CRAN Package Check Results for Package SvyNom

Last updated on 2014-04-20 11:47:04.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 0.54 15.43 15.97 OK
r-devel-linux-x86_64-debian-gcc 1.0 0.60 14.90 15.50 OK
r-devel-linux-x86_64-fedora-clang 1.0 31.80 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 30.28 NOTE
r-devel-macosx-x86_64-clang 1.0 29.45 OK
r-devel-macosx-x86_64-gcc 1.0 ERROR
r-devel-windows-ix86+x86_64 1.0 2.00 23.00 25.00 OK
r-patched-linux-x86_64 1.0 0.54 15.19 15.73 OK
r-patched-solaris-sparc 1.0 181.80 OK
r-patched-solaris-x86 1.0 45.80 OK
r-release-linux-ix86 OK
r-release-linux-x86_64 1.0 0.55 15.24 15.79 OK
r-release-windows-ix86+x86_64 1.0 3.00 26.00 29.00 OK
r-oldrel-windows-ix86+x86_64 1.0 2.00 24.00 26.00 OK

Check Details

Version: 1.0
Check: Rd line widths
Result: NOTE
    Rd file 'svycox.calibrate.Rd':
     \examples lines wider than 100 characters:
     mynom=svycox.nomogram(.design=dstr2, .model=Surv(survival,surv_cens)~ECOG+liver_only+Alb+Hb+Age+Differentiation+Gt_1_m1site+lymph_only, ... [TRUNCATED]
    
    Rd file 'svycox.nomogram.Rd':
     \examples lines wider than 100 characters:
     mynom=svycox.nomogram(.design=dstr2, .model=Surv(survival,surv_cens)~ECOG+liver_only+Alb+Hb+Age+Differentiation+Gt_1_m1site+lymph_only, ... [TRUNCATED]
    
    Rd file 'svycox.validate.Rd':
     \examples lines wider than 100 characters:
     mynom=svycox.nomogram(.design=dstr2, .model=Surv(survival,surv_cens)~ECOG+liver_only+Alb+Hb+Age+Differentiation+Gt_1_m1site+lymph_only, ... [TRUNCATED]
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘rms’ ‘survey’
Flavor: r-devel-macosx-x86_64-gcc

Version: 1.0
Check: R code for possible problems
Result: NOTE
    svycox.calibrate: no visible global function definition for ‘svykm’
    svycox.nomogram: no visible global function definition for ‘svycoxph’
    svycox.nomogram: no visible global function definition for ‘ols’
    svycox.nomogram: no visible global function definition for ‘nomogram’
    svycox.validate : internal.validate.func: no visible global function
     definition for ‘svydesign’
    svycox.validate : internal.validate.func: no visible global function
     definition for ‘svycoxph’
    svycox.validate : internal.validate.func: no visible global function
     definition for ‘rcorr.cens’
Flavor: r-devel-macosx-x86_64-gcc

Version: 1.0
Check: examples
Result: ERROR
    Running examples in ‘SvyNom-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: svycox.calibrate
    > ### Title: Checking the calibration of a nomogram for a survey-weighted Cox
    > ### model
    > ### Aliases: svycox.calibrate
    > ### Keywords: survival survey nomogram
    >
    > ### ** Examples
    >
    > library(survival)
    Loading required package: splines
    > library(survey)
    Error in library(survey) : there is no package called ‘survey’
    Execution halted
Flavor: r-devel-macosx-x86_64-gcc