CRAN Package Check Results for Package aftgee

Last updated on 2017-10-18 23:47:35.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0-0 3.60 36.24 39.83 NOTE
r-devel-linux-x86_64-debian-gcc 1.0-0 3.93 40.56 44.49 NOTE
r-devel-linux-x86_64-fedora-clang 1.0-0 90.88 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0-0 88.99 NOTE
r-devel-windows-ix86+x86_64 1.0-0 11.00 77.00 88.00 NOTE
r-patched-linux-x86_64 1.0-0 3.44 36.17 39.61 NOTE
r-patched-solaris-x86 1.0-0 120.40 NOTE
r-release-linux-x86_64 1.0-0 3.52 36.63 40.15 NOTE
r-release-windows-ix86+x86_64 1.0-0 18.00 107.00 125.00 NOTE
r-release-osx-x86_64 1.0-0 ERROR
r-oldrel-windows-ix86+x86_64 1.0-0 14.00 111.00 125.00 NOTE
r-oldrel-osx-x86_64 1.0-0 NOTE

Check Details

Version: 1.0-0
Check: R code for possible problems
Result: NOTE
    aftgee: no visible global function definition for ‘model.extract’
    aftgee: no visible global function definition for ‘model.matrix’
    aftgee: no visible global function definition for ‘lm’
    aftgee: no visible global function definition for ‘vcov’
    aftgee.fit: no visible global function definition for ‘lm’
    aftgee.fit: no visible global function definition for ‘rexp’
    aftgee.fit: no visible global function definition for ‘var’
    aftsrr: no visible global function definition for ‘model.extract’
    aftsrr: no visible global function definition for ‘model.matrix’
    aftsrr.fit: no visible global function definition for ‘lm’
    aftsrr.fit: no visible global function definition for ‘rexp’
    aftsrr.fit: no visible global function definition for ‘var’
    getSmoothSuv: no visible global function definition for ‘pnorm’
    print.summary.aftgee: no visible global function definition for
     ‘printCoefmat’
    print.summary.aftsrr: no visible global function definition for
     ‘printCoefmat’
    solveGehan: no visible global function definition for ‘nlm’
    summary.aftgee: no visible global function definition for ‘pnorm’
    summary.aftsrr: no visible global function definition for ‘pnorm’
    viEmp: no visible global function definition for ‘rexp’
    viEmp: no visible global function definition for ‘rnorm’
    viEmp: no visible global function definition for ‘var’
    zlFun: no visible global function definition for ‘lm’
    Undefined global functions or variables:
     lm model.extract model.matrix nlm pnorm printCoefmat rexp rnorm var
     vcov
    Consider adding
     importFrom("stats", "lm", "model.extract", "model.matrix", "nlm",
     "pnorm", "printCoefmat", "rexp", "rnorm", "var", "vcov")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0-0
Check: compiled code
Result: NOTE
    File ‘aftgee/libs/aftgee.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0-0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘copula’
Flavor: r-release-osx-x86_64

Version: 1.0-0
Check: examples
Result: ERROR
    Running examples in ‘aftgee-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: aftgee
    > ### Title: Accelerated Failure Time with Generalize Estimating Equation
    > ### Aliases: aftgee summary.aftgee
    > ### Keywords: aftgee
    >
    > ### ** Examples
    >
    > library(survival)
    > library(copula)
    Error in library(copula) : there is no package called ‘copula’
    Execution halted
Flavor: r-release-osx-x86_64