CRAN Package Check Results for Package WMCapacity

Last updated on 2015-07-07 03:48:04.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9.6.6 4.09 42.42 46.51 NOTE
r-devel-linux-x86_64-debian-gcc 0.9.6.6 4.52 41.66 46.18 NOTE
r-devel-linux-x86_64-fedora-clang 0.9.6.6 95.72 NOTE
r-devel-linux-x86_64-fedora-gcc 0.9.6.6 85.25 NOTE
r-devel-osx-x86_64-clang 0.9.6.6 77.68 NOTE
r-devel-windows-ix86+x86_64 0.9.6.6 25.00 129.00 154.00 NOTE
r-patched-linux-x86_64 0.9.6.6 4.58 41.55 46.13 NOTE
r-patched-solaris-sparc 0.9.6.6 583.40 NOTE
r-patched-solaris-x86 0.9.6.6 141.20 NOTE
r-release-linux-x86_64 0.9.6.6 4.74 41.50 46.25 NOTE
r-release-osx-x86_64-mavericks 0.9.6.6 NOTE
r-release-windows-ix86+x86_64 0.9.6.6 21.00 88.00 109.00 NOTE
r-oldrel-windows-ix86+x86_64 0.9.6.6 30.00 120.00 150.00 NOTE

Check Details

Version: 0.9.6.6
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘cairoDevice’ ‘coda’ ‘gWidgets’ ‘gWidgetsRGtk2’ ‘gtools’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.9.6.6
Check: R code for possible problems
Result: NOTE
    .selected_diagnostic_parameter_type: warning in gtkAdjustmentNew(value
     = 1, lower = 1, upper = maxPar, step.inc = 1): partial argument match
     of ‘step.inc’ to ‘step.incr’
    .selected_diagnostics_model_row: warning in gtkAdjustmentNew(value = 1,
     lower = 1, upper = maxPar, step.inc = 1): partial argument match of
     ‘step.inc’ to ‘step.incr’
    .womCopyModelInfo: warning in ls(env = wommbatAnalysis): partial
     argument match of ‘env’ to ‘envir’
    .womCopyModelInfo: warning in ls(env = project): partial argument match
     of ‘env’ to ‘envir’
    .womGetDataFrame: warning in eval(parse(text = name), env =
     globalenv()): partial argument match of ‘env’ to ‘envir’
    .womGetDataFrameList: warning in ls(env = envir): partial argument
     match of ‘env’ to ‘envir’
    .womGetDataFrameList : <anonymous>: warning in eval(parse(text =
     paste("is.data.frame(", x, ")", sep = "")), env = globalenv()):
     partial argument match of ‘env’ to ‘envir’
    .womLoadProject: warning in
     .womSetDataForColumnSelection(wommbatAnalysis$data, rem = FALSE,
     filename = projectFile): partial argument match of ‘rem’ to
     ‘removeModels’
    .womLoadProjectFile: warning in load(projectFile, env = myNewEnv):
     partial argument match of ‘env’ to ‘envir’
    wommbatGUI: warning in gtkAdjustmentNew(value = 1, lower = 1, upper =
     1, step.inc = 1): partial argument match of ‘step.inc’ to ‘step.incr’
    .clicked_menu_help: no visible global function definition for
     ‘browseURL’
    .womAnalyzeOneModel: no visible global function definition for ‘optim’
    .womCheckAnalysisSettings: no visible global function definition for
     ‘gmessage’
    .womCheckAnalysisSettings: no visible global function definition for
     ‘guiToolkit’
    .womCheckModelSettings: no visible global function definition for
     ‘gmessage’
    .womCheckModelSettings: no visible global function definition for
     ‘guiToolkit’
    .womClearDiagnosticPlots: no visible global function definition for
     ‘plot.new’
    .womClearInterfaceForDataLoad: no visible global function definition
     for ‘plot.new’
    .womCreateModelChainFiles: no visible global function definition for
     ‘write.csv’
    .womCreateModelFiles: no visible global function definition for
     ‘gmessage’
    .womCreateModelFiles: no visible global function definition for
     ‘guiToolkit’
    .womCreateModelFiles: no visible global function definition for
     ‘write.csv’
    .womCreateModelSummaryFile: no visible global function definition for
     ‘gmessage’
    .womCreateModelSummaryFile: no visible global function definition for
     ‘guiToolkit’
    .womCreateMultiComp: no visible global function definition for ‘sd’
    .womCreateSummaryFile: no visible global function definition for
     ‘gmessage’
    .womCreateSummaryFile: no visible global function definition for
     ‘guiToolkit’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘quantile’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘asCairoDevice’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘par’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘plot’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘density’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘abline’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘axis’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘box’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘acf’
    .womExportAnalysis: no visible global function definition for
     ‘gmessage’
    .womExportAnalysis: no visible global function definition for
     ‘guiToolkit’
    .womExportAnalysis: no visible global function definition for
     ‘write.csv’
    .womFormatOutput: no visible global function definition for ‘mcmc’
    .womFormatOutput: no visible binding for global variable ‘cov2cor’
    .womFormatOutput: no visible binding for global variable ‘sd’
    .womFormatOutput: no visible binding for global variable
     ‘effectiveSize’
    .womFormatOutput: no visible binding for global variable ‘spectrum0.ar’
    .womListModels: no visible global function definition for
     ‘combinations’
    .womLoadProject: no visible global function definition for ‘gmessage’
    .womLoadProject: no visible global function definition for ‘guiToolkit’
    .womLoadProjectFile: no visible global function definition for
     ‘gmessage’
    .womLoadProjectFile: no visible global function definition for
     ‘guiToolkit’
    .womOpenCSVFile: no visible global function definition for ‘read.csv’
    .womOpenCSVFile: no visible global function definition for ‘gmessage’
    .womOpenCSVFile: no visible global function definition for ‘guiToolkit’
    .womSaveAnalysis: no visible global function definition for ‘gmessage’
    .womSaveAnalysis: no visible global function definition for
     ‘guiToolkit’
    .womSelectDataFrame: no visible global function definition for
     ‘gmessage’
    .womSelectDataFrame: no visible global function definition for
     ‘guiToolkit’
    .womSelectDataFrame: no visible global function definition for
     ‘gwindow’
    .womSelectDataFrame: no visible global function definition for ‘gtable’
    .womSelectDataFrame : <anonymous>: no visible global function
     definition for ‘svalue’
    .womSelectDataFrame : <anonymous>: no visible global function
     definition for ‘dispose’
    .womSetDataForColumnSelection: no visible global function definition
     for ‘gconfirm’
    .womSetDataForColumnSelection: no visible global function definition
     for ‘guiToolkit’
    .womSetDataForColumnSelection: no visible global function definition
     for ‘gmessage’
    .womStartAnalyses: no visible global function definition for ‘alarm’
    .womUpdateChainPlot: no visible global function definition for
     ‘quantile’
    .womUpdateChainPlot: no visible global function definition for
     ‘asCairoDevice’
    .womUpdateChainPlot: no visible global function definition for ‘par’
    .womUpdateChainPlot: no visible global function definition for ‘plot’
    .womUpdateChainPlot: no visible global function definition for ‘abline’
    .womUpdateChainPlot: no visible global function definition for ‘lines’
    .womUpdateChainPlot: no visible global function definition for ‘lowess’
    .womUpdateChainPlot: no visible global function definition for ‘axis’
    .womUpdateChainPlot: no visible global function definition for ‘box’
    .wom_clicked_data_apply: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_apply: no visible global function definition for
     ‘guiToolkit’
    .wom_clicked_data_change: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_change: no visible global function definition for
     ‘guiToolkit’
    .wom_clicked_data_response: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_response: no visible global function definition for
     ‘guiToolkit’
    .wom_clicked_data_setsize: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_setsize: no visible global function definition for
     ‘guiToolkit’
    fileChoose: no visible global function definition for ‘gfile’
    fileChoose: no visible global function definition for ‘guiToolkit’
    packageIsAvailable: no visible global function definition for
     ‘installed.packages’
    packageIsAvailable: no visible global function definition for
     ‘not.null’
    packageIsAvailable: no visible global function definition for
     ‘questionDialog’
    packageIsAvailable: no visible binding for global variable ‘crv’
    packageIsAvailable: no visible global function definition for
     ‘install.packages’
    Undefined global functions or variables:
     abline acf alarm asCairoDevice axis box browseURL combinations
     cov2cor crv density dispose effectiveSize gconfirm gfile gmessage
     gtable guiToolkit gwindow install.packages installed.packages lines
     lowess mcmc not.null optim par plot plot.new quantile questionDialog
     read.csv sd spectrum0.ar svalue write.csv
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 0.9.6.6
Check: Rd files
Result: NOTE
    prepare_Rd: wommbatNoGUI.Rd:29-30: Dropping empty section \examples
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.9.6.6
Check: Rd line widths
Result: NOTE
    Rd file 'wommbatGUI.Rd':
     \usage lines wider than 90 characters:
     wommbatGUI(project = NULL, projectFile= NULL, CSVfile = NULL, dataFrame = NULL, devel=FALSE)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.9.6.6
Check: R code for possible problems
Result: NOTE
    .selected_diagnostic_parameter_type: warning in gtkAdjustmentNew(value
     = 1, lower = 1, upper = maxPar, step.inc = 1): partial argument match
     of 'step.inc' to 'step.incr'
    .selected_diagnostics_model_row: warning in gtkAdjustmentNew(value = 1,
     lower = 1, upper = maxPar, step.inc = 1): partial argument match of
     'step.inc' to 'step.incr'
    .womCopyModelInfo: warning in ls(env = wommbatAnalysis): partial
     argument match of 'env' to 'envir'
    .womCopyModelInfo: warning in ls(env = project): partial argument match
     of 'env' to 'envir'
    .womGetDataFrame: warning in eval(parse(text = name), env =
     globalenv()): partial argument match of 'env' to 'envir'
    .womGetDataFrameList: warning in ls(env = envir): partial argument
     match of 'env' to 'envir'
    .womGetDataFrameList : <anonymous>: warning in eval(parse(text =
     paste("is.data.frame(", x, ")", sep = "")), env = globalenv()):
     partial argument match of 'env' to 'envir'
    .womLoadProject: warning in
     .womSetDataForColumnSelection(wommbatAnalysis$data, rem = FALSE,
     filename = projectFile): partial argument match of 'rem' to
     'removeModels'
    .womLoadProjectFile: warning in load(projectFile, env = myNewEnv):
     partial argument match of 'env' to 'envir'
    .womUpdateChainPlot: warning in axis(1, at = c(1, upperLimit - burnin),
     label = c(burnin + 1, upperLimit)): partial argument match of 'label'
     to 'labels'
    wommbatGUI: warning in gtkAdjustmentNew(value = 1, lower = 1, upper =
     1, step.inc = 1): partial argument match of 'step.inc' to 'step.incr'
    .womCheckAnalysisSettings: no visible global function definition for
     ‘gmessage’
    .womCheckAnalysisSettings: no visible global function definition for
     ‘guiToolkit’
    .womCheckModelSettings: no visible global function definition for
     ‘gmessage’
    .womCheckModelSettings: no visible global function definition for
     ‘guiToolkit’
    .womCreateModelFiles: no visible global function definition for
     ‘gmessage’
    .womCreateModelFiles: no visible global function definition for
     ‘guiToolkit’
    .womCreateModelSummaryFile: no visible global function definition for
     ‘gmessage’
    .womCreateModelSummaryFile: no visible global function definition for
     ‘guiToolkit’
    .womCreateSummaryFile: no visible global function definition for
     ‘gmessage’
    .womCreateSummaryFile: no visible global function definition for
     ‘guiToolkit’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘asCairoDevice’
    .womExportAnalysis: no visible global function definition for
     ‘gmessage’
    .womExportAnalysis: no visible global function definition for
     ‘guiToolkit’
    .womFormatOutput: no visible global function definition for ‘mcmc’
    .womFormatOutput: no visible binding for global variable
     ‘effectiveSize’
    .womFormatOutput: no visible binding for global variable ‘spectrum0.ar’
    .womListModels: no visible global function definition for
     ‘combinations’
    .womLoadProject: no visible global function definition for ‘gmessage’
    .womLoadProject: no visible global function definition for ‘guiToolkit’
    .womLoadProjectFile: no visible global function definition for
     ‘gmessage’
    .womLoadProjectFile: no visible global function definition for
     ‘guiToolkit’
    .womOpenCSVFile: no visible global function definition for ‘gmessage’
    .womOpenCSVFile: no visible global function definition for ‘guiToolkit’
    .womSaveAnalysis: no visible global function definition for ‘gmessage’
    .womSaveAnalysis: no visible global function definition for
     ‘guiToolkit’
    .womSelectDataFrame: no visible global function definition for
     ‘gmessage’
    .womSelectDataFrame: no visible global function definition for
     ‘guiToolkit’
    .womSelectDataFrame: no visible global function definition for
     ‘gwindow’
    .womSelectDataFrame: no visible global function definition for ‘gtable’
    .womSelectDataFrame : <anonymous>: no visible global function
     definition for ‘svalue’
    .womSelectDataFrame : <anonymous>: no visible global function
     definition for ‘dispose’
    .womSetDataForColumnSelection: no visible global function definition
     for ‘gconfirm’
    .womSetDataForColumnSelection: no visible global function definition
     for ‘guiToolkit’
    .womSetDataForColumnSelection: no visible global function definition
     for ‘gmessage’
    .womUpdateChainPlot: no visible global function definition for
     ‘asCairoDevice’
    .wom_clicked_data_apply: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_apply: no visible global function definition for
     ‘guiToolkit’
    .wom_clicked_data_change: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_change: no visible global function definition for
     ‘guiToolkit’
    .wom_clicked_data_response: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_response: no visible global function definition for
     ‘guiToolkit’
    .wom_clicked_data_setsize: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_setsize: no visible global function definition for
     ‘guiToolkit’
    fileChoose: no visible global function definition for ‘gfile’
    fileChoose: no visible global function definition for ‘guiToolkit’
    packageIsAvailable: no visible global function definition for
     ‘not.null’
    packageIsAvailable: no visible global function definition for
     ‘questionDialog’
    packageIsAvailable: no visible binding for global variable ‘crv’
    Undefined global functions or variables:
     asCairoDevice combinations crv dispose effectiveSize gconfirm gfile
     gmessage gtable guiToolkit gwindow mcmc not.null questionDialog
     spectrum0.ar svalue
Flavor: r-devel-osx-x86_64-clang

Version: 0.9.6.6
Check: R code for possible problems
Result: NOTE
    .selected_diagnostic_parameter_type: warning in gtkAdjustmentNew(value
     = 1, lower = 1, upper = maxPar, step.inc = 1): partial argument match
     of ‘step.inc’ to ‘step.incr’
    .selected_diagnostics_model_row: warning in gtkAdjustmentNew(value = 1,
     lower = 1, upper = maxPar, step.inc = 1): partial argument match of
     ‘step.inc’ to ‘step.incr’
    .womCopyModelInfo: warning in ls(env = wommbatAnalysis): partial
     argument match of ‘env’ to ‘envir’
    .womCopyModelInfo: warning in ls(env = project): partial argument match
     of ‘env’ to ‘envir’
    .womGetDataFrame: warning in eval(parse(text = name), env =
     globalenv()): partial argument match of ‘env’ to ‘envir’
    .womGetDataFrameList: warning in ls(env = envir): partial argument
     match of ‘env’ to ‘envir’
    .womGetDataFrameList : <anonymous>: warning in eval(parse(text =
     paste("is.data.frame(", x, ")", sep = "")), env = globalenv()):
     partial argument match of ‘env’ to ‘envir’
    .womLoadProject: warning in
     .womSetDataForColumnSelection(wommbatAnalysis$data, rem = FALSE,
     filename = projectFile): partial argument match of ‘rem’ to
     ‘removeModels’
    .womLoadProjectFile: warning in load(projectFile, env = myNewEnv):
     partial argument match of ‘env’ to ‘envir’
    .womUpdateChainPlot: warning in axis(1, at = c(1, upperLimit - burnin),
     label = c(burnin + 1, upperLimit)): partial argument match of ‘label’
     to ‘labels’
    wommbatGUI: warning in gtkAdjustmentNew(value = 1, lower = 1, upper =
     1, step.inc = 1): partial argument match of ‘step.inc’ to ‘step.incr’
    .womCheckAnalysisSettings: no visible global function definition for
     ‘gmessage’
    .womCheckAnalysisSettings: no visible global function definition for
     ‘guiToolkit’
    .womCheckModelSettings: no visible global function definition for
     ‘gmessage’
    .womCheckModelSettings: no visible global function definition for
     ‘guiToolkit’
    .womCreateModelFiles: no visible global function definition for
     ‘gmessage’
    .womCreateModelFiles: no visible global function definition for
     ‘guiToolkit’
    .womCreateModelSummaryFile: no visible global function definition for
     ‘gmessage’
    .womCreateModelSummaryFile: no visible global function definition for
     ‘guiToolkit’
    .womCreateSummaryFile: no visible global function definition for
     ‘gmessage’
    .womCreateSummaryFile: no visible global function definition for
     ‘guiToolkit’
    .womDisplayNthDiagnosticPlot: no visible global function definition for
     ‘asCairoDevice’
    .womExportAnalysis: no visible global function definition for
     ‘gmessage’
    .womExportAnalysis: no visible global function definition for
     ‘guiToolkit’
    .womFormatOutput: no visible global function definition for ‘mcmc’
    .womFormatOutput: no visible binding for global variable
     ‘effectiveSize’
    .womFormatOutput: no visible binding for global variable ‘spectrum0.ar’
    .womListModels: no visible global function definition for
     ‘combinations’
    .womLoadProject: no visible global function definition for ‘gmessage’
    .womLoadProject: no visible global function definition for ‘guiToolkit’
    .womLoadProjectFile: no visible global function definition for
     ‘gmessage’
    .womLoadProjectFile: no visible global function definition for
     ‘guiToolkit’
    .womOpenCSVFile: no visible global function definition for ‘gmessage’
    .womOpenCSVFile: no visible global function definition for ‘guiToolkit’
    .womSaveAnalysis: no visible global function definition for ‘gmessage’
    .womSaveAnalysis: no visible global function definition for
     ‘guiToolkit’
    .womSelectDataFrame: no visible global function definition for
     ‘gmessage’
    .womSelectDataFrame: no visible global function definition for
     ‘guiToolkit’
    .womSelectDataFrame: no visible global function definition for
     ‘gwindow’
    .womSelectDataFrame: no visible global function definition for ‘gtable’
    .womSelectDataFrame : <anonymous>: no visible global function
     definition for ‘svalue’
    .womSelectDataFrame : <anonymous>: no visible global function
     definition for ‘dispose’
    .womSetDataForColumnSelection: no visible global function definition
     for ‘gconfirm’
    .womSetDataForColumnSelection: no visible global function definition
     for ‘guiToolkit’
    .womSetDataForColumnSelection: no visible global function definition
     for ‘gmessage’
    .womUpdateChainPlot: no visible global function definition for
     ‘asCairoDevice’
    .wom_clicked_data_apply: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_apply: no visible global function definition for
     ‘guiToolkit’
    .wom_clicked_data_change: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_change: no visible global function definition for
     ‘guiToolkit’
    .wom_clicked_data_response: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_response: no visible global function definition for
     ‘guiToolkit’
    .wom_clicked_data_setsize: no visible global function definition for
     ‘gmessage’
    .wom_clicked_data_setsize: no visible global function definition for
     ‘guiToolkit’
    fileChoose: no visible global function definition for ‘gfile’
    fileChoose: no visible global function definition for ‘guiToolkit’
    packageIsAvailable: no visible global function definition for
     ‘not.null’
    packageIsAvailable: no visible global function definition for
     ‘questionDialog’
    packageIsAvailable: no visible binding for global variable ‘crv’
Flavors: r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64