CRAN Package Check Results for Package catnet

Last updated on 2015-07-05 08:47:10.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.14.8 6.09 29.29 35.38 NOTE --no-vignettes
r-devel-linux-x86_64-debian-gcc 1.14.8 10.28 29.18 39.46 NOTE --no-vignettes
r-devel-linux-x86_64-fedora-clang 1.14.8 103.97 NOTE
r-devel-linux-x86_64-fedora-gcc 1.14.8 110.29 NOTE
r-devel-osx-x86_64-clang 1.14.8 1860.33 ERROR
r-devel-windows-ix86+x86_64 1.14.8 44.00 0.00 44.00 ERROR
r-patched-linux-x86_64 1.14.8 10.46 28.64 39.10 OK --no-vignettes
r-patched-solaris-sparc 1.14.8 1002.40 OK
r-patched-solaris-x86 1.14.8 384.50 OK
r-release-linux-x86_64 1.14.8 10.90 29.29 40.18 OK --no-vignettes
r-release-osx-x86_64-mavericks 1.14.8 OK
r-release-windows-ix86+x86_64 1.14.8 41.00 150.00 191.00 OK
r-oldrel-windows-ix86+x86_64 1.14.8 55.00 237.00 292.00 OK

Check Details

Version: 1.14.8
Flags: --no-vignettes
Check: R code for possible problems
Result: NOTE
    cnCatnetFromSif: no visible global function definition for ‘read.table’
    cnCatnetFromSif: no visible global function definition for ‘read.csv’
    cnDiscretize: no visible global function definition for ‘quantile’
    cnGMM: no visible global function definition for ‘quantile’
    cnQMM: no visible global function definition for ‘quantile’
    graph2catnet: no visible global function definition for ‘slotNames’
    listGraphEdges: no visible global function definition for ‘setNames’
    cnParents,catNetwork-vector: no visible global function definition for
     ‘setNames’
    cnPearsonTest,catNetwork: no visible global function definition for
     ‘rbinom’
    cnPlot,catNetworkEvaluate: no visible global function definition for
     ‘par’
    cnPlot,catNetworkEvaluate: no visible global function definition for
     ‘plot’
    Undefined global functions or variables:
     par plot quantile rbinom read.csv read.table setNames slotNames
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.14.8
Check: R code for possible problems
Result: NOTE
    cnCatnetFromSif: no visible global function definition for ‘read.table’
    cnCatnetFromSif: no visible global function definition for ‘read.csv’
    cnDiscretize: no visible global function definition for ‘quantile’
    cnGMM: no visible global function definition for ‘quantile’
    cnQMM: no visible global function definition for ‘quantile’
    graph2catnet: no visible global function definition for ‘slotNames’
    listGraphEdges: no visible global function definition for ‘setNames’
    cnParents,catNetwork-vector: no visible global function definition for
     ‘setNames’
    cnPearsonTest,catNetwork: no visible global function definition for
     ‘rbinom’
    cnPlot,catNetworkEvaluate: no visible global function definition for
     ‘par’
    cnPlot,catNetworkEvaluate: no visible global function definition for
     ‘plot’
    Undefined global functions or variables:
     par plot quantile rbinom read.csv read.table setNames slotNames
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.14.8
Check: running R code from vignettes
Result: ERROR
    Errors in running code in vignettes:
    when running code in ‘catnet.Rnw’
     ...
    > fscore2 <- NULL
    
    > for (ntrials in 1:5) {
    + numiter <- 60
    + sares1 <- cnSearchSA(data = ps, perturbations = pert, maxParentSet = 2,
    + parentSizes = NU .... [TRUNCATED]
    Warning: stack imbalance in '.Call', 58 then 57
    Warning: stack imbalance in '<-', 56 then 55
    
    ... incomplete output. Crash?
Flavor: r-devel-osx-x86_64-clang

Version: 1.14.8
Check: running R code from vignettes
Result: ERROR
    Check process probably crashed or hung up for 20 minutes ... killed
    Most likely this happened in the example checks (?),
    if not, ignore the following last lines of example output:
    
    ======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-devel-windows-ix86+x86_64