CRAN Package Check Results for Package ade4TkGUI

Last updated on 2014-04-25 05:47:11.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2-6 1.14 38.14 39.28 NOTE
r-devel-linux-x86_64-debian-gcc 0.2-6 1.08 37.95 39.03 NOTE
r-devel-linux-x86_64-fedora-clang 0.2-6 64.70 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2-6 66.80 NOTE
r-devel-osx-x86_64-clang 0.2-6 62.30 NOTE
r-devel-osx-x86_64-gcc 0.2-6 NOTE
r-devel-windows-ix86+x86_64 0.2-6 3.00 39.00 42.00 NOTE
r-patched-linux-x86_64 0.2-6 1.09 39.00 40.09 NOTE
r-patched-solaris-sparc 0.2-6 395.80 NOTE
r-patched-solaris-x86 0.2-6 102.40 NOTE
r-release-linux-ix86 0.2-6 2.00 63.00 65.00 NOTE
r-release-linux-x86_64 0.2-6 1.04 26.69 27.73 NOTE
r-release-osx-x86_64-mavericks 0.2-6 WARN
r-release-windows-ix86+x86_64 0.2-6 3.00 42.00 45.00 NOTE
r-oldrel-windows-ix86+x86_64 0.2-6 4.00 41.00 45.00 NOTE

Check Details

Version: 0.2-6
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls to packages already attached by Depends:
     ‘ade4’ ‘tcltk’
     Please remove these calls from your code.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-osx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2-6
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘newGr’
    Found the platform-specific devices:
     ‘quartz’ ‘windows’ ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    ordiClust : doCutk: no visible global function definition for ‘between’
    ordiClust : doCutk: no visible global function definition for
     ‘randtest.between’
    ordiClust : doCuth: no visible global function definition for ‘between’
    ordiClust : doCuth: no visible global function definition for
     ‘randtest.between’
    ordiClust : doTest: no visible global function definition for ‘between’
    ordiClust : doTest: no visible global function definition for
     ‘randtest.between’
    ordiClust : doDraw: no visible global function definition for ‘between’
    ordiClust : f: no visible global function definition for ‘between’
    ordiClust : f: no visible global function definition for
     ‘randtest.between’
    ordiClust : keyup: no visible global function definition for ‘between’
    ordiClust : keyup: no visible global function definition for
     ‘randtest.between’
    ordiClust : keydown: no visible global function definition for
     ‘between’
    ordiClust : keydown: no visible global function definition for
     ‘randtest.between’
    
    Found the following assignments to the global environment:
    File ‘ade4TkGUI/R/ade4TkGUI.R’:
     assign("cmdlist", "cmdlist", envir = .GlobalEnv)
     assign("winlist", 1, envir = .GlobalEnv)
    File ‘ade4TkGUI/R/choose.R’:
     assign("winlist", get("winlist", envir = .GlobalEnv) + 1, envir = .GlobalEnv)
     assign("cmdlist", "cmdlist", envir = .GlobalEnv)
    File ‘ade4TkGUI/R/dialog.MCTests.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(randtestname), myObject, pos = 1)
    File ‘ade4TkGUI/R/dialog.between.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.cca.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiout), myObject, pos = 1)
    File ‘ade4TkGUI/R/dialog.coinertia.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiout), myObject, pos = 1)
    File ‘ade4TkGUI/R/dialog.discrimin.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dpcoa.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dudi.acm.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dudi.coa.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dudi.dec.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dudi.display.R’:
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
    File ‘ade4TkGUI/R/dialog.dudi.fca.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dudi.fpca.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dudi.mix.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dudi.nsc.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dudi.pca.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.dudi.pco.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/dialog.pcaiv.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiout), myObject, pos = 1)
    File ‘ade4TkGUI/R/dialog.pcaivortho.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiout), myObject, pos = 1)
    File ‘ade4TkGUI/R/dialog.s.arrow.R’:
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
    File ‘ade4TkGUI/R/dialog.s.chull.R’:
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
    File ‘ade4TkGUI/R/dialog.s.class.R’:
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
    File ‘ade4TkGUI/R/dialog.s.label.R’:
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
    File ‘ade4TkGUI/R/dialog.s.match.R’:
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
    File ‘ade4TkGUI/R/dialog.s.value.R’:
     assign("cmdlist", c(get("cmdlist", envir = .GlobalEnv), cmd),
     envir = .GlobalEnv)
    File ‘ade4TkGUI/R/dialog.within.R’:
     assign("ade4TkGUIFlag", 1, envir = .GlobalEnv)
     assign(eval(dudiname), mydudi, pos = 1)
    File ‘ade4TkGUI/R/ordiClust.R’:
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.factor", ordiClust.factor, globalenv())
     assign("ordiClust.factor", ordiClust.factor, globalenv())
     assign("ordiClust.factor", ordiClust.factor, globalenv())
     assign("ordiClust.factor", ordiClust.factor, globalenv())
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.factor", ordiClust.factor, globalenv())
     assign("ordiClust.dudi", ordiClust.dudi, globalenv())
     assign("ordiClust.factor", ordiClust.factor, globalenv())
     assign("ordiClust.factor", ordiClust.factor, globalenv())
    
    Found the following calls to data() loading into the global environment:
    File ‘ade4TkGUI/R/choose.R’:
     data(list = choix)
    See section ‘Good practice’ in ‘?data’.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-osx-x86_64-clang, r-patched-linux-x86_64, r-release-linux-ix86, r-release-linux-x86_64

Version: 0.2-6
Check: R code for possible problems
Result: NOTE
    Found an obsolete/platform-specific call in the following function:
     ‘newGr’
    Found the platform-specific devices:
     ‘quartz’ ‘windows’ ‘x11’
    dev.new() is the preferred way to open a new device, in the unlikely
    event one is needed.
    ordiClust : doCutk: no visible global function definition for ‘between’
    ordiClust : doCutk: no visible global function definition for
     ‘randtest.between’
    ordiClust : doCuth: no visible global function definition for ‘between’
    ordiClust : doCuth: no visible global function definition for
     ‘randtest.between’
    ordiClust : doTest: no visible global function definition for ‘between’
    ordiClust : doTest: no visible global function definition for
     ‘randtest.between’
    ordiClust : doDraw: no visible global function definition for ‘between’
    ordiClust : f: no visible global function definition for ‘between’
    ordiClust : f: no visible global function definition for
     ‘randtest.between’
    ordiClust : keyup: no visible global function definition for ‘between’
    ordiClust : keyup: no visible global function definition for
     ‘randtest.between’
    ordiClust : keydown: no visible global function definition for
     ‘between’
    ordiClust : keydown: no visible global function definition for
     ‘randtest.between’
Flavors: r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-sparc, r-patched-solaris-x86

Version: 0.2-6
Check: R code for possible problems
Result: NOTE
    ordiClust : doCutk: no visible global function definition for ‘between’
    ordiClust : doCutk: no visible global function definition for
     ‘randtest.between’
    ordiClust : doCuth: no visible global function definition for ‘between’
    ordiClust : doCuth: no visible global function definition for
     ‘randtest.between’
    ordiClust : doTest: no visible global function definition for ‘between’
    ordiClust : doTest: no visible global function definition for
     ‘randtest.between’
    ordiClust : doDraw: no visible global function definition for ‘between’
    ordiClust : f: no visible global function definition for ‘between’
    ordiClust : f: no visible global function definition for
     ‘randtest.between’
    ordiClust : keyup: no visible global function definition for ‘between’
    ordiClust : keyup: no visible global function definition for
     ‘randtest.between’
    ordiClust : keydown: no visible global function definition for
     ‘between’
    ordiClust : keydown: no visible global function definition for
     ‘randtest.between’
Flavors: r-devel-osx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2-6
Check: PDF version of manual
Result: WARNING
    LaTeX errors when creating PDF version.
    This typically indicates Rd problems.
    LaTeX errors found:
    ! LaTeX Error: File `upquote.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    0d751c7/Rd2.tex:8: ==> Fatal error occurred, no output PDF file produced!
Flavor: r-release-osx-x86_64-mavericks