CRAN Package Check Results for Package WeightedCluster

Last updated on 2017-04-28 05:49:01.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2 6.05 116.30 122.35 NOTE
r-devel-linux-x86_64-debian-gcc 1.2 5.93 118.56 124.49 NOTE
r-devel-linux-x86_64-fedora-clang 1.2 246.60 NOTE --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 1.2 243.92 NOTE --no-stop-on-test-error
r-devel-windows-ix86+x86_64 1.2 26.00 363.00 389.00 NOTE
r-patched-linux-x86_64 1.2 6.24 116.13 122.36 NOTE
r-patched-solaris-sparc 1.2 1901.10 NOTE
r-patched-solaris-x86 1.2 373.80 NOTE
r-release-linux-x86_64 1.2 5.43 117.69 123.12 NOTE
r-release-windows-ix86+x86_64 1.2 28.00 273.00 301.00 NOTE
r-release-osx-x86_64 1.2 WARN
r-oldrel-windows-ix86+x86_64 1.2 34.00 291.00 325.00 NOTE
r-oldrel-osx-x86_64 1.2 NOTE

Check Details

Version: 1.2
Check: R code for possible problems
Result: NOTE
    as.clustrange.default : <anonymous>: no visible global function
     definition for ‘var’
    as.clustrange.hclust: no visible global function definition for
     ‘cutree’
    as.seqtree.hclust: no visible global function definition for ‘cutree’
    crflegend: no visible global function definition for ‘par’
    crflegend: no visible global function definition for ‘plot’
    crflegend: no visible global function definition for ‘legend’
    normalize.values: no visible global function definition for ‘var’
    normalize.values: no visible global function definition for ‘median’
    plot.clustrange : getline: no visible global function definition for
     ‘median’
    plot.clustrange : <anonymous>: no visible global function definition
     for ‘qnorm’
    plot.clustrange : <anonymous>: no visible global function definition
     for ‘var’
    plot.clustrange : <anonymous>: no visible global function definition
     for ‘quantile’
    plot.clustrange: no visible global function definition for ‘plot’
    plot.clustrange: no visible global function definition for ‘lines’
    plot.clustrange: no visible global function definition for ‘polygon’
    plot.clustrange: no visible global function definition for
     ‘adjustcolor’
    plot.clustrange: no visible global function definition for ‘legend’
    plot.clustrangefamily: no visible global function definition for ‘par’
    plot.clustrangefamily: no visible global function definition for
     ‘layout’
    plot.clustrangefamily: no visible global function definition for ‘plot’
    plot.clustrangefamily: no visible global function definition for
     ‘lines’
    seqclustname: no visible global function definition for ‘xtabs’
    wcAggregateCasesInternal: no visible global function definition for
     ‘aggregate’
    wcClusterQualityInternal: no visible global function definition for
     ‘xtabs’
    wcCmpCluster: no visible global function definition for ‘as.dist’
    wcCmpCluster: no visible global function definition for ‘hclust’
    wcKMedoids: no visible global function definition for ‘cutree’
    wcSilhouetteObs: no visible global function definition for ‘xtabs’
    Undefined global functions or variables:
     adjustcolor aggregate as.dist cutree hclust layout legend lines
     median par plot polygon qnorm quantile var xtabs
    Consider adding
     importFrom("grDevices", "adjustcolor")
     importFrom("graphics", "layout", "legend", "lines", "par", "plot",
     "polygon")
     importFrom("stats", "aggregate", "as.dist", "cutree", "hclust",
     "median", "qnorm", "quantile", "var", "xtabs")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.2
Check: compiled code
Result: NOTE
    File ‘WeightedCluster/libs/WeightedCluster.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.2
Flags: --no-stop-on-test-error
Check: R code for possible problems
Result: NOTE
    as.clustrange.default : <anonymous>: no visible global function
     definition for ‘var’
    as.clustrange.hclust: no visible global function definition for
     ‘cutree’
    as.seqtree.hclust: no visible global function definition for ‘cutree’
    crflegend: no visible global function definition for ‘par’
    crflegend: no visible global function definition for ‘plot’
    crflegend: no visible global function definition for ‘legend’
    normalize.values: no visible global function definition for ‘var’
    normalize.values: no visible global function definition for ‘median’
    plot.clustrange : getline: no visible global function definition for
     ‘median’
    plot.clustrange : <anonymous>: no visible global function definition
     for ‘qnorm’
    plot.clustrange : <anonymous>: no visible global function definition
     for ‘var’
    plot.clustrange : <anonymous>: no visible global function definition
     for ‘quantile’
    plot.clustrange: no visible global function definition for ‘plot’
    plot.clustrange: no visible global function definition for ‘lines’
    plot.clustrange: no visible global function definition for ‘polygon’
    plot.clustrange: no visible global function definition for
     ‘adjustcolor’
    plot.clustrange: no visible global function definition for ‘legend’
    plot.clustrangefamily: no visible global function definition for ‘par’
    plot.clustrangefamily: no visible global function definition for
     ‘layout’
    plot.clustrangefamily: no visible global function definition for ‘plot’
    plot.clustrangefamily: no visible global function definition for
     ‘lines’
    seqclustname: no visible global function definition for ‘xtabs’
    wcAggregateCasesInternal: no visible global function definition for
     ‘aggregate’
    wcClusterQualityInternal: no visible global function definition for
     ‘xtabs’
    wcCmpCluster: no visible global function definition for ‘as.dist’
    wcCmpCluster: no visible global function definition for ‘hclust’
    wcKMedoids: no visible global function definition for ‘cutree’
    wcSilhouetteObs: no visible global function definition for ‘xtabs’
    Undefined global functions or variables:
     adjustcolor aggregate as.dist cutree hclust layout legend lines
     median par plot polygon qnorm quantile var xtabs
    Consider adding
     importFrom("grDevices", "adjustcolor")
     importFrom("graphics", "layout", "legend", "lines", "par", "plot",
     "polygon")
     importFrom("stats", "aggregate", "as.dist", "cutree", "hclust",
     "median", "qnorm", "quantile", "var", "xtabs")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.2
Flags: --no-stop-on-test-error
Check: compiled code
Result: NOTE
    File ‘WeightedCluster/libs/WeightedCluster.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
     6 training training training
     [>] sum of weights: 712 - min/max: 1/50
     [>] 490 sequences in the data set
     [>] min/max sequence length: 70/70
     [>] 490 sequences with 6 distinct events/states
     [>] 490 distinct sequences
     [>] min/max sequence length: 70/70
     [>] computing distances using HAM metric
     [>] total time: 0.208 secs
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'WeightedClusterPreview.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `subfigure.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    ! Emergency stop.
    <read *>
    
    l.78 \usepackage
     {afterpage}^^M
    ! ==> Fatal error occurred, no output PDF file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64