CRAN Package Check Results for Package TPmsm

Last updated on 2015-09-01 10:51:15.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.0 5.01 20.27 25.28 NOTE
r-devel-linux-x86_64-debian-gcc 1.2.0 6.75 19.01 25.76 NOTE
r-devel-linux-x86_64-fedora-clang 1.2.0 47.14 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2.0 51.50 NOTE
r-devel-osx-x86_64-clang 1.2.0 38.20 NOTE
r-devel-windows-ix86+x86_64 1.2.0 74.00 64.00 138.00 NOTE
r-patched-linux-x86_64 1.2.0 6.79 19.09 25.88 NOTE
r-patched-solaris-sparc 1.2.0 227.30 ERROR
r-patched-solaris-x86 1.2.0 97.20 NOTE
r-release-linux-x86_64 1.2.0 6.83 20.77 27.60 NOTE
r-release-osx-x86_64-mavericks 1.2.0 NOTE
r-release-windows-ix86+x86_64 1.2.0 62.00 43.00 105.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2.0 64.00 50.00 114.00 OK

Check Details

Version: 1.2.0
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 1.2.0
Check: R code for possible problems
Result: NOTE
    contour.TPCmsm: no visible global function definition for ‘grey’
    image.TPCmsm: no visible global function definition for ‘lcm’
    image.TPCmsm: no visible global function definition for ‘grey’
    image.TPCmsm: no visible global function definition for ‘plot.window’
    image.TPCmsm: no visible global function definition for ‘rect’
    image.TPCmsm: no visible global function definition for ‘axis’
    image.TPCmsm: no visible global function definition for ‘box’
    Undefined global functions or variables:
     axis box grey lcm plot.window rect
    Consider adding
     importFrom("grDevices", "grey")
     importFrom("graphics", "axis", "box", "lcm", "plot.window", "rect")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.2.0
Check: examples
Result: ERROR
    Running examples in ‘TPmsm-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: image.TPCmsm
    > ### Title: image method for a TPCmsm object
    > ### Aliases: image.TPCmsm
    > ### Keywords: hplot methods multivariate survival
    >
    > ### ** Examples
    >
    > # Set the number of threads
    > nth <- setThreadsTP(2)
    >
    > # Create survTP object
    > data(heartTP)
    > heartTP_obj <- with( heartTP, survTP(time1, event1, Stime, event, age=age) )
    >
    > # Compute LIN conditional transition probabilities with confidence band
    > TPCmsm_obj <- transLIN(heartTP_obj, s=57, t=310, x=0, conf=TRUE, n.boot=100,
    + method.boot="basic")
    
     *** caught segfault ***
    address 0, cause 'memory not mapped'
    
    Traceback:
     1: .Call(Rf_BtoTPCmsm, lst, UT, UX, s, t, x, statenames, as.integer(nboot), conflevel, methodboot, PACKAGE = "TPmsm")
     2: BtoTPCmsm(lst, UT, UX, s, t, xi, state.names, n.boot, conf.level, method.boot)
     3: TransBoot.TPC(object, s, t, state.names, n.boot, conf.level, method.boot, xi, ...)
     4: TransBoot(object, s, t, state.names, n.boot, conf.level, method.boot, xi, ...)
     5: TransMethod.TPC(object, s, t, state.names, conf, n.boot, conf.level, method.boot, xi = x, bw = bw, window = window, methodweights = method.weights, ...)
     6: TransMethod(object, s, t, state.names, conf, n.boot, conf.level, method.boot, xi = x, bw = bw, window = window, methodweights = method.weights, ...)
     7: transLIN(heartTP_obj, s = 57, t = 310, x = 0, conf = TRUE, n.boot = 100, method.boot = "basic")
    aborting ...
Flavor: r-patched-solaris-sparc