CRAN Package Check Results for Package aLFQ

Last updated on 2016-12-02 18:47:24.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3.3 4.94 69.24 74.18 OK
r-devel-linux-x86_64-debian-gcc 1.3.3 4.83 69.43 74.27 ERROR
r-devel-linux-x86_64-fedora-clang 1.3.3 170.83 OK
r-devel-linux-x86_64-fedora-gcc 1.3.3 169.13 OK --no-stop-on-test-error
r-devel-macos-x86_64-clang 1.3.3 122.86 NOTE
r-devel-windows-ix86+x86_64 1.3.3 16.00 107.00 123.00 OK
r-patched-linux-x86_64 1.3.3 5.10 63.00 68.10 OK
r-patched-solaris-sparc 1.3.3 853.80 OK
r-patched-solaris-x86 1.3.3 180.70 OK
r-release-linux-x86_64 1.3.3 5.16 62.16 67.32 OK
r-release-osx-x86_64-mavericks 1.3.3 OK
r-release-windows-ix86+x86_64 1.3.3 23.00 152.00 175.00 OK
r-oldrel-windows-ix86+x86_64 1.3.3 22.00 152.00 174.00 OK

Check Details

Version: 1.3.3
Check: tests
Result: ERROR
    Running the tests in ‘tests/units.R’ failed.
    Last 13 lines of output:
     3: expect_equal(x, expected, ..., expected.label = label)
     4: compare(object, expected, ...)
     5: protein_inference.ProteinInference(peptide_data, peptide_method = "all", peptide_summary = "median",
     fasta = NA, apex_model = NA, combine_precursors = FALSE, consensus_peptides = FALSE)
     6: data.dt[, list(response = median(peptide_intensity)), by = key(data.dt)]
     7: `[.data.table`(data.dt, , list(response = median(peptide_intensity)), by = key(data.dt))
     8: eval(jsub, thisEnv)
     9: eval(jsub, thisEnv)
     10: gmedian(peptide_intensity)
    
     DONE ===========================================================================
     Error: Test failures
     In addition: Warning message:
     Placing tests in `inst/tests/` is deprecated. Please use `tests/testthat/` instead
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.3.3
Check: R code for possible problems
Result: NOTE
    
    This data.table install has not detected OpenMP support. It will work but slower in single threaded mode.
Flavor: r-devel-macos-x86_64-clang