CRAN Package Check Results for Package aLFQ

Last updated on 2015-05-29 19:47:20.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3.2 5.16 69.55 74.71 OK
r-devel-linux-x86_64-debian-gcc 1.3.2 5.02 67.33 72.34 OK
r-devel-linux-x86_64-fedora-clang 1.3.2 161.12 OK
r-devel-linux-x86_64-fedora-gcc 1.3.2 147.57 OK
r-devel-osx-x86_64-clang 1.3.2 127.53 OK
r-devel-windows-ix86+x86_64 1.3.2 16.00 103.00 119.00 OK
r-patched-linux-x86_64 1.3.2 6.40 66.18 72.59 OK
r-patched-solaris-sparc 1.3.2 957.70 ERROR
r-patched-solaris-x86 1.3.2 210.10 OK
r-release-linux-x86_64 1.3.2 4.92 66.90 71.82 OK
r-release-osx-x86_64-mavericks 1.3.2 OK
r-release-osx-x86_64-snowleopard 1.3.2 ERROR
r-release-windows-ix86+x86_64 1.3.2 16.00 104.00 120.00 OK
r-oldrel-windows-ix86+x86_64 1.3.2 31.00 181.00 212.00 OK

Check Details

Version: 1.3.2
Check: tests
Result: ERROR
    Running the tests in ‘tests/units.R’ failed.
    Last 13 lines of output:
     Mean relative difference: 0.5925926
    
     I. Failure(@test_ProteinInference.R#152): PeptideInference: topx selection criterion
     PeptideInference(transition_data, transition_topx = 1, transition_strictness = "loose", transition_summary = "sum", consensus_proteins = TRUE, consensus_transitions = FALSE)$peptide_intensity not equal to c(60, 100, 95, 55, 95, 55)
     Mean relative difference: 0.516129
    
     J. Failure(@test_ProteinInference.R#156): PeptideInference: loose / strict selection criterion
     PeptideInference(transition_data, transition_topx = 3, transition_strictness = "loose", transition_summary = "sum", consensus_proteins = TRUE, consensus_transitions = FALSE)$peptide_intensity not equal to c(100, 180, 170, 90, 170, 90)
     Mean relative difference: 0.5925926
    
     Error: Test failures
     In addition: There were 31 warnings (use warnings() to see them)
     Execution halted
Flavor: r-patched-solaris-sparc

Version: 1.3.2
Check: package dependencies
Result: ERROR
    Package required but not available: ‘protiq’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64-snowleopard