CRAN Package Check Results for Package apcluster

Last updated on 2017-05-28 23:49:49.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4.3 23.75 75.32 99.07 NOTE
r-devel-linux-x86_64-debian-gcc 1.4.3 26.66 72.06 98.73 NOTE
r-devel-linux-x86_64-fedora-clang 1.4.3 204.34 NOTE
r-devel-linux-x86_64-fedora-gcc 1.4.3 201.60 NOTE
r-devel-windows-ix86+x86_64 1.4.3 75.00 205.00 280.00 OK
r-patched-linux-x86_64 1.4.3 23.12 75.69 98.81 NOTE
r-patched-solaris-sparc 1.4.3 894.90 NOTE --no-vignettes
r-patched-solaris-x86 1.4.3 191.40 WARN
r-release-linux-x86_64 1.4.3 23.11 76.12 99.23 NOTE
r-release-windows-ix86+x86_64 1.4.3 102.00 168.00 270.00 OK
r-release-osx-x86_64 1.4.3 ERROR
r-oldrel-windows-ix86+x86_64 1.4.3 104.00 144.00 248.00 OK
r-oldrel-osx-x86_64 1.4.3 OK

Check Details

Version: 1.4.3
Check: compiled code
Result: NOTE
    File ‘apcluster/libs/apcluster.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.4.3
Flags: --no-vignettes
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘kebabs’
Flavor: r-patched-solaris-sparc

Version: 1.4.3
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘kebabs’
Flavor: r-patched-solaris-x86

Version: 1.4.3
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Quitting from lines 31-44 (apcluster.Rnw)
    Error: processing vignette 'apcluster.Rnw' failed with diagnostics:
    there is no package called 'kebabs'
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.4.3
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘Biostrings’ ‘kebabs’
Flavor: r-release-osx-x86_64

Version: 1.4.3
Check: examples
Result: ERROR
    Running examples in ‘apcluster-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: ch22Promoters
    > ### Title: ch22Promoters Data Set
    > ### Aliases: ch22Promoters
    > ### Keywords: datasets
    >
    > ### ** Examples
    >
    > ## load Biostrings package
    > library(Biostrings)
    Error in library(Biostrings) : there is no package called ‘Biostrings’
    Execution halted
Flavor: r-release-osx-x86_64

Version: 1.4.3
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning: running command 'kpsewhich framed.sty' had status 1
    Warning in test_latex_pkg("framed", system.file("misc", "framed.sty", package = "knitr")) :
     unable to find LaTeX package 'framed'; will use a copy from knitr
    Quitting from lines 31-44 (apcluster.Rnw)
    Error: processing vignette 'apcluster.Rnw' failed with diagnostics:
    there is no package called 'kebabs'
    Execution halted
Flavor: r-release-osx-x86_64