CRAN Package Check Results for Package SVMMaj

Last updated on 2015-07-06 03:48:05.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2-2 1.59 23.58 25.16 NOTE
r-devel-linux-x86_64-debian-gcc 0.2-2 1.43 22.90 24.33 NOTE
r-devel-linux-x86_64-fedora-clang 0.2-2 48.07 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2-2 46.11 NOTE
r-devel-osx-x86_64-clang 0.2-2 40.75 NOTE
r-devel-windows-ix86+x86_64 0.2-2 6.00 41.00 47.00 NOTE
r-patched-linux-x86_64 0.2-2 1.42 24.41 25.83 NOTE
r-patched-solaris-sparc 0.2-2 414.80 NOTE
r-patched-solaris-x86 0.2-2 73.20 NOTE
r-release-linux-x86_64 0.2-2 1.45 23.91 25.36 NOTE
r-release-osx-x86_64-mavericks 0.2-2 NOTE
r-release-windows-ix86+x86_64 0.2-2 7.00 56.00 63.00 NOTE
r-oldrel-windows-ix86+x86_64 0.2-2 9.00 46.00 55.00 NOTE

Check Details

Version: 0.2-2
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘MASS’ ‘graphics’ ‘methods’ ‘stats’
     All declared Imports should be used.
    Package in Depends field not imported from: ‘kernlab’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2-2
Check: R code for possible problems
Result: NOTE
    roccurve: warning in formatC(sum(c1 * cumsum(c2)), digit = 4): partial
     argument match of ‘digit’ to ‘digits’
    svmmajtuning: warning in .svmmaj(Z[groups != i, ], y[groups != i],
     lambda = lambda[l], w = w[groups != i], increase.step =
     increase.step, hinge = newHinge, theta = theta, check.positive =
     FALSE, convergence = convergence, ...): partial argument match of
     ‘hinge’ to ‘hingef’
    .svmmaj: no visible global function definition for ‘update’
    auc: no visible global function definition for ‘error’
    getUpdate: no visible global function definition for ‘vanilladot’
    getUpdate: no visible global function definition for ‘kernelMatrix’
    isb: no visible global function definition for ‘quantile’
    normalize: no visible global function definition for ‘sd’
    plot.hinge: no visible global function definition for ‘plot’
    plot.hinge: no visible global function definition for ‘lines’
    plot.hinge: no visible global function definition for ‘points’
    plot.svmmaj: no visible global function definition for ‘density’
    plot.svmmaj: no visible global function definition for ‘bw.nrd0’
    plot.svmmaj: no visible global function definition for ‘plot’
    plot.svmmaj: no visible global function definition for ‘title’
    plot.svmmaj: no visible global function definition for ‘lines’
    plot.svmmaj: no visible global function definition for ‘par’
    plot.svmmaj: no visible global function definition for ‘legend’
    plotWeights: no visible global function definition for ‘layout’
    plotWeights: no visible global function definition for ‘par’
    plotWeights: no visible global function definition for ‘barplot’
    plotWeights: no visible global function definition for ‘plot’
    plotWeights: no visible global function definition for ‘title’
    plotWeights: no visible global function definition for ‘lines’
    plotWeights: no visible global function definition for ‘legend’
    predict.svmmaj: no visible global function definition for ‘plot’
    predict.svmmaj: no visible global function definition for ‘density’
    predict.transDat: no visible global function definition for
     ‘model.matrix’
    qhat.theta: no visible global function definition for ‘kernelMatrix’
    roccurve: no visible global function definition for ‘error’
    roccurve: no visible global function definition for ‘plot’
    roccurve: no visible global function definition for ‘lines’
    svmmaj.default: no visible binding for global variable ‘vanilladot’
    svmmaj.default: no visible binding for global variable ‘na.omit’
    svmmaj.default: no visible global function definition for ‘kpar’
    svmmaj.default: no visible global function definition for ‘update’
    svmmaj2.default: no visible binding for global variable ‘vanilladot’
    svmmaj2.default: no visible binding for global variable ‘na.omit’
    svmmaj2.default: no visible global function definition for ‘kpar’
    svmmajcrossval : <anonymous>: no visible global function definition for
     ‘update’
    svmmajtuning: no visible binding for global variable ‘vanilladot’
    svmmajtuning: no visible binding for global variable ‘na.omit’
    transformdata: no visible global function definition for ‘model.matrix’
    Undefined global functions or variables:
     barplot bw.nrd0 density error kernelMatrix kpar layout legend lines
     model.matrix na.omit par plot points quantile sd title update
     vanilladot
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.2-2
Check: Rd line widths
Result: NOTE
    Rd file 'svmmajcrossval.Rd':
     \usage lines wider than 90 characters:
     svmmajcrossval(X,y,search.grid=list(lambda=2^seq(5,-5,length.out=19)),...,convergence=1e-4,
     weights.obs=1, check.positive = TRUE, print.progress=FALSE, ngroup = 5, groups = NULL)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.2-2
Check: R code for possible problems
Result: NOTE
    roccurve: warning in formatC(sum(c1 * cumsum(c2)), digit = 4): partial
     argument match of 'digit' to 'digits'
    svmmajtuning: warning in .svmmaj(Z[groups != i, ], y[groups != i],
     lambda = lambda[l], w = w[groups != i], increase.step =
     increase.step, hinge = newHinge, theta = theta, check.positive =
     FALSE, convergence = convergence, ...): partial argument match of
     'hinge' to 'hingef'
    auc: no visible global function definition for ‘error’
    getUpdate: no visible global function definition for ‘vanilladot’
    getUpdate: no visible global function definition for ‘kernelMatrix’
    qhat.theta: no visible global function definition for ‘kernelMatrix’
    roccurve: no visible global function definition for ‘error’
    svmmaj.default: no visible binding for global variable ‘vanilladot’
    svmmaj.default: no visible global function definition for ‘kpar’
    svmmaj2.default: no visible binding for global variable ‘vanilladot’
    svmmaj2.default: no visible global function definition for ‘kpar’
    svmmajtuning: no visible binding for global variable ‘vanilladot’
    Undefined global functions or variables:
     error kernelMatrix kpar vanilladot
Flavor: r-devel-osx-x86_64-clang

Version: 0.2-2
Check: R code for possible problems
Result: NOTE
    roccurve: warning in formatC(sum(c1 * cumsum(c2)), digit = 4): partial
     argument match of ‘digit’ to ‘digits’
    svmmajtuning: warning in .svmmaj(Z[groups != i, ], y[groups != i],
     lambda = lambda[l], w = w[groups != i], increase.step =
     increase.step, hinge = newHinge, theta = theta, check.positive =
     FALSE, convergence = convergence, ...): partial argument match of
     ‘hinge’ to ‘hingef’
    auc: no visible global function definition for ‘error’
    getUpdate: no visible global function definition for ‘vanilladot’
    getUpdate: no visible global function definition for ‘kernelMatrix’
    qhat.theta: no visible global function definition for ‘kernelMatrix’
    roccurve: no visible global function definition for ‘error’
    svmmaj.default: no visible binding for global variable ‘vanilladot’
    svmmaj.default: no visible global function definition for ‘kpar’
    svmmaj2.default: no visible binding for global variable ‘vanilladot’
    svmmaj2.default: no visible global function definition for ‘kpar’
    svmmajtuning: no visible binding for global variable ‘vanilladot’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64