CRAN Package Check Results for Package TIMP

Last updated on 2015-09-02 14:48:08.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.12.1 3.69 79.17 82.86 WARN
r-devel-linux-x86_64-debian-gcc 1.12.1 3.71 77.64 81.35 WARN
r-devel-linux-x86_64-fedora-clang 1.12.1 154.84 WARN
r-devel-linux-x86_64-fedora-gcc 1.12.1 148.71 WARN
r-devel-osx-x86_64-clang 1.12.1 134.85 WARN
r-devel-windows-ix86+x86_64 1.12.1 22.00 174.00 196.00 WARN
r-patched-linux-x86_64 1.12.1 4.03 81.68 85.71 WARN
r-patched-solaris-sparc 1.12.1 1009.30 WARN
r-patched-solaris-x86 1.12.1 226.40 WARN
r-release-linux-x86_64 1.12.1 3.98 80.76 84.74 WARN
r-release-osx-x86_64-mavericks 1.12.1 OK
r-release-windows-ix86+x86_64 1.12.1 18.00 167.00 185.00 WARN
r-oldrel-windows-ix86+x86_64 1.12.1 29.00 301.00 330.00 WARN

Check Details

Version: 1.12.1
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: replacing previous import by ‘deSolve::matplot’ when loading ‘TIMP’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.12.1
Check: R code for possible problems
Result: NOTE
    barplot3: no visible global function definition for ‘heat.colors’
    calcAniSignal: no visible global function definition for ‘write.table’
    compCoh: no visible global function definition for ‘dnorm’
    displayEst: no visible global function definition for ‘dev.interactive’
    divergeZimage: no visible global function definition for ‘pdf’
    divergeZimage: no visible global function definition for ‘dev.off’
    doubleDiff: no visible global function definition for ‘write.table’
    efit2file: no visible global function definition for ‘write.table’
    fillResult: no visible global function definition for ‘coef’
    fitModel: no visible global function definition for ‘capture.output’
    fitModel: no visible global function definition for ‘nls’
    fitModel: no visible global function definition for ‘nls.control’
    fitModel: no visible global function definition for ‘optim’
    getC: no visible global function definition for ‘write.table’
    getCLP: no visible global function definition for ‘write.table’
    getCLPList: no visible global function definition for ‘write.table’
    getDAS: no visible global function definition for ‘write.table’
    getLightDiff: no visible global function definition for ‘tail’
    getResidRet: no visible global function definition for ‘coef’
    getStdErrClp: no visible global function definition for ‘numericDeriv’
    getTraces: no visible global function definition for ‘write.table’
    getX: no visible global function definition for ‘write.table’
    getXList: no visible global function definition for ‘write.table’
    matlinlogplot: no visible global function definition for ‘xy.coords’
    outlierCorr: no visible global function definition for ‘IQR’
    outlierCorr: no visible global function definition for ‘quantile’
    plotClp: no visible global function definition for ‘dev.cur’
    plotClp: no visible global function definition for ‘dev.new’
    plotClp: no visible global function definition for ‘write.table’
    plotClp: no visible global function definition for ‘predict’
    plotClp: no visible global function definition for ‘dev.interactive’
    plotClp: no visible binding for global variable ‘pdf’
    plotClp: no visible binding for global variable ‘postscript’
    plotClp: no visible global function definition for ‘dev.print’
    plotFLIM: no visible global function definition for ‘dev.cur’
    plotFLIM: no visible global function definition for ‘dev.new’
    plotFLIM: no visible global function definition for ‘write.table’
    plotFLIM: no visible global function definition for ‘dev.interactive’
    plotFLIM: no visible binding for global variable ‘pdf’
    plotFLIM: no visible binding for global variable ‘postscript’
    plotFLIM: no visible global function definition for ‘dev.print’
    plotFLIMresid: no visible global function definition for ‘dev.cur’
    plotFLIMresid: no visible global function definition for ‘dev.new’
    plotFLIMresid: no visible global function definition for
     ‘dev.interactive’
    plotFLIMresid: no visible binding for global variable ‘pdf’
    plotFLIMresid: no visible binding for global variable ‘postscript’
    plotFLIMresid: no visible global function definition for ‘dev.print’
    plotIntenImage: no visible global function definition for ‘gray’
    plotKinBreakDown: no visible global function definition for ‘dev.cur’
    plotKinBreakDown: no visible global function definition for ‘dev.new’
    plotKinBreakDown: no visible global function definition for ‘na.omit’
    plotKinBreakDown: no visible global function definition for
     ‘dev.interactive’
    plotKinBreakDown: no visible binding for global variable ‘pdf’
    plotKinBreakDown: no visible binding for global variable ‘postscript’
    plotKinBreakDown: no visible global function definition for ‘dev.print’
    plotKinSpecEst: no visible global function definition for ‘dev.cur’
    plotKinSpecEst: no visible global function definition for ‘dev.new’
    plotKinSpecEst: no visible global function definition for
     ‘dev.interactive’
    plotKinSpecEst: no visible binding for global variable ‘pdf’
    plotKinSpecEst: no visible binding for global variable ‘postscript’
    plotKinSpecEst: no visible global function definition for ‘dev.print’
    plotMassSpec: no visible global function definition for ‘dev.cur’
    plotMassSpec: no visible global function definition for ‘dev.new’
    plotMassSpec: no visible global function definition for ‘write.table’
    plotMassSpec: no visible global function definition for
     ‘dev.interactive’
    plotMassSpec: no visible binding for global variable ‘pdf’
    plotMassSpec: no visible binding for global variable ‘postscript’
    plotMassSpec: no visible global function definition for ‘dev.print’
    plotResids: no visible global function definition for ‘dev.cur’
    plotResids: no visible global function definition for ‘dev.new’
    plotResids: no visible global function definition for ‘dev.interactive’
    plotResids: no visible binding for global variable ‘pdf’
    plotResids: no visible binding for global variable ‘postscript’
    plotResids: no visible global function definition for ‘dev.print’
    plotSelIntenImage: no visible global function definition for ‘gray’
    plotSpecKin: no visible global function definition for ‘write.table’
    plotSpecKin: no visible global function definition for ‘predict’
    plotSpecKin: no visible global function definition for
     ‘dev.interactive’
    plotSpecKin: no visible binding for global variable ‘pdf’
    plotSpecKin: no visible binding for global variable ‘postscript’
    plotSpecKin: no visible global function definition for ‘dev.print’
    plotSpectraSuper: no visible global function definition for ‘dev.cur’
    plotSpectraSuper: no visible global function definition for ‘dev.new’
    plotSpectraSuper: no visible global function definition for ‘n2mfrow’
    plotSpectraSuper: no visible global function definition for
     ‘dev.interactive’
    plotSpectraSuper: no visible binding for global variable ‘pdf’
    plotSpectraSuper: no visible binding for global variable ‘postscript’
    plotSpectraSuper: no visible global function definition for ‘dev.print’
    plotTracesResids: no visible global function definition for ‘dev.cur’
    plotTracesResids: no visible global function definition for ‘dev.new’
    plotTracesResids: no visible global function definition for ‘n2mfrow’
    plotTracesResids: no visible global function definition for
     ‘dev.interactive’
    plotTracesResids: no visible binding for global variable ‘pdf’
    plotTracesResids: no visible binding for global variable ‘postscript’
    plotTracesResids: no visible global function definition for ‘dev.print’
    plotTracesSuper: no visible global function definition for ‘dev.cur’
    plotTracesSuper: no visible global function definition for ‘dev.new’
    plotTracesSuper: no visible global function definition for ‘n2mfrow’
    plotTracesSuper: no visible global function definition for
     ‘dev.interactive’
    plotTracesSuper: no visible binding for global variable ‘pdf’
    plotTracesSuper: no visible binding for global variable ‘postscript’
    plotTracesSuper: no visible global function definition for ‘dev.print’
    plotTri: no visible global function definition for ‘dev.cur’
    plotTri: no visible global function definition for ‘dev.new’
    print.summary.timp.nls: no visible global function definition for
     ‘printCoefmat’
    print.summary.timp.nls: no visible global function definition for
     ‘symnum’
    print.summary.timp.nls: no visible global function definition for
     ‘naprint’
    print.summary.timp.nls.lm: no visible global function definition for
     ‘printCoefmat’
    print.summary.timp.optim: no visible global function definition for
     ‘printCoefmat’
    print.timp.nls: no visible global function definition for ‘formula’
    readData: no visible global function definition for ‘read.table’
    readData: no visible global function definition for ‘na.omit’
    readclp0: no visible global function definition for ‘read.table’
    simndecay_gen: no visible global function definition for ‘rnorm’
    sumKinSpecEst: no visible global function definition for ‘dev.cur’
    sumKinSpecEst: no visible global function definition for ‘dev.new’
    sumKinSpecEst: no visible global function definition for
     ‘dev.interactive’
    sumKinSpecEst: no visible global function definition for ‘dev.print’
    sumKinSpecEst: no visible binding for global variable ‘postscript’
    summary.timp.nls: no visible global function definition for ‘coef’
    summary.timp.nls: no visible global function definition for ‘deviance’
    summary.timp.nls: no visible global function definition for ‘pt’
    summary.timp.nls: no visible global function definition for ‘formula’
    summary.timp.nls.lm: no visible global function definition for ‘coef’
    summary.timp.nls.lm: no visible global function definition for
     ‘deviance’
    summary.timp.nls.lm: no visible global function definition for ‘pt’
    summary.timp.optim: no visible global function definition for ‘pt’
    weightSM: no visible global function definition for ‘approxfun’
    writeAverage: no visible global function definition for ‘read.table’
    writeAverage: no visible global function definition for ‘write.table’
    writeData: no visible global function definition for ‘write.table’
    writeFit: no visible global function definition for ‘write.table’
    plotter,kin: no visible global function definition for ‘dev.cur’
    plotter,kin: no visible global function definition for ‘dev.new’
    plotter,kin: no visible global function definition for ‘write.table’
    plotter,kin: no visible global function definition for
     ‘dev.interactive’
    plotter,kin: no visible binding for global variable ‘pdf’
    plotter,kin: no visible binding for global variable ‘postscript’
    plotter,kin: no visible global function definition for ‘dev.print’
    plotter,mass: no visible global function definition for ‘dev.cur’
    plotter,mass: no visible global function definition for ‘dev.new’
    plotter,mass: no visible global function definition for ‘write.table’
    plotter,mass: no visible global function definition for
     ‘dev.interactive’
    plotter,mass: no visible binding for global variable ‘pdf’
    plotter,mass: no visible binding for global variable ‘postscript’
    plotter,mass: no visible global function definition for ‘dev.print’
    plotter,spec: no visible global function definition for ‘dev.cur’
    plotter,spec: no visible global function definition for ‘dev.new’
    plotter,spec: no visible global function definition for
     ‘dev.interactive’
    plotter,spec: no visible binding for global variable ‘pdf’
    plotter,spec: no visible binding for global variable ‘postscript’
    plotter,spec: no visible global function definition for ‘dev.print’
    Undefined global functions or variables:
     IQR approxfun capture.output coef dev.cur dev.interactive dev.new
     dev.off dev.print deviance dnorm formula gray heat.colors n2mfrow
     na.omit naprint nls nls.control numericDeriv optim pdf postscript
     predict printCoefmat pt quantile read.table rnorm symnum tail
     write.table xy.coords
    Consider adding
     importFrom("grDevices", "dev.cur", "dev.interactive", "dev.new",
     "dev.off", "dev.print", "gray", "heat.colors", "n2mfrow",
     "pdf", "postscript", "xy.coords")
     importFrom("stats", "IQR", "approxfun", "coef", "deviance", "dnorm",
     "formula", "na.omit", "naprint", "nls", "nls.control",
     "numericDeriv", "optim", "predict", "printCoefmat", "pt",
     "quantile", "rnorm", "symnum")
     importFrom("utils", "capture.output", "read.table", "tail",
     "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64