CRAN Package Check Results for Package WGCNA

Last updated on 2014-10-31 19:48:07.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.41-1 6.92 97.36 104.28 NOTE
r-devel-linux-x86_64-debian-gcc 1.41-1 7.93 95.96 103.89 NOTE
r-devel-linux-x86_64-fedora-clang 1.41-1 206.20 NOTE
r-devel-linux-x86_64-fedora-gcc 1.41-1 191.76 NOTE
r-devel-osx-x86_64-clang 1.41-1 175.14 NOTE
r-devel-windows-ix86+x86_64 1.41-1 28.00 174.00 202.00 NOTE
r-patched-linux-x86_64 1.41-1 7.78 100.97 108.74 NOTE
r-patched-solaris-sparc 1.41-1 1191.60 NOTE
r-patched-solaris-x86 1.41-1 253.10 NOTE
r-release-linux-ix86 1.41-1 10.56 126.51 137.07 OK
r-release-linux-x86_64 1.41-1 7.95 108.34 116.29 OK
r-release-osx-x86_64-mavericks 1.41-1 NOTE
r-release-osx-x86_64-snowleopard 1.41-1 NOTE
r-release-windows-ix86+x86_64 1.41-1 27.00 194.00 221.00 OK
r-oldrel-windows-ix86+x86_64 1.41-1 28.00 192.00 220.00 NOTE

Check Details

Version: 1.41-1
Check: R code for possible problems
Result: NOTE
    .devianceResidual: no visible global function definition for ‘coxph’
    .equalizeQuantiles: no visible global function definition for
     ‘rowMedians’
    GOenrichmentAnalysis: no visible global function definition for
     ‘mappedkeys’
    GOenrichmentAnalysis: no visible binding for global variable ‘GOID’
    GOenrichmentAnalysis: no visible binding for global variable ‘Ontology’
    disableWGCNAThreads: no visible global function definition for
     ‘stopCluster’
    standardScreeningCensoredTime: no visible global function definition
     for ‘coxph’
    standardScreeningCensoredTime: no visible global function definition
     for ‘Surv’
    votingLinearPredictor: no visible global function definition for
     ‘is.Surv’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86

Version: 1.41-1
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘org.Mm.eg.db’ ‘minet’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 1.41-1
Check: R code for possible problems
Result: NOTE
    Error : .onLoad failed in loadNamespace() for 'GO.db', details:
     call: match.arg(synchronous, c("off", "normal", "full"))
     error: 'arg' must be NULL or a character vector
    Error : .onLoad failed in loadNamespace() for 'org.Hs.eg.db', details:
     call: match.arg(synchronous, c("off", "normal", "full"))
     error: 'arg' must be NULL or a character vector
    Error : .onLoad failed in loadNamespace() for 'org.Mm.eg.db', details:
     call: match.arg(synchronous, c("off", "normal", "full"))
     error: 'arg' must be NULL or a character vector
Flavor: r-oldrel-windows-ix86+x86_64