CRAN Package Check Results for Package anoint

Last updated on 2014-09-01 11:48:49.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3 3.90 47.68 51.58 NOTE
r-devel-linux-x86_64-debian-gcc 1.3 3.78 46.64 50.42 NOTE
r-devel-linux-x86_64-fedora-clang 1.3 127.90 NOTE
r-devel-linux-x86_64-fedora-gcc 1.3 117.19 NOTE
r-devel-osx-x86_64-clang 1.3 94.46 NOTE
r-devel-windows-ix86+x86_64 1.3 12.00 69.00 81.00 NOTE
r-patched-linux-x86_64 1.3 4.33 48.37 52.70 NOTE
r-patched-solaris-sparc 1.3 683.50 NOTE
r-patched-solaris-x86 1.3 166.00 NOTE
r-release-linux-ix86 1.3 4.74 59.51 64.25 NOTE
r-release-linux-x86_64 1.3 4.10 52.39 56.49 NOTE
r-release-osx-x86_64-mavericks 1.3 NOTE
r-release-osx-x86_64-snowleopard 1.3 NOTE
r-release-windows-ix86+x86_64 1.3 9.00 72.00 81.00 NOTE
r-oldrel-windows-ix86+x86_64 1.3 11.00 87.00 98.00 NOTE

Check Details

Version: 1.3
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘MASS’ ‘glmnet’ ‘grid’ ‘methods’ ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86

Version: 1.3
Check: R code for possible problems
Result: NOTE
    draweffects: no visible global function definition for ‘get.gpar’
    draweffects: no visible global function definition for ‘grid.segments’
    draweffects: no visible global function definition for ‘grid.circle’
    draweffects: no visible global function definition for ‘gpar’
    draweffects: no visible global function definition for ‘grid.lines’
    draweffects: no visible global function definition for ‘grid.text’
    drawgrid: no visible global function definition for ‘grid.rect’
    drawgrid: no visible global function definition for ‘gpar’
    effectaxis: no visible global function definition for ‘grid.segments’
    effectaxis: no visible global function definition for ‘popViewport’
    effectaxis: no visible global function definition for ‘pushViewport’
    effectaxis: no visible global function definition for ‘viewport’
    effectaxis: no visible global function definition for ‘get.gpar’
    effectaxis: no visible global function definition for ‘grid.text’
    forest : tapply.mi : <anonymous>: no visible global function definition
     for ‘coxph’
    forest : <anonymous>: no visible global function definition for ‘coxph’
    forest: no visible global function definition for ‘coxph’
    forest.subsets: no visible global function definition for
     ‘grid.newpage’
    forest.subsets: no visible global function definition for ‘viewport’
    forest.subsets: no visible global function definition for ‘grid.layout’
    forest.subsets: no visible global function definition for
     ‘pushViewport’
    forest.subsets: no visible global function definition for ‘popViewport’
    forestplot: no visible global function definition for ‘viewport’
    forestplot: no visible global function definition for ‘unit’
    forestplot: no visible global function definition for ‘pushViewport’
    forestplot: no visible global function definition for ‘grid.rect’
    forestplot: no visible global function definition for ‘gpar’
    forestplot: no visible global function definition for ‘grid.points’
    forestplot: no visible global function definition for ‘grid.lines’
    forestplot: no visible global function definition for ‘grid.text’
    forestplot.labels: no visible global function definition for
     ‘pushViewport’
    forestplot.labels: no visible global function definition for ‘viewport’
    forestplot.labels: no visible global function definition for ‘unit’
    forestplot.labels: no visible global function definition for
     ‘grid.text’
    forestplot.labels: no visible global function definition for ‘gpar’
    forestplot.labels: no visible global function definition for
     ‘popViewport’
    onebyone.int : <anonymous>: no visible global function definition for
     ‘coxph’
    onebyone.null : <anonymous>: no visible global function definition for
     ‘coxph’
    pim.approx: no visible global function definition for ‘coxph’
    pim.exact.fit: no visible global function definition for ‘coxph’
    pim.exact.loglik: no visible global function definition for ‘coxph’
    pim.fit : fitter: no visible global function definition for ‘coxph’
    pim.plot : tapply.mi : <anonymous>: no visible global function
     definition for ‘coxph’
    pim.plot: no visible global function definition for ‘coxph’
    pim.subsets : fitter: no visible global function definition for ‘coxph’
    select.stepAIC: no visible global function definition for ‘stepAIC’
    subgroupaxis: no visible global function definition for ‘popViewport’
    subgroupaxis: no visible global function definition for ‘pushViewport’
    subgroupaxis: no visible global function definition for ‘viewport’
    subgroupaxis: no visible global function definition for ‘get.gpar’
    subgroupaxis: no visible global function definition for ‘grid.text’
    uim.int: no visible global function definition for ‘coxph’
    uim.null: no visible global function definition for ‘coxph’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64

Version: 1.3
Check: for old-style vignette sources
Result: NOTE
    Vignette sources only in ‘inst/doc’:
     ‘anoint.Rnw’
    A ‘vignettes’ directory is required as from R 3.1.0
    and these will not be indexed nor checked
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard, r-release-windows-ix86+x86_64

Version: 1.3
Check: Rd line widths
Result: NOTE
    Rd file 'data.mim.Rd':
     \usage lines wider than 90 characters:
     data.anoint(alpha, beta, gamma, mean, vcov, n=100, event=.8, type = c("binomial","survival"))
    
    Rd file 'mim.Rd':
     \usage lines wider than 90 characters:
     anoint(formula,data,family="binomial",select=NULL,nfolds=10,type.measure="deviance",keep.vars=NULL,na.action=na.omit,...)
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     ‘MASS’ ‘glmnet’ ‘methods’ ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavors: r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.3
Check: dependencies in R code
Result: NOTE
    Packages in Depends field not imported from:
     'MASS' 'glmnet' 'methods' 'survival'
     These packages need to be imported from for the case when
     this namespace is loaded but not attached.
    See the information on DESCRIPTION files in the chapter 'Creating R
    packages' of the 'Writing R Extensions' manual.
Flavor: r-release-osx-x86_64-snowleopard

Version: 1.3
Check: for old-style vignette sources
Result: NOTE
    Vignette sources only in 'inst/doc':
     'anoint.Rnw'
    A 'vignettes' directory will be required as from R 3.1.0
Flavor: r-oldrel-windows-ix86+x86_64