CRAN Package Check Results for Package bartMachine

Last updated on 2015-07-03 16:47:10.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.0 4.92 72.04 76.96 NOTE
r-devel-linux-x86_64-debian-gcc 1.2.0 4.78 71.15 75.92 NOTE
r-devel-linux-x86_64-fedora-clang 1.2.0 161.73 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2.0 147.21 NOTE
r-devel-osx-x86_64-clang 1.2.0 131.55 NOTE
r-devel-windows-ix86+x86_64 1.2.0 14.00 99.00 113.00 NOTE
r-patched-linux-x86_64 1.2.0 5.19 70.89 76.08 NOTE
r-patched-solaris-sparc 1.2.0 960.10 NOTE
r-patched-solaris-x86 1.2.0 217.40 NOTE
r-release-linux-x86_64 1.2.0 4.96 71.22 76.18 NOTE
r-release-osx-x86_64-mavericks 1.2.0 NOTE
r-release-windows-ix86+x86_64 1.2.0 21.00 111.00 132.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2.0 21.00 150.00 171.00 NOTE

Check Details

Version: 1.2.0
Check: installed package size
Result: NOTE
     installed size is 5.9Mb
     sub-directories of 1Mb or more:
     doc 2.2Mb
     java 3.5Mb
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.2.0
Check: R code for possible problems
Result: NOTE
    bart_machine_get_posterior: no visible global function definition for
     ‘na.omit’
    bart_predict_for_test_data: no visible global function definition for
     ‘predict’
    build_bart_machine: no visible global function definition for ‘na.omit’
    build_bart_machine: no visible global function definition for ‘lm’
    build_bart_machine: no visible global function definition for ‘var’
    build_bart_machine: no visible global function definition for ‘rnorm’
    build_bart_machine: no visible global function definition for ‘rchisq’
    build_bart_machine_cv: no visible global function definition for
     ‘rnorm’
    build_bart_machine_cv: no visible global function definition for
     ‘quantile’
    calc_credible_intervals: no visible global function definition for
     ‘quantile’
    calc_prediction_intervals: no visible global function definition for
     ‘rnorm’
    calc_prediction_intervals: no visible global function definition for
     ‘quantile’
    check_bart_error_assumptions: no visible global function definition for
     ‘graphics.off’
    check_bart_error_assumptions: no visible global function definition for
     ‘par’
    check_bart_error_assumptions: no visible global function definition for
     ‘shapiro.test’
    check_bart_error_assumptions: no visible global function definition for
     ‘plot’
    check_bart_error_assumptions: no visible global function definition for
     ‘abline’
    cov_importance_test: no visible global function definition for ‘hist’
    cov_importance_test: no visible global function definition for ‘abline’
    get_sigsqs: no visible global function definition for ‘quantile’
    get_sigsqs: no visible global function definition for ‘hist’
    get_sigsqs: no visible global function definition for ‘abline’
    interaction_investigator: no visible binding for global variable ‘sd’
    interaction_investigator: no visible global function definition for
     ‘par’
    interaction_investigator: no visible global function definition for
     ‘barplot’
    interaction_investigator: no visible global function definition for
     ‘segments’
    interaction_investigator: no visible global function definition for
     ‘rgb’
    investigate_var_importance: no visible binding for global variable ‘sd’
    investigate_var_importance: no visible global function definition for
     ‘par’
    investigate_var_importance: no visible global function definition for
     ‘barplot’
    investigate_var_importance: no visible global function definition for
     ‘segments’
    investigate_var_importance: no visible global function definition for
     ‘rgb’
    k_fold_cv: no visible global function definition for ‘rnorm’
    k_fold_cv: no visible global function definition for ‘quantile’
    pd_plot: no visible global function definition for ‘quantile’
    pd_plot: no visible global function definition for ‘qnorm’
    pd_plot: no visible binding for global variable ‘quantile’
    pd_plot: no visible global function definition for ‘plot’
    pd_plot: no visible global function definition for ‘polygon’
    pd_plot: no visible global function definition for ‘lines’
    plot_convergence_diagnostics: no visible global function definition for
     ‘par’
    plot_mh_acceptance_reject: no visible global function definition for
     ‘plot’
    plot_mh_acceptance_reject: no visible global function definition for
     ‘abline’
    plot_mh_acceptance_reject: no visible global function definition for
     ‘points’
    plot_mh_acceptance_reject: no visible global function definition for
     ‘lines’
    plot_mh_acceptance_reject: no visible global function definition for
     ‘loess.smooth’
    plot_sigsqs_convergence_diagnostics: no visible global function
     definition for ‘plot’
    plot_sigsqs_convergence_diagnostics: no visible global function
     definition for ‘quantile’
    plot_sigsqs_convergence_diagnostics: no visible global function
     definition for ‘points’
    plot_sigsqs_convergence_diagnostics: no visible global function
     definition for ‘abline’
    plot_tree_depths: no visible global function definition for ‘plot’
    plot_tree_depths: no visible global function definition for ‘lines’
    plot_tree_depths: no visible global function definition for ‘rgb’
    plot_tree_depths: no visible global function definition for ‘abline’
    plot_tree_num_nodes: no visible global function definition for ‘plot’
    plot_tree_num_nodes: no visible global function definition for ‘lines’
    plot_tree_num_nodes: no visible global function definition for ‘rgb’
    plot_tree_num_nodes: no visible global function definition for ‘abline’
    plot_y_vs_yhat: no visible global function definition for ‘plot’
    plot_y_vs_yhat: no visible global function definition for ‘segments’
    plot_y_vs_yhat: no visible global function definition for ‘points’
    plot_y_vs_yhat: no visible global function definition for ‘abline’
    rmse_by_num_trees: no visible binding for global variable ‘sd’
    rmse_by_num_trees: no visible global function definition for ‘segments’
    shapiro_wilk_p_val: no visible global function definition for
     ‘shapiro.test’
    summary.bartMachine: no visible global function definition for
     ‘shapiro.test’
    summary.bartMachine: no visible global function definition for ‘t.test’
    var_selection_by_permute: no visible binding for global variable
     ‘quantile’
    var_selection_by_permute: no visible global function definition for
     ‘quantile’
    var_selection_by_permute: no visible binding for global variable ‘sd’
    var_selection_by_permute: no visible global function definition for
     ‘par’
    var_selection_by_permute: no visible global function definition for
     ‘axis’
    var_selection_by_permute: no visible global function definition for
     ‘points’
    var_selection_by_permute : <anonymous>: no visible global function
     definition for ‘segments’
    var_selection_by_permute : <anonymous>: no visible global function
     definition for ‘quantile’
    var_selection_by_permute: no visible global function definition for
     ‘abline’
    Undefined global functions or variables:
     abline axis barplot graphics.off hist lines lm loess.smooth na.omit
     par plot points polygon predict qnorm quantile rchisq rgb rnorm sd
     segments shapiro.test t.test var
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64