CRAN Package Check Results for Package caret

Last updated on 2014-04-24 11:48:42.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 6.0-24 4.10 449.32 453.42 OK
r-devel-linux-x86_64-debian-gcc 6.0-24 3.85 451.77 455.62 OK
r-devel-linux-x86_64-fedora-clang 6.0-24 938.80 OK
r-devel-linux-x86_64-fedora-gcc 6.0-24 921.56 OK
r-devel-osx-x86_64-clang 6.0-24 596.27 OK
r-devel-osx-x86_64-gcc 6.0-24 ERROR
r-devel-windows-ix86+x86_64 6.0-24 12.00 645.00 657.00 OK
r-patched-linux-x86_64 6.0-24 4.00 452.94 456.94 OK
r-patched-solaris-sparc 6.0-24 829.90 OK --no-vignettes
r-patched-solaris-x86 6.0-24 990.80 NOTE
r-release-linux-ix86 6.0-24 15.00 634.00 649.00 OK
r-release-linux-x86_64 6.0-24 3.87 474.35 478.22 OK
r-release-osx-x86_64-mavericks 6.0-24 NOTE
r-release-osx-x86_64-snowleopard 6.0-24 NOTE
r-release-windows-ix86+x86_64 6.0-24 14.00 637.00 651.00 OK
r-oldrel-windows-ix86+x86_64 6.0-24 14.00 637.00 651.00 OK

Check Details

Version: 6.0-24
Check: package dependencies
Result: ERROR
    Packages required but not available: ‘ggplot2’ ‘car’
    
    Packages suggested but not available for checking:
     ‘klaR’ ‘party’ ‘proxy’ ‘affy’
    
    See the information on DESCRIPTION files in the chapter ‘Creating R
    packages’ of the ‘Writing R Extensions’ manual.
Flavor: r-devel-osx-x86_64-gcc

Version: 6.0-24
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    The following object is masked from ‘package:caret’:
    
     R2
    
    The following object is masked from ‘package:stats’:
    
     loadings
    
    Loading required package: klaR
    Loading required package: MASS
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'caret.tex' failed.
    LaTeX errors:
    ! Undefined control sequence.
    l.137 \RestyleAlgo
     {plain}
    The control sequence at the end of the top line
    of your error message was never \def'ed. If you have
    ! Undefined control sequence.
    l.138 \DontPrintSemicolon
    
    The control sequence at the end of the top line
    of your error message was never \def'ed. If you have
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-patched-solaris-x86

Version: 6.0-24
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘affy’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 6.0-24
Check: R code for possible problems
Result: NOTE
    normalize.AffyBatch.normalize2Reference: no visible global function
     definition for ‘pmindex’
    normalize.AffyBatch.normalize2Reference: no visible global function
     definition for ‘intensity’
    normalize.AffyBatch.normalize2Reference: no visible global function
     definition for ‘intensity<-’
    normalize.AffyBatch.normalize2Reference: no visible global function
     definition for ‘mmindex’
    normalize.AffyBatch.normalize2Reference: no visible global function
     definition for ‘indexProbes’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 6.0-24
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘affy’
Flavors: r-release-osx-x86_64-mavericks, r-release-osx-x86_64-snowleopard

Version: 6.0-24
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    
    Attaching package: ‘pls’
    
    The following object is masked from ‘package:caret’:
    
     R2
    
    The following object is masked from ‘package:stats’:
    
     loadings
    
    Loading required package: klaR
    Loading required package: MASS
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'caret.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `lastpage.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    est/caret/vignettes/caret.tex:13: ==> Fatal error occurred, no output PDF file
     produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-release-osx-x86_64-mavericks