminaSimStudy: no visible global function definition for ‘abline’
    IlluminaSimStudy: no visible global function definition for ‘par’
    KolmogorovMinDist,BeadLevelList-AbscontDistribution: no visible global
     function definition for ‘arrayNames’
    KolmogorovMinDist,BeadLevelList-AbscontDistribution: no visible global
     function definition for ‘getArrayData’
    KolmogorovMinDist,matrix-Norm : ksdist: no visible global function
     definition for ‘pnorm’
    KolmogorovMinDist,matrix-Norm: no visible global function definition
     for ‘qnorm’
    KolmogorovMinDist,matrix-Norm: no visible global function definition
     for ‘optim’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘mappedkeys’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘revmap’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘packageDescription’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘featureData<-’
    robloxbioc,beadLevelData: no visible global function definition for
     ‘phenoData<-’
    robloxbioc,matrix: no visible global function definition for ‘qnorm’
    robloxbioc,matrix: no visible global function definition for ‘uniroot’
    Undefined global functions or variables:
     abline approx arrayNames curve dev.new estimate featureData<-
     getArrayData layout legend mappedkeys optim packageDescription par
     phenoData<- pnorm qnorm rbinom revmap rnorm uniroot
    Consider adding
     importFrom("grDevices", "dev.new")
     importFrom("graphics", "abline", "curve", "layout", "legend", "par")
     importFrom("stats", "approx", "optim", "pnorm", "qnorm", "rbinom",
     "rnorm", "uniroot")
     importFrom("utils", "packageDescription")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 0.9
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: multiple methods tables found for 'as.vector'
     Warning: multiple methods tables found for 'relistToClass'
Flavor: r-devel-windows-ix86+x86_64

Version: 0.9
Check: R code for possible problems
Result: NOTE
    robloxbioc,beadLevelData : .local: warning in
     packageDescription(annoPkg, field = "Version"): partial argument
     match of ‘field’ to ‘fields’
    AffySimStudy: no visible global function definition for ‘estimate’
    IlluminaSimStudy: no visible global function definition for ‘estimate’
    KolmogorovMinDist,BeadLevelList-AbscontDistribution : .local: no
     visible global function definition for ‘arrayNames’
    KolmogorovMinDist,BeadLevelList-AbscontDistribution : .local: no
     visible global function definition for ‘getArrayData’
    robloxbioc,beadLevelData : .local: no visible global function
     definition for ‘mappedkeys’
    robloxbioc,beadLevelData : .local: no visible global function
     definition for ‘revmap’
    robloxbioc,beadLevelData : .local: no visible global function
     definition for ‘featureData<-’
    robloxbioc,beadLevelData : .local: no visible global function
     definition for ‘phenoData<-’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.9
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-release-osx-x86_64-mavericks