CRAN Package Check Results for Package caret

Last updated on 2015-07-05 14:46:24.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 6.0-47 7.26 408.71 415.97 NOTE
r-devel-linux-x86_64-debian-gcc 6.0-47 5.98 403.53 409.51 NOTE
r-devel-linux-x86_64-fedora-clang 6.0-47 840.76 NOTE
r-devel-linux-x86_64-fedora-gcc 6.0-47 799.30 NOTE
r-devel-osx-x86_64-clang 6.0-47 610.73 OK
r-devel-windows-ix86+x86_64 6.0-47 26.00 168.00 194.00 NOTE --no-vignettes
r-patched-linux-x86_64 6.0-47 6.26 431.80 438.06 OK
r-patched-solaris-sparc 6.0-47 1208.80 OK --no-vignettes
r-patched-solaris-x86 6.0-47 1005.20 OK
r-release-linux-x86_64 6.0-47 6.38 404.12 410.50 OK
r-release-osx-x86_64-mavericks 6.0-47 OK
r-release-windows-ix86+x86_64 6.0-47 28.00 185.00 213.00 OK --no-vignettes
r-oldrel-windows-ix86+x86_64 6.0-47 41.00 220.00 261.00 OK --no-vignettes

Check Details

Version: 6.0-47
Check: R code for possible problems
Result: NOTE
    GarsonWeights: no visible global function definition for ‘coef’
    Kim2009: no visible global function definition for ‘runif’
    Kim2009: Error while checking: invalid ‘envir’ argument
    LPH07_1: no visible global function definition for ‘rbinom’
    LPH07_1: no visible global function definition for ‘rnorm’
    LPH07_2: no visible global function definition for ‘rnorm’
    MeanSD: no visible binding for global variable ‘sd’
    R2: no visible global function definition for ‘complete.cases’
    R2: no visible global function definition for ‘cor’
    R2: no visible global function definition for ‘var’
    SLC14_1: no visible global function definition for ‘rnorm’
    SLC14_2: no visible global function definition for ‘rnorm’
    adaptiveWorkflow: no visible global function definition for ‘head’
    adaptiveWorkflow: no visible global function definition for
     ‘complete.cases’
    additivePlot : <anonymous>: no visible global function definition for
     ‘quantile’
    additivePlot : <anonymous>: no visible global function definition for
     ‘median’
    additivePlot: no visible global function definition for ‘predict’
    anovaScores: no visible global function definition for ‘anova’
    anovaScores: no visible global function definition for ‘lm’
    avNNet.formula: no visible global function definition for
     ‘model.matrix’
    avNNet.formula: no visible global function definition for
     ‘model.weights’
    avNNet.formula: no visible global function definition for
     ‘model.response’
    avNNet.formula: no visible global function definition for ‘.getXlevels’
    bag.formula: no visible binding for global variable ‘na.omit’
    bag.formula: no visible global function definition for ‘model.response’
    bag.formula: no visible global function definition for ‘model.weights’
    bag.formula: no visible global function definition for ‘model.matrix’
    bag.formula: no visible binding for global variable ‘contrasts’
    bagEarth.default : oobFoo: no visible global function definition for
     ‘predict’
    bagEarth.formula: no visible binding for global variable ‘na.omit’
    bagEarth.formula: no visible global function definition for
     ‘model.response’
    bagEarth.formula: no visible global function definition for
     ‘model.weights’
    bagEarth.formula: no visible global function definition for
     ‘model.matrix’
    bagEarth.formula: no visible binding for global variable ‘contrasts’
    bagEarthStats : <anonymous>: no visible global function definition for
     ‘quantile’
    bagFDA.default : oobFoo: no visible global function definition for
     ‘predict’
    bagFDA.formula: no visible binding for global variable ‘na.omit’
    bagFDA.formula: no visible global function definition for
     ‘model.response’
    bagFDA.formula: no visible global function definition for
     ‘model.weights’
    bagFDA.formula: no visible global function definition for
     ‘model.matrix’
    bagFDA.formula: no visible binding for global variable ‘contrasts’
    bagImp: no visible global function definition for ‘as.formula’
    bt_eval: no visible global function definition for ‘qnorm’
    bwplot.diff.resamples : <anonymous>: no visible global function
     definition for ‘stack’
    bwplot.diff.resamples: no visible global function definition for
     ‘as.formula’
    bwplot.resamples : <anonymous>: no visible global function definition
     for ‘median’
    bwplot.resamples: no visible global function definition for
     ‘as.formula’
    ccc: no visible global function definition for ‘cov’
    cforestStats: no visible global function definition for ‘predict’
    char_mode: no visible global function definition for ‘complete.cases’
    checkInstall: no visible global function definition for ‘menu’
    checkInstall: no visible global function definition for
     ‘install.packages’
    class2ind: no visible global function definition for ‘model.matrix’
    classDist.default: no visible global function definition for ‘quantile’
    classDist.default: no visible global function definition for ‘predict’
    classDist.default : getStats: no visible global function definition for
     ‘cov’
    cluster.resamples: no visible global function definition for ‘dist’
    confusionMatrix.table : propCI: no visible global function definition
     for ‘binom.test’
    confusionMatrix.table : propTest: no visible global function definition
     for ‘binom.test’
    confusionMatrix.table: no visible global function definition for
     ‘mcnemar.test’
    corr_mat: no visible global function definition for ‘cor’
    createDataPartition: no visible global function definition for
     ‘quantile’
    createFolds: no visible global function definition for ‘quantile’
    createModel: no visible global function definition for ‘predict’
    densityplot.diff.resamples : <anonymous>: no visible global function
     definition for ‘stack’
    densityplot.diff.resamples: no visible global function definition for
     ‘as.formula’
    densityplot.resamples: no visible global function definition for
     ‘as.formula’
    densityplot.rfe: no visible global function definition for ‘as.formula’
    densityplot.sbf: no visible global function definition for ‘as.formula’
    densityplot.train: no visible global function definition for
     ‘as.formula’
    depth2cp: no visible global function definition for ‘approx’
    diff.resamples: no visible binding for global variable ‘t.test’
    diffmat: no visible global function definition for ‘sd’
    dotPlot: no visible global function definition for ‘stack’
    dotplot.diff.resamples : <anonymous>: no visible global function
     definition for ‘aggregate’
    dotplot.diff.resamples : <anonymous>: no visible binding for global
     variable ‘median’
    dotplot.resamples : <anonymous>: no visible global function definition
     for ‘t.test’
    dotplot.resamples : <anonymous>: no visible global function definition
     for ‘median’
    dotplot.resamples: no visible global function definition for
     ‘as.formula’
    dotplot.resamples : <anonymous>: no visible global function definition
     for ‘aggregate’
    dotplot.resamples : <anonymous> : <anonymous>: no visible global
     function definition for ‘median’
    dummyVars.default: no visible global function definition for
     ‘as.formula’
    dummyVars.default: no visible global function definition for
     ‘model.frame’
    enumLC.formula: no visible global function definition for ‘lm’
    evalSummaryFunction: no visible global function definition for ‘runif’
    expoTrans.default: no visible global function definition for ‘optim’
    expoTrans.numeric: no visible global function definition for ‘optim’
    extractProb: no visible global function definition for ‘flush.console’
    featurePlot: no visible global function definition for ‘stack’
    featurePlot : <anonymous>: no visible global function definition for
     ‘var’
    filterVarImp : paraFoo: no visible global function definition for
     ‘coef’
    filterVarImp : paraFoo: no visible global function definition for ‘lm’
    filterVarImp : paraFoo: no visible binding for global variable
     ‘na.omit’
    filterVarImp : nonparaFoo: no visible global function definition for
     ‘lm’
    filterVarImp : nonparaFoo: no visible binding for global variable
     ‘na.omit’
    filterVarImp : nonparaFoo: no visible global function definition for
     ‘loess’
    filterVarImp : nonparaFoo: no visible global function definition for
     ‘resid’
    fitted.train: no visible global function definition for ‘fitted’
    fitted.train: no visible global function definition for ‘predict’
    ga_select: no visible global function definition for ‘runif’
    gafs.default: no visible global function definition for
     ‘getFromNamespace’
    gafs.default: no visible global function definition for ‘runif’
    gafs_uCrossover: no visible global function definition for ‘runif’
    gamFormula: no visible global function definition for ‘as.formula’
    gamScores: no visible global function definition for ‘anova’
    gamScores: no visible global function definition for ‘lm’
    get_averages.rfe : <anonymous>: no visible global function definition
     for ‘complete.cases’
    get_averages.sbf : <anonymous>: no visible global function definition
     for ‘complete.cases’
    get_averages.train : <anonymous>: no visible global function definition
     for ‘complete.cases’
    get_fitness_differences : snr : <anonymous>: no visible global function
     definition for ‘t.test’
    ggplot.train: no visible global function definition for ‘as.formula’
    gls_eval: no visible binding for global variable ‘na.omit’
    gls_eval: no visible global function definition for ‘t.test’
    histogram.rfe: no visible global function definition for ‘as.formula’
    histogram.sbf: no visible global function definition for ‘as.formula’
    histogram.train: no visible global function definition for ‘as.formula’
    icr.default: no visible global function definition for ‘predict’
    icr.default: no visible global function definition for ‘lm’
    icr.formula: no visible global function definition for ‘model.matrix’
    icr.formula: no visible global function definition for ‘model.weights’
    icr.formula: no visible global function definition for ‘model.response’
    icr.formula: no visible global function definition for ‘.getXlevels’
    ipredStats : foo: no visible global function definition for ‘predict’
    ipredStats : foo: no visible global function definition for ‘cor’
    ipredStats: no visible binding for global variable ‘sd’
    knn3.formula: no visible global function definition for ‘terms’
    knn3.formula: no visible global function definition for ‘model.extract’
    knn3.formula: no visible global function definition for ‘model.matrix’
    knnreg.formula: no visible global function definition for ‘terms’
    knnreg.formula: no visible global function definition for
     ‘model.extract’
    knnreg.formula: no visible global function definition for
     ‘model.matrix’
    levelplot.diff.resamples: no visible global function definition for
     ‘complete.cases’
    long2wide: no visible global function definition for ‘reshape’
    looTrainWorkflow: no visible global function definition for ‘head’
    make_noise: no visible global function definition for ‘rnorm’
    make_noise: no visible global function definition for ‘toeplitz’
    manlyLik: no visible global function definition for ‘var’
    missing_packages: no visible global function definition for
     ‘installed.packages’
    mnLogLoss: no visible global function definition for ‘getFromNamespace’
    modelCor: no visible global function definition for ‘cor’
    nominalTrainWorkflow: no visible global function definition for ‘head’
    nominalTrainWorkflow: no visible global function definition for
     ‘complete.cases’
    oldfilterVarImp : paraFoo: no visible global function definition for
     ‘coef’
    oldfilterVarImp : paraFoo: no visible global function definition for
     ‘lm’
    oldfilterVarImp : paraFoo: no visible binding for global variable
     ‘na.omit’
    oldfilterVarImp : nonparaFoo: no visible global function definition for
     ‘lm’
    oldfilterVarImp : nonparaFoo: no visible binding for global variable
     ‘na.omit’
    oldfilterVarImp : nonparaFoo: no visible global function definition for
     ‘loess’
    oldfilterVarImp : nonparaFoo: no visible global function definition for
     ‘resid’
    oob_pred.list: no visible global function definition for ‘reshape’
    panel.needle: no visible global function definition for ‘extendrange’
    parallelplot.resamples: no visible binding for global variable ‘median’
    partRuleSummary: no visible global function definition for
     ‘capture.output’
    pcaNNet.default: no visible global function definition for ‘predict’
    pcaNNet.formula: no visible global function definition for
     ‘model.matrix’
    pcaNNet.formula: no visible global function definition for
     ‘model.weights’
    pcaNNet.formula: no visible global function definition for
     ‘model.response’
    pcaNNet.formula: no visible global function definition for
     ‘.getXlevels’
    pickVars: no visible binding for global variable ‘var’
    plot.gafs: no visible global function definition for ‘update’
    plot.prcomp.resamples: no visible global function definition for
     ‘extendrange’
    plot.rfe: no visible global function definition for ‘as.formula’
    plot.safs: no visible global function definition for ‘update’
    plot.train: no visible global function definition for ‘as.formula’
    plot.varImp.train: no visible global function definition for ‘stack’
    plot.varImp.train: no visible global function definition for
     ‘as.formula’
    plotClassProbs: no visible global function definition for ‘as.formula’
    plotObsVsPred: no visible global function definition for ‘stack’
    plotObsVsPred: no visible global function definition for ‘extendrange’
    plotRef: no visible global function definition for ‘extendrange’
    plotRef: no visible global function definition for ‘approx’
    plsda.default : makeModels: no visible global function definition for
     ‘predict’
    plsda.default: no visible global function definition for ‘predict’
    postResample: no visible global function definition for ‘cor’
    preProcess.default: no visible global function definition for ‘predict’
    preProcess.default: no visible binding for global variable ‘sd’
    preProcess.default: no visible binding for global variable ‘median’
    preProcess.default: no visible global function definition for
     ‘complete.cases’
    predict.avNNet: no visible binding for global variable ‘fitted.values’
    predict.avNNet: no visible global function definition for
     ‘fitted.values’
    predict.avNNet: no visible global function definition for
     ‘delete.response’
    predict.avNNet: no visible global function definition for ‘model.frame’
    predict.avNNet: no visible binding for global variable ‘na.omit’
    predict.avNNet: no visible global function definition for
     ‘.checkMFClasses’
    predict.avNNet: no visible global function definition for
     ‘model.matrix’
    predict.avNNet: no visible binding for global variable ‘predict’
    predict.avNNet: no visible global function definition for ‘predict’
    predict.bagEarth : <anonymous>: no visible global function definition
     for ‘predict’
    predict.bagFDA : getTrainPred: no visible global function definition
     for ‘predict’
    predict.bagFDA : <anonymous>: no visible global function definition for
     ‘predict’
    predict.classDist: no visible global function definition for ‘predict’
    predict.classDist : pred: no visible global function definition for
     ‘mahalanobis’
    predict.dummyVars: no visible binding for global variable ‘na.pass’
    predict.dummyVars: no visible global function definition for
     ‘delete.response’
    predict.dummyVars: no visible global function definition for
     ‘model.frame’
    predict.dummyVars: no visible global function definition for
     ‘model.matrix’
    predict.icr: no visible global function definition for ‘fitted’
    predict.icr: no visible global function definition for
     ‘delete.response’
    predict.icr: no visible global function definition for ‘model.frame’
    predict.icr: no visible binding for global variable ‘na.omit’
    predict.icr: no visible global function definition for
     ‘.checkMFClasses’
    predict.icr: no visible global function definition for ‘model.matrix’
    predict.icr: no visible global function definition for ‘predict’
    predict.knn3: no visible global function definition for ‘model.frame’
    predict.knn3: no visible global function definition for ‘as.formula’
    predict.knn3: no visible global function definition for
     ‘delete.response’
    predict.knn3: no visible global function definition for ‘model.matrix’
    predict.knnreg: no visible global function definition for ‘model.frame’
    predict.knnreg: no visible global function definition for ‘as.formula’
    predict.knnreg: no visible global function definition for
     ‘delete.response’
    predict.knnreg: no visible global function definition for
     ‘model.matrix’
    predict.list: no visible binding for global variable ‘predict’
    predict.pcaNNet: no visible global function definition for ‘fitted’
    predict.pcaNNet: no visible global function definition for
     ‘delete.response’
    predict.pcaNNet: no visible global function definition for
     ‘model.frame’
    predict.pcaNNet: no visible binding for global variable ‘na.omit’
    predict.pcaNNet: no visible global function definition for
     ‘.checkMFClasses’
    predict.pcaNNet: no visible global function definition for
     ‘model.matrix’
    predict.pcaNNet: no visible global function definition for ‘predict’
    predict.plsda: no visible global function definition for ‘predict’
    predict.preProcess: no visible global function definition for ‘predict’
    predict.preProcess: no visible global function definition for
     ‘complete.cases’
    predict.rfe: no visible global function definition for
     ‘delete.response’
    predict.rfe: no visible global function definition for ‘model.frame’
    predict.rfe: no visible binding for global variable ‘na.omit’
    predict.rfe: no visible global function definition for
     ‘.checkMFClasses’
    predict.rfe: no visible global function definition for ‘model.matrix’
    predict.sbf: no visible global function definition for
     ‘delete.response’
    predict.sbf: no visible global function definition for ‘model.frame’
    predict.sbf: no visible binding for global variable ‘na.omit’
    predict.sbf: no visible global function definition for
     ‘.checkMFClasses’
    predict.sbf: no visible global function definition for ‘model.matrix’
    predict.splsda: no visible global function definition for ‘predict’
    predict.train: no visible binding for global variable ‘na.omit’
    predict.train: no visible global function definition for ‘update’
    predict.train: no visible global function definition for
     ‘delete.response’
    predict.train: no visible global function definition for ‘model.frame’
    predict.train: no visible global function definition for
     ‘.checkMFClasses’
    predict.train: no visible global function definition for ‘model.matrix’
    predictionFunction: no visible global function definition for ‘predict’
    print.gafs: no visible global function definition for
     ‘getFromNamespace’
    print.icr: no visible global function definition for ‘coef’
    print.safs: no visible global function definition for
     ‘getFromNamespace’
    print.summary.bagEarth : <anonymous>: no visible global function
     definition for ‘quantile’
    print.summary.bagFDA : <anonymous>: no visible global function
     definition for ‘quantile’
    probFunction: no visible global function definition for ‘predict’
    process_diffs: no visible global function definition for ‘reshape’
    resampleSummary: no visible binding for global variable ‘sd’
    residuals.train: no visible global function definition for ‘residuals’
    residuals.train: no visible global function definition for ‘predict’
    rfe.default: no visible global function definition for ‘runif’
    rfe.default: no visible global function definition for ‘predict’
    rfe.formula: no visible global function definition for ‘model.matrix’
    rfe.formula: no visible global function definition for ‘model.response’
    rfe.formula: no visible global function definition for ‘.getXlevels’
    rfeIter: no visible global function definition for ‘flush.console’
    rfeIter: no visible global function definition for ‘complete.cases’
    rfeIter: no visible binding for global variable ‘var’
    ripperRuleSummary: no visible global function definition for
     ‘capture.output’
    sa_select: no visible global function definition for ‘runif’
    safs.default: no visible global function definition for
     ‘getFromNamespace’
    safs.default: no visible global function definition for ‘runif’
    sbf.default: no visible global function definition for ‘runif’
    sbf.default: no visible global function definition for ‘predict’
    sbf.formula: no visible global function definition for ‘model.matrix’
    sbf.formula: no visible global function definition for ‘model.response’
    sbf.formula: no visible global function definition for ‘.getXlevels’
    sensitivity.default: no visible global function definition for
     ‘complete.cases’
    seq_eval: no visible global function definition for ‘lm’
    seq_eval: no visible global function definition for ‘pt’
    seq_eval: no visible global function definition for ‘coef’
    seq_eval: no visible global function definition for ‘t.test’
    smootherFormula: no visible global function definition for ‘as.formula’
    sortImp: no visible global function definition for ‘runif’
    specificity.default: no visible global function definition for
     ‘complete.cases’
    splom.resamples: no visible global function definition for
     ‘extendrange’
    splsda.default : makeModels: no visible global function definition for
     ‘predict’
    splsda.default: no visible global function definition for ‘predict’
    stripplot.rfe: no visible global function definition for ‘as.formula’
    stripplot.train: no visible global function definition for ‘as.formula’
    summary.bag : <anonymous>: no visible global function definition for
     ‘quantile’
    summary.bagEarth : <anonymous>: no visible global function definition
     for ‘quantile’
    summary.bagFDA : <anonymous>: no visible global function definition for
     ‘quantile’
    summary.diff.resamples: no visible global function definition for
     ‘p.adjust’
    train.default: no visible global function definition for
     ‘flush.console’
    train.default: no visible global function definition for ‘predict’
    train.default: no visible global function definition for ‘extendrange’
    train.default: no visible global function definition for ‘object.size’
    train.formula: no visible binding for global variable ‘na.fail’
    train.formula: no visible global function definition for ‘model.matrix’
    train.formula: no visible global function definition for
     ‘model.response’
    train.formula: no visible global function definition for
     ‘model.weights’
    train.formula: no visible global function definition for ‘.getXlevels’
    twoClassSim: no visible global function definition for ‘rnorm’
    twoClassSim: no visible global function definition for ‘runif’
    twoClassSim: no visible global function definition for ‘toeplitz’
    twoClassSim: Error while checking: invalid ‘envir’ argument
    varImp.rfe: no visible binding for global variable ‘var’
    xyplot.calibration: no visible global function definition for
     ‘extendrange’
    xyplot.calibration: no visible global function definition for
     ‘as.formula’
    xyplot.lift: no visible global function definition for ‘extendrange’
    xyplot.lift: no visible global function definition for ‘as.formula’
    xyplot.resamples: no visible global function definition for
     ‘extendrange’
    xyplot.resamples : prepanel.ci: no visible global function definition
     for ‘extendrange’
    xyplot.resamples : <anonymous>: no visible global function definition
     for ‘t.test’
    xyplot.rfe: no visible global function definition for ‘as.formula’
    xyplot.train: no visible global function definition for ‘as.formula’
    Undefined global functions or variables:
     .checkMFClasses .getXlevels aggregate anova approx as.formula
     binom.test capture.output coef complete.cases contrasts cor cov
     delete.response dist extendrange fitted fitted.values flush.console
     getFromNamespace head install.packages installed.packages lm loess
     mahalanobis mcnemar.test median menu model.extract model.frame
     model.matrix model.response model.weights na.fail na.omit na.pass
     object.size optim p.adjust predict pt qnorm quantile rbinom reshape
     resid residuals rnorm runif sd stack t.test terms toeplitz update var
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 6.0-47
Flags: --no-vignettes
Check: R code for possible problems
Result: NOTE
    GarsonWeights: no visible global function definition for 'coef'
    Kim2009: no visible global function definition for 'runif'
    Kim2009: no visible global function definition for 'binomial'
    LPH07_1: no visible global function definition for 'rbinom'
    LPH07_1: no visible global function definition for 'rnorm'
    LPH07_2: no visible global function definition for 'rnorm'
    MeanSD: no visible binding for global variable 'sd'
    R2: no visible global function definition for 'complete.cases'
    R2: no visible global function definition for 'cor'
    R2: no visible global function definition for 'var'
    SLC14_1: no visible global function definition for 'rnorm'
    SLC14_2: no visible global function definition for 'rnorm'
    adaptiveWorkflow: no visible global function definition for 'head'
    adaptiveWorkflow: no visible global function definition for
     'complete.cases'
    additivePlot : <anonymous>: no visible global function definition for
     'quantile'
    additivePlot : <anonymous>: no visible global function definition for
     'median'
    additivePlot: no visible global function definition for 'predict'
    anovaScores: no visible global function definition for 'anova'
    anovaScores: no visible global function definition for 'lm'
    avNNet.formula: no visible global function definition for
     'model.matrix'
    avNNet.formula: no visible global function definition for
     'model.weights'
    avNNet.formula: no visible global function definition for
     'model.response'
    avNNet.formula: no visible global function definition for '.getXlevels'
    bag.formula: no visible binding for global variable 'na.omit'
    bag.formula: no visible global function definition for 'model.response'
    bag.formula: no visible global function definition for 'model.weights'
    bag.formula: no visible global function definition for 'model.matrix'
    bag.formula: no visible binding for global variable 'contrasts'
    bagEarth.default : oobFoo: no visible global function definition for
     'predict'
    bagEarth.formula: no visible binding for global variable 'na.omit'
    bagEarth.formula: no visible global function definition for
     'model.response'
    bagEarth.formula: no visible global function definition for
     'model.weights'
    bagEarth.formula: no visible global function definition for
     'model.matrix'
    bagEarth.formula: no visible binding for global variable 'contrasts'
    bagEarthStats : <anonymous>: no visible global function definition for
     'quantile'
    bagFDA.default : oobFoo: no visible global function definition for
     'predict'
    bagFDA.formula: no visible binding for global variable 'na.omit'
    bagFDA.formula: no visible global function definition for
     'model.response'
    bagFDA.formula: no visible global function definition for
     'model.weights'
    bagFDA.formula: no visible global function definition for
     'model.matrix'
    bagFDA.formula: no visible binding for global variable 'contrasts'
    bagImp: no visible global function definition for 'as.formula'
    bt_eval: no visible global function definition for 'qnorm'
    bwplot.diff.resamples : <anonymous>: no visible global function
     definition for 'stack'
    bwplot.diff.resamples: no visible global function definition for
     'as.formula'
    bwplot.resamples : <anonymous>: no visible global function definition
     for 'median'
    bwplot.resamples: no visible global function definition for
     'as.formula'
    ccc: no visible global function definition for 'cov'
    cforestStats: no visible global function definition for 'predict'
    char_mode: no visible global function definition for 'complete.cases'
    checkInstall: no visible global function definition for 'menu'
    checkInstall: no visible global function definition for
     'install.packages'
    class2ind: no visible global function definition for 'model.matrix'
    classDist.default: no visible global function definition for 'quantile'
    classDist.default: no visible global function definition for 'predict'
    classDist.default : getStats: no visible global function definition for
     'cov'
    cluster.resamples: no visible global function definition for 'dist'
    confusionMatrix.table : propCI: no visible global function definition
     for 'binom.test'
    confusionMatrix.table : propTest: no visible global function definition
     for 'binom.test'
    confusionMatrix.table: no visible global function definition for
     'mcnemar.test'
    corr_mat: no visible global function definition for 'cor'
    createDataPartition: no visible global function definition for
     'quantile'
    createFolds: no visible global function definition for 'quantile'
    createModel: no visible global function definition for 'predict'
    densityplot.diff.resamples : <anonymous>: no visible global function
     definition for 'stack'
    densityplot.diff.resamples: no visible global function definition for
     'as.formula'
    densityplot.resamples: no visible global function definition for
     'as.formula'
    densityplot.rfe: no visible global function definition for 'as.formula'
    densityplot.sbf: no visible global function definition for 'as.formula'
    densityplot.train: no visible global function definition for
     'as.formula'
    depth2cp: no visible global function definition for 'approx'
    diff.resamples: no visible binding for global variable 't.test'
    diffmat: no visible global function definition for 'sd'
    dotPlot: no visible global function definition for 'stack'
    dotplot.diff.resamples : <anonymous>: no visible global function
     definition for 'aggregate'
    dotplot.diff.resamples : <anonymous>: no visible binding for global
     variable 'median'
    dotplot.resamples : <anonymous>: no visible global function definition
     for 't.test'
    dotplot.resamples : <anonymous>: no visible global function definition
     for 'median'
    dotplot.resamples: no visible global function definition for
     'as.formula'
    dotplot.resamples : <anonymous>: no visible global function definition
     for 'aggregate'
    dotplot.resamples : <anonymous> : <anonymous>: no visible global
     function definition for 'median'
    dummyVars.default: no visible global function definition for
     'as.formula'
    dummyVars.default: no visible global function definition for
     'model.frame'
    enumLC.formula: no visible global function definition for 'lm'
    evalSummaryFunction: no visible global function definition for 'runif'
    expoTrans.default: no visible global function definition for 'optim'
    expoTrans.numeric: no visible global function definition for 'optim'
    extractProb: no visible global function definition for 'flush.console'
    featurePlot: no visible global function definition for 'stack'
    featurePlot : <anonymous>: no visible global function definition for
     'var'
    filterVarImp : paraFoo: no visible global function definition for
     'coef'
    filterVarImp : paraFoo: no visible global function definition for 'lm'
    filterVarImp : paraFoo: no visible binding for global variable
     'na.omit'
    filterVarImp : nonparaFoo: no visible global function definition for
     'lm'
    filterVarImp : nonparaFoo: no visible binding for global variable
     'na.omit'
    filterVarImp : nonparaFoo: no visible global function definition for
     'loess'
    filterVarImp : nonparaFoo: no visible global function definition for
     'resid'
    fitted.train: no visible global function definition for 'fitted'
    fitted.train: no visible global function definition for 'predict'
    ga_select: no visible global function definition for 'runif'
    gafs.default: no visible global function definition for
     'getFromNamespace'
    gafs.default: no visible global function definition for 'runif'
    gafs_uCrossover: no visible global function definition for 'runif'
    gamFormula: no visible global function definition for 'as.formula'
    gamScores: no visible global function definition for 'anova'
    gamScores: no visible global function definition for 'lm'
    get_averages.rfe : <anonymous>: no visible global function definition
     for 'complete.cases'
    get_averages.sbf : <anonymous>: no visible global function definition
     for 'complete.cases'
    get_averages.train : <anonymous>: no visible global function definition
     for 'complete.cases'
    get_fitness_differences : snr : <anonymous>: no visible global function
     definition for 't.test'
    ggplot.train: no visible global function definition for 'as.formula'
    gls_eval: no visible binding for global variable 'na.omit'
    gls_eval: no visible global function definition for 't.test'
    histogram.rfe: no visible global function definition for 'as.formula'
    histogram.sbf: no visible global function definition for 'as.formula'
    histogram.train: no visible global function definition for 'as.formula'
    icr.default: no visible global function definition for 'predict'
    icr.default: no visible global function definition for 'lm'
    icr.formula: no visible global function definition for 'model.matrix'
    icr.formula: no visible global function definition for 'model.weights'
    icr.formula: no visible global function definition for 'model.response'
    icr.formula: no visible global function definition for '.getXlevels'
    ipredStats : foo: no visible global function definition for 'predict'
    ipredStats : foo: no visible global function definition for 'cor'
    ipredStats: no visible binding for global variable 'sd'
    knn3.formula: no visible global function definition for 'terms'
    knn3.formula: no visible global function definition for 'model.extract'
    knn3.formula: no visible global function definition for 'model.matrix'
    knnreg.formula: no visible global function definition for 'terms'
    knnreg.formula: no visible global function definition for
     'model.extract'
    knnreg.formula: no visible global function definition for
     'model.matrix'
    levelplot.diff.resamples: no visible global function definition for
     'complete.cases'
    long2wide: no visible global function definition for 'reshape'
    looTrainWorkflow: no visible global function definition for 'head'
    make_noise: no visible global function definition for 'rnorm'
    make_noise: no visible global function definition for 'toeplitz'
    manlyLik: no visible global function definition for 'var'
    missing_packages: no visible global function definition for
     'installed.packages'
    mnLogLoss: no visible global function definition for 'getFromNamespace'
    modelCor: no visible global function definition for 'cor'
    nominalTrainWorkflow: no visible global function definition for 'head'
    nominalTrainWorkflow: no visible global function definition for
     'complete.cases'
    oldfilterVarImp : paraFoo: no visible global function definition for
     'coef'
    oldfilterVarImp : paraFoo: no visible global function definition for
     'lm'
    oldfilterVarImp : paraFoo: no visible binding for global variable
     'na.omit'
    oldfilterVarImp : nonparaFoo: no visible global function definition for
     'lm'
    oldfilterVarImp : nonparaFoo: no visible binding for global variable
     'na.omit'
    oldfilterVarImp : nonparaFoo: no visible global function definition for
     'loess'
    oldfilterVarImp : nonparaFoo: no visible global function definition for
     'resid'
    oob_pred.list: no visible global function definition for 'reshape'
    panel.needle: no visible global function definition for 'extendrange'
    parallelplot.resamples: no visible binding for global variable 'median'
    partRuleSummary: no visible global function definition for
     'capture.output'
    pcaNNet.default: no visible global function definition for 'predict'
    pcaNNet.formula: no visible global function definition for
     'model.matrix'
    pcaNNet.formula: no visible global function definition for
     'model.weights'
    pcaNNet.formula: no visible global function definition for
     'model.response'
    pcaNNet.formula: no visible global function definition for
     '.getXlevels'
    pickVars: no visible binding for global variable 'var'
    plot.gafs: no visible global function definition for 'update'
    plot.prcomp.resamples: no visible global function definition for
     'extendrange'
    plot.rfe: no visible global function definition for 'as.formula'
    plot.safs: no visible global function definition for 'update'
    plot.train: no visible global function definition for 'as.formula'
    plot.varImp.train: no visible global function definition for 'stack'
    plot.varImp.train: no visible global function definition for
     'as.formula'
    plotClassProbs: no visible global function definition for 'as.formula'
    plotObsVsPred: no visible global function definition for 'stack'
    plotObsVsPred: no visible global function definition for 'extendrange'
    plotRef: no visible global function definition for 'extendrange'
    plotRef: no visible global function definition for 'approx'
    plsda.default : makeModels: no visible global function definition for
     'predict'
    plsda.default: no visible global function definition for 'predict'
    postResample: no visible global function definition for 'cor'
    preProcess.default: no visible global function definition for 'predict'
    preProcess.default: no visible binding for global variable 'sd'
    preProcess.default: no visible binding for global variable 'median'
    preProcess.default: no visible global function definition for
     'complete.cases'
    predict.avNNet: no visible binding for global variable 'fitted.values'
    predict.avNNet: no visible global function definition for
     'fitted.values'
    predict.avNNet: no visible global function definition for
     'delete.response'
    predict.avNNet: no visible global function definition for 'model.frame'
    predict.avNNet: no visible binding for global variable 'na.omit'
    predict.avNNet: no visible global function definition for
     '.checkMFClasses'
    predict.avNNet: no visible global function definition for
     'model.matrix'
    predict.avNNet: no visible binding for global variable 'predict'
    predict.avNNet: no visible global function definition for 'predict'
    predict.bagEarth : <anonymous>: no visible global function definition
     for 'predict'
    predict.bagFDA : getTrainPred: no visible global function definition
     for 'predict'
    predict.bagFDA : <anonymous>: no visible global function definition for
     'predict'
    predict.classDist: no visible global function definition for 'predict'
    predict.classDist : pred: no visible global function definition for
     'mahalanobis'
    predict.dummyVars: no visible binding for global variable 'na.pass'
    predict.dummyVars: no visible global function definition for
     'delete.response'
    predict.dummyVars: no visible global function definition for
     'model.frame'
    predict.dummyVars: no visible global function definition for
     'model.matrix'
    predict.icr: no visible global function definition for 'fitted'
    predict.icr: no visible global function definition for
     'delete.response'
    predict.icr: no visible global function definition for 'model.frame'
    predict.icr: no visible binding for global variable 'na.omit'
    predict.icr: no visible global function definition for
     '.checkMFClasses'
    predict.icr: no visible global function definition for 'model.matrix'
    predict.icr: no visible global function definition for 'predict'
    predict.knn3: no visible global function definition for 'model.frame'
    predict.knn3: no visible global function definition for 'as.formula'
    predict.knn3: no visible global function definition for
     'delete.response'
    predict.knn3: no visible global function definition for 'model.matrix'
    predict.knnreg: no visible global function definition for 'model.frame'
    predict.knnreg: no visible global function definition for 'as.formula'
    predict.knnreg: no visible global function definition for
     'delete.response'
    predict.knnreg: no visible global function definition for
     'model.matrix'
    predict.list: no visible binding for global variable 'predict'
    predict.pcaNNet: no visible global function definition for 'fitted'
    predict.pcaNNet: no visible global function definition for
     'delete.response'
    predict.pcaNNet: no visible global function definition for
     'model.frame'
    predict.pcaNNet: no visible binding for global variable 'na.omit'
    predict.pcaNNet: no visible global function definition for
     '.checkMFClasses'
    predict.pcaNNet: no visible global function definition for
     'model.matrix'
    predict.pcaNNet: no visible global function definition for 'predict'
    predict.plsda: no visible global function definition for 'predict'
    predict.preProcess: no visible global function definition for 'predict'
    predict.preProcess: no visible global function definition for
     'complete.cases'
    predict.rfe: no visible global function definition for
     'delete.response'
    predict.rfe: no visible global function definition for 'model.frame'
    predict.rfe: no visible binding for global variable 'na.omit'
    predict.rfe: no visible global function definition for
     '.checkMFClasses'
    predict.rfe: no visible global function definition for 'model.matrix'
    predict.sbf: no visible global function definition for
     'delete.response'
    predict.sbf: no visible global function definition for 'model.frame'
    predict.sbf: no visible binding for global variable 'na.omit'
    predict.sbf: no visible global function definition for
     '.checkMFClasses'
    predict.sbf: no visible global function definition for 'model.matrix'
    predict.splsda: no visible global function definition for 'predict'
    predict.train: no visible binding for global variable 'na.omit'
    predict.train: no visible global function definition for 'update'
    predict.train: no visible global function definition for
     'delete.response'
    predict.train: no visible global function definition for 'model.frame'
    predict.train: no visible global function definition for
     '.checkMFClasses'
    predict.train: no visible global function definition for 'model.matrix'
    predictionFunction: no visible global function definition for 'predict'
    print.gafs: no visible global function definition for
     'getFromNamespace'
    print.icr: no visible global function definition for 'coef'
    print.safs: no visible global function definition for
     'getFromNamespace'
    print.summary.bagEarth : <anonymous>: no visible global function
     definition for 'quantile'
    print.summary.bagFDA : <anonymous>: no visible global function
     definition for 'quantile'
    probFunction: no visible global function definition for 'predict'
    process_diffs: no visible global function definition for 'reshape'
    resampleSummary: no visible binding for global variable 'sd'
    residuals.train: no visible global function definition for 'residuals'
    residuals.train: no visible global function definition for 'predict'
    rfe.default: no visible global function definition for 'runif'
    rfe.default: no visible global function definition for 'predict'
    rfe.formula: no visible global function definition for 'model.matrix'
    rfe.formula: no visible global function definition for 'model.response'
    rfe.formula: no visible global function definition for '.getXlevels'
    rfeIter: no visible global function definition for 'flush.console'
    rfeIter: no visible global function definition for 'complete.cases'
    rfeIter: no visible binding for global variable 'var'
    ripperRuleSummary: no visible global function definition for
     'capture.output'
    sa_select: no visible global function definition for 'runif'
    safs.default: no visible global function definition for
     'getFromNamespace'
    safs.default: no visible global function definition for 'runif'
    sbf.default: no visible global function definition for 'runif'
    sbf.default: no visible global function definition for 'predict'
    sbf.formula: no visible global function definition for 'model.matrix'
    sbf.formula: no visible global function definition for 'model.response'
    sbf.formula: no visible global function definition for '.getXlevels'
    sensitivity.default: no visible global function definition for
     'complete.cases'
    seq_eval: no visible global function definition for 'lm'
    seq_eval: no visible global function definition for 'pt'
    seq_eval: no visible global function definition for 'coef'
    seq_eval: no visible global function definition for 't.test'
    smootherFormula: no visible global function definition for 'as.formula'
    sortImp: no visible global function definition for 'runif'
    specificity.default: no visible global function definition for
     'complete.cases'
    splom.resamples: no visible global function definition for
     'extendrange'
    splsda.default : makeModels: no visible global function definition for
     'predict'
    splsda.default: no visible global function definition for 'predict'
    stripplot.rfe: no visible global function definition for 'as.formula'
    stripplot.train: no visible global function definition for 'as.formula'
    summary.bag : <anonymous>: no visible global function definition for
     'quantile'
    summary.bagEarth : <anonymous>: no visible global function definition
     for 'quantile'
    summary.bagFDA : <anonymous>: no visible global function definition for
     'quantile'
    summary.diff.resamples: no visible global function definition for
     'p.adjust'
    train.default: no visible global function definition for
     'flush.console'
    train.default: no visible global function definition for 'predict'
    train.default: no visible global function definition for 'extendrange'
    train.default: no visible global function definition for 'object.size'
    train.formula: no visible binding for global variable 'na.fail'
    train.formula: no visible global function definition for 'model.matrix'
    train.formula: no visible global function definition for
     'model.response'
    train.formula: no visible global function definition for
     'model.weights'
    train.formula: no visible global function definition for '.getXlevels'
    twoClassSim: no visible global function definition for 'rnorm'
    twoClassSim: no visible global function definition for 'runif'
    twoClassSim: no visible global function definition for 'toeplitz'
    twoClassSim: no visible global function definition for 'binomial'
    varImp.rfe: no visible binding for global variable 'var'
    xyplot.calibration: no visible global function definition for
     'extendrange'
    xyplot.calibration: no visible global function definition for
     'as.formula'
    xyplot.lift: no visible global function definition for 'extendrange'
    xyplot.lift: no visible global function definition for 'as.formula'
    xyplot.resamples: no visible global function definition for
     'extendrange'
    xyplot.resamples : prepanel.ci: no visible global function definition
     for 'extendrange'
    xyplot.resamples : <anonymous>: no visible global function definition
     for 't.test'
    xyplot.rfe: no visible global function definition for 'as.formula'
    xyplot.train: no visible global function definition for 'as.formula'
    Undefined global functions or variables:
     .checkMFClasses .getXlevels aggregate anova approx as.formula
     binom.test binomial capture.output coef complete.cases contrasts cor
     cov delete.response dist extendrange fitted fitted.values
     flush.console getFromNamespace head install.packages
     installed.packages lm loess mahalanobis mcnemar.test median menu
     model.extract model.frame model.matrix model.response model.weights
     na.fail na.omit na.pass object.size optim p.adjust predict pt qnorm
     quantile rbinom reshape resid residuals rnorm runif sd stack t.test
     terms toeplitz update var
Flavor: r-devel-windows-ix86+x86_64